RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 FBN3Q75N90 2809 aa13.09□□□□□ -0.31
HDAC5-212ENST00000593013 MEGF8Q7Z7M0 2845 aa13.08□□□□□ -0.32
HDAC5-212ENST00000593013 PRO0255Q9UI72 69 aa13.08□□□□□ -0.32
HDAC5-212ENST00000593013 NDUFA1O15239 70 aa13.08□□□□□ -0.32
HDAC5-212ENST00000593013 TIMM17BO60830 172 aa13.08□□□□□ -0.32
HDAC5-212ENST00000593013 MIFP14174 115 aa13.08□□□□□ -0.32
HDAC5-212ENST00000593013 SPANXDQ9BXN6 97 aa13.08□□□□□ -0.32
HDAC5-212ENST00000593013 SPANXCQ9NY87 97 aa13.08□□□□□ -0.32
HDAC5-212ENST00000593013 TRAV13-1A0A0B4J241 112 aa13.07□□□□□ -0.32
HDAC5-212ENST00000593013 IGHV4-28A0A0C4DH34 117 aa13.07□□□□□ -0.32
HDAC5-212ENST00000593013 CFC1BP0CG36 223 aa13.07□□□□□ -0.32
HDAC5-212ENST00000593013 CFC1P0CG37 223 aa13.07□□□□□ -0.32
HDAC5-212ENST00000593013 PGPEP1Q9NXJ5 209 aa13.07□□□□□ -0.32
HDAC5-212ENST00000593013 SMIM1B2RUZ4 78 aa13.06□□□□□ -0.32
HDAC5-212ENST00000593013 F5H768 121 aa13.06□□□□□ -0.32
HDAC5-212ENST00000593013 GYPEP15421 78 aa13.06□□□□□ -0.32
HDAC5-212ENST00000593013 RPL24P83731 157 aaKnown RBP13.06□□□□□ -0.32
HDAC5-212ENST00000593013 Q8NAQ8 132 aa13.06□□□□□ -0.32
HDAC5-212ENST00000593013 TSPAN13O95857 204 aa13.05□□□□□ -0.32
HDAC5-212ENST00000593013 GAGE6Q13070 117 aa13.05□□□□□ -0.32
HDAC5-212ENST00000593013 ATP6V0E2Q8NHE4 81 aa13.05□□□□□ -0.32
HDAC5-212ENST00000593013 RNF183Q96D59 192 aa13.05□□□□□ -0.32
HDAC5-212ENST00000593013 MUSTN1Q8IVN3 82 aa13.05□□□□□ -0.32
HDAC5-212ENST00000593013 A0A0B4J2C4 111 aa13.04□□□□□ -0.32
HDAC5-212ENST00000593013 A4D1N5 150 aa13.04□□□□□ -0.32
HDAC5-212ENST00000593013 APOMO95445 188 aa13.04□□□□□ -0.32
HDAC5-212ENST00000593013 CHCHD5Q9BSY4 110 aa13.03□□□□□ -0.32
HDAC5-212ENST00000593013 MIAQ16674 131 aa13.02□□□□□ -0.32
HDAC5-212ENST00000593013 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.02□□□□□ -0.33
HDAC5-212ENST00000593013 ADAMTSL4-AS1Q5T5F5 129 aa13.02□□□□□ -0.33
HDAC5-212ENST00000593013 PRO1854Q9UHT4 67 aa13.02□□□□□ -0.33
HDAC5-212ENST00000593013 IGLV4-60A0A075B6I1 120 aa13.01□□□□□ -0.33
HDAC5-212ENST00000593013 EIF4EBP3O60516 100 aaPredicted RBP13.01□□□□□ -0.33
HDAC5-212ENST00000593013 PRKDCP78527 4128 aaKnown RBP13□□□□□ -0.33
HDAC5-212ENST00000593013 PAX4O43316 350 aa13□□□□□ -0.33
HDAC5-212ENST00000593013 DAD1P61803 113 aa13□□□□□ -0.33
HDAC5-212ENST00000593013 A0A1B0GUV1 79 aa12.99□□□□□ -0.33
HDAC5-212ENST00000593013 MRAPQ8TCY5 172 aa12.99□□□□□ -0.33
HDAC5-212ENST00000593013 DEFB4AO15263 64 aa12.99□□□□□ -0.33
HDAC5-212ENST00000593013 IFITM1P13164 125 aa12.99□□□□□ -0.33
HDAC5-212ENST00000593013 DEFB121Q5J5C9 76 aa12.99□□□□□ -0.33
HDAC5-212ENST00000593013 LYRM7Q5U5X0 104 aa12.99□□□□□ -0.33
HDAC5-212ENST00000593013 ZNF625Q96I27 306 aaPredicted RBP12.99□□□□□ -0.33
HDAC5-212ENST00000593013 TENM3Q9P273 2699 aa12.99□□□□□ -0.33
HDAC5-212ENST00000593013 OCIAD2Q56VL3 154 aa12.98□□□□□ -0.33
HDAC5-212ENST00000593013 CELA1Q9UNI1 258 aa12.98□□□□□ -0.33
HDAC5-212ENST00000593013 TRAV26-1A0A087WT03 109 aa12.97□□□□□ -0.33
HDAC5-212ENST00000593013 IGHV3-33P01772 117 aa12.97□□□□□ -0.33
HDAC5-212ENST00000593013 ATP5G1P05496 136 aa12.97□□□□□ -0.33
HDAC5-212ENST00000593013 SPART-AS1P0CW21 52 aa12.97□□□□□ -0.33
HDAC5-212ENST00000593013 Q9H8V8 135 aa12.97□□□□□ -0.33
HDAC5-212ENST00000593013 HERV-K104P63124 156 aa12.96□□□□□ -0.34
HDAC5-212ENST00000593013 DNAH9Q9NYC9 4486 aa12.96□□□□□ -0.34
HDAC5-212ENST00000593013 IGHV3OR16-9A0A0B4J2B5 98 aa12.95□□□□□ -0.34
HDAC5-212ENST00000593013 F8W1H4 67 aa12.95□□□□□ -0.34
HDAC5-212ENST00000593013 CIRBPQ14011 172 aaKnown RBP12.95□□□□□ -0.34
HDAC5-212ENST00000593013 TEX48A0A1B0GUV7 120 aa12.94□□□□□ -0.34
HDAC5-212ENST00000593013 H3BMG7 143 aa12.94□□□□□ -0.34
HDAC5-212ENST00000593013 RBX1P62877 108 aa12.94□□□□□ -0.34
HDAC5-212ENST00000593013 COL7A1Q02388 2944 aa12.94□□□□□ -0.34
HDAC5-212ENST00000593013 PRO0461Q9UI25 63 aa12.94□□□□□ -0.34
HDAC5-212ENST00000593013 PRSS2P07478 247 aa12.93□□□□□ -0.34
HDAC5-212ENST00000593013 PPDPFQ9H3Y8 114 aa12.93□□□□□ -0.34
HDAC5-212ENST00000593013 HUWE1Q7Z6Z7 4374 aaKnown RBP12.93□□□□□ -0.34
HDAC5-212ENST00000593013 A0A087WZ39 114 aa12.93□□□□□ -0.34
HDAC5-212ENST00000593013 LINC00959A0A1B0GUT2 108 aa12.93□□□□□ -0.34
HDAC5-212ENST00000593013 ERG28Q9UKR5 140 aa12.93□□□□□ -0.34
HDAC5-212ENST00000593013 TRBV20-1A0A075B6N2 111 aa12.91□□□□□ -0.34
HDAC5-212ENST00000593013 LOC107984156A0A0G2JMH3 177 aa12.91□□□□□ -0.34
HDAC5-212ENST00000593013 ARL17AQ8IVW1 177 aa12.91□□□□□ -0.34
HDAC5-212ENST00000593013 COX7B2Q8TF08 81 aa12.91□□□□□ -0.34
HDAC5-212ENST00000593013 TM2D3Q9BRN9 247 aa12.91□□□□□ -0.34
HDAC5-212ENST00000593013 K7ERU9 68 aa12.91□□□□□ -0.34
HDAC5-212ENST00000593013 SH2D6Q7Z4S9 175 aa12.91□□□□□ -0.34
HDAC5-212ENST00000593013 COPS9Q8WXC6 57 aa12.9□□□□□ -0.34
HDAC5-212ENST00000593013 RETNQ9HD89 108 aa12.9□□□□□ -0.34
HDAC5-212ENST00000593013 A0A096LPF7 62 aa12.89□□□□□ -0.35
HDAC5-212ENST00000593013 IGKV3OR2-268A0A0C4DH90 116 aa12.89□□□□□ -0.35
HDAC5-212ENST00000593013 LINC01561Q8N1V8 128 aa12.89□□□□□ -0.35
HDAC5-212ENST00000593013 LINC00308Q8TCZ7 52 aa12.89□□□□□ -0.35
HDAC5-212ENST00000593013 B9D2Q9BPU9 175 aa12.89□□□□□ -0.35
HDAC5-212ENST00000593013 TMEM262E9PQX1 116 aa12.88□□□□□ -0.35
HDAC5-212ENST00000593013 MRPL23Q16540 153 aaKnown RBP12.88□□□□□ -0.35
HDAC5-212ENST00000593013 SS18Q15532 418 aa12.88□□□□□ -0.35
HDAC5-212ENST00000593013 TCL1BO95988 128 aa12.87□□□□□ -0.35
HDAC5-212ENST00000593013 PSMB2P49721 201 aa12.87□□□□□ -0.35
HDAC5-212ENST00000593013 WFDC2Q14508 124 aa12.87□□□□□ -0.35
HDAC5-212ENST00000593013 SFTA2Q6UW10 78 aa12.87□□□□□ -0.35
HDAC5-212ENST00000593013 DAND5Q8N907 189 aa12.87□□□□□ -0.35
HDAC5-212ENST00000593013 TRBV30A0A0K0K1B3 111 aa12.86□□□□□ -0.35
HDAC5-212ENST00000593013 NPC2P61916 151 aa12.86□□□□□ -0.35
HDAC5-212ENST00000593013 MEIG1Q5JSS6 88 aa12.86□□□□□ -0.35
HDAC5-212ENST00000593013 SPATA25Q9BR10 227 aa12.86□□□□□ -0.35
HDAC5-212ENST00000593013 ICOSQ9Y6W8 199 aa12.86□□□□□ -0.35
HDAC5-212ENST00000593013 STAB2Q8WWQ8 2551 aa12.86□□□□□ -0.35
HDAC5-212ENST00000593013 LELP1Q5T871 98 aa12.85□□□□□ -0.35
HDAC5-212ENST00000593013 SOSTDC1Q6X4U4 206 aa12.84□□□□□ -0.35
HDAC5-212ENST00000593013 C11orf68Q9H3H3 251 aaKnown RBP12.84□□□□□ -0.35
HDAC5-212ENST00000593013 SCGB1C2P0DMR2 95 aa12.83□□□□□ -0.36
HDAC5-212ENST00000593013 C5orf38Q86SI9 138 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms