RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 PPDPFQ9H3Y8 114 aa10.17□□□□□ -0.78
RANBP3-229ENST00000592771 Q9UF83 564 aa10.17□□□□□ -0.78
RANBP3-229ENST00000592771 NOTCH3Q9UM47 2321 aa10.17□□□□□ -0.78
RANBP3-229ENST00000592771 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.17□□□□□ -0.78
RANBP3-229ENST00000592771 CDKN2A-AS1Q9UH64 79 aa10.17□□□□□ -0.78
RANBP3-229ENST00000592771 TRGV1A0A0A0MS02 117 aa10.16□□□□□ -0.78
RANBP3-229ENST00000592771 DAZ4Q86SG3 579 aaKnown RBP10.16□□□□□ -0.78
RANBP3-229ENST00000592771 C16orf74Q96GX8 76 aa10.16□□□□□ -0.78
RANBP3-229ENST00000592771 TMEM101Q96IK0 257 aa10.16□□□□□ -0.78
RANBP3-229ENST00000592771 DAZ3Q9NR90 486 aaKnown RBP10.16□□□□□ -0.78
RANBP3-229ENST00000592771 RPL36AP83881 106 aaKnown RBP10.15□□□□□ -0.78
RANBP3-229ENST00000592771 Q6ZTI0 123 aa10.15□□□□□ -0.78
RANBP3-229ENST00000592771 SPATA3Q8NHX4 192 aa10.15□□□□□ -0.78
RANBP3-229ENST00000592771 NTN5Q8WTR8 489 aaPredicted RBP10.15□□□□□ -0.78
RANBP3-229ENST00000592771 RPL36ALQ969Q0 106 aaKnown RBP10.15□□□□□ -0.78
RANBP3-229ENST00000592771 TRAV4A0A0B4J268 109 aa10.15□□□□□ -0.79
RANBP3-229ENST00000592771 C9orf66Q5T8R8 295 aa10.15□□□□□ -0.79
RANBP3-229ENST00000592771 IGHV3-38A0A0C4DH36 116 aa10.14□□□□□ -0.79
RANBP3-229ENST00000592771 LST1O00453 97 aa10.14□□□□□ -0.79
RANBP3-229ENST00000592771 OVOL2Q9BRP0 275 aa10.14□□□□□ -0.79
RANBP3-229ENST00000592771 C2orf82Q6UX34 121 aa10.13□□□□□ -0.79
RANBP3-229ENST00000592771 UBE2WQ96B02 151 aa10.13□□□□□ -0.79
RANBP3-229ENST00000592771 K7EQD1 137 aa10.13□□□□□ -0.79
RANBP3-229ENST00000592771 LINC00242Q5T6M2 205 aa10.13□□□□□ -0.79
RANBP3-229ENST00000592771 NOP10Q9NPE3 64 aaKnown RBP10.13□□□□□ -0.79
RANBP3-229ENST00000592771 A8MZ25 164 aa10.12□□□□□ -0.79
RANBP3-229ENST00000592771 H7C423 109 aa10.12□□□□□ -0.79
RANBP3-229ENST00000592771 MRPL23Q16540 153 aaKnown RBP10.12□□□□□ -0.79
RANBP3-229ENST00000592771 HERV-K104P63124 156 aa10.11□□□□□ -0.79
RANBP3-229ENST00000592771 DEFB121Q5J5C9 76 aa10.11□□□□□ -0.79
RANBP3-229ENST00000592771 TRAV8-4A0A0B4J246 113 aa10.11□□□□□ -0.79
RANBP3-229ENST00000592771 FAM240AA0A1B0GVK7 77 aa10.11□□□□□ -0.79
RANBP3-229ENST00000592771 Q6Q795 121 aa10.11□□□□□ -0.79
RANBP3-229ENST00000592771 LINC00308Q8TCZ7 52 aa10.11□□□□□ -0.79
RANBP3-229ENST00000592771 PRIMA1Q86XR5 153 aa10.1□□□□□ -0.79
RANBP3-229ENST00000592771 Q9H8V8 135 aa10.1□□□□□ -0.79
RANBP3-229ENST00000592771 SNCGO76070 127 aa10.09□□□□□ -0.79
RANBP3-229ENST00000592771 COX6A2Q02221 97 aa10.09□□□□□ -0.79
RANBP3-229ENST00000592771 TENM1Q9UKZ4 2725 aa10.09□□□□□ -0.79
RANBP3-229ENST00000592771 VWFP04275 2813 aa10.09□□□□□ -0.79
RANBP3-229ENST00000592771 SMIM1B2RUZ4 78 aa10.09□□□□□ -0.79
RANBP3-229ENST00000592771 CDC42SE2Q9NRR3 84 aa10.09□□□□□ -0.79
RANBP3-229ENST00000592771 TEX49A0A1B0GTD5 131 aa10.08□□□□□ -0.8
RANBP3-229ENST00000592771 WFDC9Q8NEX5 89 aa10.08□□□□□ -0.8
RANBP3-229ENST00000592771 ATRQ13535 2644 aa10.08□□□□□ -0.8
RANBP3-229ENST00000592771 NTM-AS1Q6ZSK4 140 aa10.07□□□□□ -0.8
RANBP3-229ENST00000592771 ZNF625Q96I27 306 aaPredicted RBP10.07□□□□□ -0.8
RANBP3-229ENST00000592771 WIPF1O43516 503 aa10.07□□□□□ -0.8
RANBP3-229ENST00000592771 GAGE7O76087 117 aa10.07□□□□□ -0.8
RANBP3-229ENST00000592771 GAGE12FP0CL80 117 aa10.07□□□□□ -0.8
RANBP3-229ENST00000592771 GAGE12GP0CL81 117 aa10.07□□□□□ -0.8
RANBP3-229ENST00000592771 GAGE12IP0CL82 117 aa10.07□□□□□ -0.8
RANBP3-229ENST00000592771 LINC00694P0DN24 101 aa10.07□□□□□ -0.8
RANBP3-229ENST00000592771 NPC2P61916 151 aa10.07□□□□□ -0.8
RANBP3-229ENST00000592771 GAGE2BQ13066 116 aa10.07□□□□□ -0.8
RANBP3-229ENST00000592771 GAGE2EQ4V326 116 aa10.07□□□□□ -0.8
RANBP3-229ENST00000592771 GAGE2DQ9UEU5 116 aa10.07□□□□□ -0.8
RANBP3-229ENST00000592771 F5H768 121 aa10.06□□□□□ -0.8
RANBP3-229ENST00000592771 COX7A2LO14548 114 aa10.06□□□□□ -0.8
RANBP3-229ENST00000592771 KRTAP24-1Q3LI83 254 aa10.06□□□□□ -0.8
RANBP3-229ENST00000592771 SHISA2Q6UWI4 295 aa10.06□□□□□ -0.8
RANBP3-229ENST00000592771 TRGV2A0A075B6R0 118 aa10.05□□□□□ -0.8
RANBP3-229ENST00000592771 LINC00612Q8N6U2 182 aa10.05□□□□□ -0.8
RANBP3-229ENST00000592771 CLEC2BQ92478 149 aa10.05□□□□□ -0.8
RANBP3-229ENST00000592771 TMEM243Q9BU79 118 aa10.05□□□□□ -0.8
RANBP3-229ENST00000592771 TRBV6-4A0A1B0GX49 114 aa10.05□□□□□ -0.8
RANBP3-229ENST00000592771 UBE2L6O14933 153 aa10.05□□□□□ -0.8
RANBP3-229ENST00000592771 KIR2DL5BQ8NHK3 375 aa10.05□□□□□ -0.8
RANBP3-229ENST00000592771 X6R8D5 127 aa10.05□□□□□ -0.8
RANBP3-229ENST00000592771 SMIM9A6NGZ8 99 aa10.04□□□□□ -0.8
RANBP3-229ENST00000592771 DAND5Q8N907 189 aa10.04□□□□□ -0.8
RANBP3-229ENST00000592771 ANAPC13Q9BS18 74 aa10.04□□□□□ -0.8
RANBP3-229ENST00000592771 TRAV13-1A0A0B4J241 112 aa10.03□□□□□ -0.8
RANBP3-229ENST00000592771 ACYP1P07311 99 aa10.03□□□□□ -0.8
RANBP3-229ENST00000592771 MEIG1Q5JSS6 88 aa10.03□□□□□ -0.8
RANBP3-229ENST00000592771 GAGE12JA6NER3 117 aa10.03□□□□□ -0.8
RANBP3-229ENST00000592771 TRACP01848 142 aa10.03□□□□□ -0.8
RANBP3-229ENST00000592771 GAGE4Q13068 117 aa10.03□□□□□ -0.8
RANBP3-229ENST00000592771 GAGE5Q13069 117 aa10.03□□□□□ -0.8
RANBP3-229ENST00000592771 FAM222AQ5U5X8 452 aa10.03□□□□□ -0.8
RANBP3-229ENST00000592771 FHL2Q14192 279 aa10.02□□□□□ -0.81
RANBP3-229ENST00000592771 TRAV26-1A0A087WT03 109 aa10.01□□□□□ -0.81
RANBP3-229ENST00000592771 SOSTDC1Q6X4U4 206 aa10.01□□□□□ -0.81
RANBP3-229ENST00000592771 C15orf53Q8NAA6 179 aa10.01□□□□□ -0.81
RANBP3-229ENST00000592771 TRAV13-2A0A0B4J235 113 aa10□□□□□ -0.81
RANBP3-229ENST00000592771 TRGV4A0A0C4DH28 118 aa10□□□□□ -0.81
RANBP3-229ENST00000592771 APOC4P55056 127 aa9.99□□□□□ -0.81
RANBP3-229ENST00000592771 TTC32Q5I0X7 151 aa9.99□□□□□ -0.81
RANBP3-229ENST00000592771 FBN1P35555 2871 aaKnown RBP9.99□□□□□ -0.81
RANBP3-229ENST00000592771 LOC100131303A0A0U1RQF7 123 aa9.99□□□□□ -0.81
RANBP3-229ENST00000592771 NDUFV3P56181 108 aaKnown RBP9.99□□□□□ -0.81
RANBP3-229ENST00000592771 COX7B2Q8TF08 81 aa9.98□□□□□ -0.81
RANBP3-229ENST00000592771 RPL28P46779 137 aaKnown RBP9.97□□□□□ -0.81
RANBP3-229ENST00000592771 LYRM9A8MSI8 78 aa9.96□□□□□ -0.81
RANBP3-229ENST00000592771 DEFB130BP0DP73 79 aa9.96□□□□□ -0.81
RANBP3-229ENST00000592771 DEFB130AP0DP74 79 aa9.96□□□□□ -0.81
RANBP3-229ENST00000592771 GAGE6Q13070 117 aa9.96□□□□□ -0.81
RANBP3-229ENST00000592771 C3orf56Q8N813 242 aa9.96□□□□□ -0.81
RANBP3-229ENST00000592771 TRRAPQ9Y4A5 3859 aa9.96□□□□□ -0.82
RANBP3-229ENST00000592771 TRBV7-7A0A0K0K1E9 115 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms