RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 DEFB113Q30KQ7 82 aa9.33□□□□□ -0.92
VRK3-209ENST00000594948 IGHV3OR16-9A0A0B4J2B5 98 aa9.32□□□□□ -0.92
VRK3-209ENST00000594948 GIG44P09565 113 aaPredicted RBP9.32□□□□□ -0.92
VRK3-209ENST00000594948 OBSCN-AS1Q96MR7 158 aa9.32□□□□□ -0.92
VRK3-209ENST00000594948 CHD8Q9HCK8 2581 aa9.32□□□□□ -0.92
VRK3-209ENST00000594948 TRGV2A0A075B6R0 118 aa9.31□□□□□ -0.92
VRK3-209ENST00000594948 A0A087WZ39 114 aa9.31□□□□□ -0.92
VRK3-209ENST00000594948 DNAL4O96015 105 aa9.31□□□□□ -0.92
VRK3-209ENST00000594948 SMIM11BQ8TCY0 68 aa9.31□□□□□ -0.92
VRK3-209ENST00000594948 CACNA1AO00555 2505 aa9.31□□□□□ -0.92
VRK3-209ENST00000594948 CREBBPQ92793 2442 aa9.31□□□□□ -0.92
VRK3-209ENST00000594948 TRBV6-8A0A0A6YYG3 113 aa9.31□□□□□ -0.92
VRK3-209ENST00000594948 CCL18P55774 89 aa9.31□□□□□ -0.92
VRK3-209ENST00000594948 UQCRQO14949 82 aa9.3□□□□□ -0.92
VRK3-209ENST00000594948 LINC00158P58513 81 aa9.3□□□□□ -0.92
VRK3-209ENST00000594948 C3orf22Q8N5N4 141 aa9.3□□□□□ -0.92
VRK3-209ENST00000594948 TRGV4A0A0C4DH28 118 aa9.29□□□□□ -0.92
VRK3-209ENST00000594948 GAGE2AQ6NT46 116 aa9.29□□□□□ -0.92
VRK3-209ENST00000594948 Q9HAA7 133 aa9.29□□□□□ -0.92
VRK3-209ENST00000594948 TOMM7Q9P0U1 55 aa9.29□□□□□ -0.92
VRK3-209ENST00000594948 PKD1L2Q7Z442 2459 aa9.29□□□□□ -0.92
VRK3-209ENST00000594948 LOC100131303A0A0U1RQF7 123 aa9.28□□□□□ -0.92
VRK3-209ENST00000594948 LY6G6DO95868 133 aa9.28□□□□□ -0.92
VRK3-209ENST00000594948 HIST1H4AP62805 103 aaKnown RBP9.28□□□□□ -0.92
VRK3-209ENST00000594948 LINC01561Q8N1V8 128 aa9.28□□□□□ -0.92
VRK3-209ENST00000594948 CSNK1G2-AS1Q8NCQ2 148 aa9.28□□□□□ -0.92
VRK3-209ENST00000594948 IGLV4-60A0A075B6I1 120 aa9.28□□□□□ -0.92
VRK3-209ENST00000594948 DNAJC9-AS1A6NH13 148 aa9.28□□□□□ -0.92
VRK3-209ENST00000594948 FHL2Q14192 279 aa9.28□□□□□ -0.92
VRK3-209ENST00000594948 CRYBG3Q68DQ2 2970 aa9.27□□□□□ -0.93
VRK3-209ENST00000594948 A0A087WYN8 130 aa9.27□□□□□ -0.93
VRK3-209ENST00000594948 LINC00526Q96FQ7 95 aa9.27□□□□□ -0.93
VRK3-209ENST00000594948 USP9XQ93008 2570 aaPredicted RBP9.27□□□□□ -0.93
VRK3-209ENST00000594948 CELSR2Q9HCU4 2923 aa9.27□□□□□ -0.93
VRK3-209ENST00000594948 Q6JHZ5 121 aa9.26□□□□□ -0.93
VRK3-209ENST00000594948 C11orf44Q8N8P7 122 aa9.26□□□□□ -0.93
VRK3-209ENST00000594948 C19orf73Q9NVV2 129 aa9.26□□□□□ -0.93
VRK3-209ENST00000594948 KLK5Q9Y337 293 aaPredicted RBP9.26□□□□□ -0.93
VRK3-209ENST00000594948 A0A1B0GX51 115 aa9.26□□□□□ -0.93
VRK3-209ENST00000594948 ATOX1O00244 68 aa9.26□□□□□ -0.93
VRK3-209ENST00000594948 IGLV1-51P01701 117 aa9.26□□□□□ -0.93
VRK3-209ENST00000594948 C9orf153Q5TBE3 101 aa9.26□□□□□ -0.93
VRK3-209ENST00000594948 SMIM20Q8N5G0 67 aa9.26□□□□□ -0.93
VRK3-209ENST00000594948 LINC00959A0A1B0GUT2 108 aa9.25□□□□□ -0.93
VRK3-209ENST00000594948 A0A1W2PRX2 142 aa9.25□□□□□ -0.93
VRK3-209ENST00000594948 KRTAP10-9P60411 292 aa9.25□□□□□ -0.93
VRK3-209ENST00000594948 KRTAP1-3Q8IUG1 177 aa9.25□□□□□ -0.93
VRK3-209ENST00000594948 COX7CP15954 63 aa9.24□□□□□ -0.93
VRK3-209ENST00000594948 LINC00167Q96N53 147 aa9.24□□□□□ -0.93
VRK3-209ENST00000594948 Q8IZM0 81 aa9.24□□□□□ -0.93
VRK3-209ENST00000594948 KIR2DL5BQ8NHK3 375 aa9.24□□□□□ -0.93
VRK3-209ENST00000594948 C16orf95Q9H693 158 aa9.24□□□□□ -0.93
VRK3-209ENST00000594948 COL12A1Q99715 3063 aa9.23□□□□□ -0.93
VRK3-209ENST00000594948 A0A1B0GUV1 79 aa9.23□□□□□ -0.93
VRK3-209ENST00000594948 LECT2O14960 151 aa9.23□□□□□ -0.93
VRK3-209ENST00000594948 PAX4O43316 350 aa9.23□□□□□ -0.93
VRK3-209ENST00000594948 LINC00612Q8N6U2 182 aa9.23□□□□□ -0.93
VRK3-209ENST00000594948 CFAP46Q8IYW2 2715 aa9.23□□□□□ -0.93
VRK3-209ENST00000594948 USP9YO00507 2555 aaPredicted RBP9.22□□□□□ -0.93
VRK3-209ENST00000594948 IGKV3OR2-268A0A0C4DH90 116 aa9.22□□□□□ -0.93
VRK3-209ENST00000594948 RPL35AP18077 110 aaKnown RBP9.22□□□□□ -0.93
VRK3-209ENST00000594948 ORMDL1Q9P0S3 153 aa9.22□□□□□ -0.93
VRK3-209ENST00000594948 MXRA5Q9NR99 2828 aa9.22□□□□□ -0.93
VRK3-209ENST00000594948 PFN2P35080 140 aa9.21□□□□□ -0.93
VRK3-209ENST00000594948 SS18Q15532 418 aa9.21□□□□□ -0.93
VRK3-209ENST00000594948 C6orf226Q5I0X4 101 aa9.21□□□□□ -0.93
VRK3-209ENST00000594948 C14orf132Q9NPU4 83 aa9.21□□□□□ -0.93
VRK3-209ENST00000594948 FLNCQ14315 2725 aa9.21□□□□□ -0.93
VRK3-209ENST00000594948 CRYGAP11844 174 aa9.21□□□□□ -0.94
VRK3-209ENST00000594948 C2orf48Q96LS8 159 aa9.21□□□□□ -0.94
VRK3-209ENST00000594948 NDUFC2O95298 119 aa9.2□□□□□ -0.94
VRK3-209ENST00000594948 C9orf129Q5T035 196 aaKnown RBP9.2□□□□□ -0.94
VRK3-209ENST00000594948 OR13C6PQ8NH95 151 aa9.2□□□□□ -0.94
VRK3-209ENST00000594948 WFDC10AQ9H1F0 79 aa9.2□□□□□ -0.94
VRK3-209ENST00000594948 ESM1Q9NQ30 184 aa9.2□□□□□ -0.94
VRK3-209ENST00000594948 RPL18AQ02543 176 aaKnown RBP9.19□□□□□ -0.94
VRK3-209ENST00000594948 LINC00846Q9NV44 126 aa9.19□□□□□ -0.94
VRK3-209ENST00000594948 UTP20O75691 2785 aaKnown RBP9.19□□□□□ -0.94
VRK3-209ENST00000594948 ZANQ9Y493 2812 aa9.19□□□□□ -0.94
VRK3-209ENST00000594948 JMJD7-PLA2G4BH0Y9G9 81 aa9.18□□□□□ -0.94
VRK3-209ENST00000594948 CCKP06307 115 aa9.18□□□□□ -0.94
VRK3-209ENST00000594948 COX17Q14061 63 aa9.18□□□□□ -0.94
VRK3-209ENST00000594948 S100A7L2Q5SY68 101 aa9.18□□□□□ -0.94
VRK3-209ENST00000594948 LINC01006Q8NI28 216 aa9.18□□□□□ -0.94
VRK3-209ENST00000594948 IGSF10Q6WRI0 2623 aa9.18□□□□□ -0.94
VRK3-209ENST00000594948 RNASE1P07998 156 aaKnown RBP9.17□□□□□ -0.94
VRK3-209ENST00000594948 MAP1AP78559 2803 aaPredicted RBP9.17□□□□□ -0.94
VRK3-209ENST00000594948 FBN2P35556 2912 aa9.16□□□□□ -0.94
VRK3-209ENST00000594948 WNK1Q9H4A3 2382 aa9.16□□□□□ -0.94
VRK3-209ENST00000594948 NCR3O14931 201 aa9.15□□□□□ -0.94
VRK3-209ENST00000594948 GYPEP15421 78 aa9.15□□□□□ -0.94
VRK3-209ENST00000594948 ATP5EP2Q5VTU8 51 aa9.15□□□□□ -0.94
VRK3-209ENST00000594948 C3orf56Q8N813 242 aa9.15□□□□□ -0.94
VRK3-209ENST00000594948 MYO9AB2RTY4 2548 aa9.15□□□□□ -0.95
VRK3-209ENST00000594948 SMIM9A6NGZ8 99 aa9.15□□□□□ -0.95
VRK3-209ENST00000594948 TMEM256-PLSCR3K7ERE1 68 aa9.15□□□□□ -0.95
VRK3-209ENST00000594948 PLA2G2AP14555 144 aa9.15□□□□□ -0.95
VRK3-209ENST00000594948 XCL1P47992 114 aa9.15□□□□□ -0.95
VRK3-209ENST00000594948 NANOS2P60321 138 aaKnown RBP9.15□□□□□ -0.95
VRK3-209ENST00000594948 Q8N814 137 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms