RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 TRIAP1O43715 76 aa11.68□□□□□ -0.54
PRKCSH-217ENST00000592741 DEFB130BP0DP73 79 aa11.68□□□□□ -0.54
PRKCSH-217ENST00000592741 DEFB130AP0DP74 79 aa11.68□□□□□ -0.54
PRKCSH-217ENST00000592741 ICOSQ9Y6W8 199 aa11.68□□□□□ -0.54
PRKCSH-217ENST00000592741 GAGE12HA6NDE8 117 aa11.67□□□□□ -0.54
PRKCSH-217ENST00000592741 C9orf66Q5T8R8 295 aa11.67□□□□□ -0.54
PRKCSH-217ENST00000592741 LINC00612Q8N6U2 182 aa11.67□□□□□ -0.54
PRKCSH-217ENST00000592741 COPS9Q8WXC6 57 aa11.67□□□□□ -0.54
PRKCSH-217ENST00000592741 HELZ2Q9BYK8 2649 aaKnown RBP11.67□□□□□ -0.54
PRKCSH-217ENST00000592741 C9JAW5 83 aa11.66□□□□□ -0.54
PRKCSH-217ENST00000592741 PRIMA1Q86XR5 153 aa11.66□□□□□ -0.54
PRKCSH-217ENST00000592741 PPDPFLQ8WWR9 84 aa11.66□□□□□ -0.54
PRKCSH-217ENST00000592741 ZNF625Q96I27 306 aaPredicted RBP11.66□□□□□ -0.54
PRKCSH-217ENST00000592741 JMJD1CQ15652 2540 aa11.66□□□□□ -0.54
PRKCSH-217ENST00000592741 INAFM1C9JVW0 142 aa11.66□□□□□ -0.54
PRKCSH-217ENST00000592741 SLC25A20O43772 301 aa11.66□□□□□ -0.54
PRKCSH-217ENST00000592741 HERV-K104P63124 156 aa11.66□□□□□ -0.54
PRKCSH-217ENST00000592741 LINC00308Q8TCZ7 52 aa11.66□□□□□ -0.54
PRKCSH-217ENST00000592741 SPATA25Q9BR10 227 aa11.66□□□□□ -0.54
PRKCSH-217ENST00000592741 CHCHD5Q9BSY4 110 aa11.66□□□□□ -0.54
PRKCSH-217ENST00000592741 NIPBLQ6KC79 2804 aaeCLIP11.66□□□□□ -0.54
PRKCSH-217ENST00000592741 SMIM9A6NGZ8 99 aa11.65□□□□□ -0.54
PRKCSH-217ENST00000592741 M0QXV9 152 aa11.65□□□□□ -0.54
PRKCSH-217ENST00000592741 MEIG1Q5JSS6 88 aa11.65□□□□□ -0.54
PRKCSH-217ENST00000592741 COX6CP09669 75 aa11.65□□□□□ -0.55
PRKCSH-217ENST00000592741 X6R8D5 127 aa11.65□□□□□ -0.55
PRKCSH-217ENST00000592741 NOTCH3Q9UM47 2321 aa11.64□□□□□ -0.55
PRKCSH-217ENST00000592741 RPL13AP40429 203 aaKnown RBP11.64□□□□□ -0.55
PRKCSH-217ENST00000592741 ANKRD29Q8N6D5 301 aa11.64□□□□□ -0.55
PRKCSH-217ENST00000592741 SIGMAR1Q99720 223 aa11.64□□□□□ -0.55
PRKCSH-217ENST00000592741 LINC01620Q4KN68 170 aa11.63□□□□□ -0.55
PRKCSH-217ENST00000592741 FASNP49327 2511 aaKnown RBP11.63□□□□□ -0.55
PRKCSH-217ENST00000592741 IGLV4-60A0A075B6I1 120 aa11.63□□□□□ -0.55
PRKCSH-217ENST00000592741 A0A0U1RRA0 63 aa11.63□□□□□ -0.55
PRKCSH-217ENST00000592741 IGKV3OR2-268A0A0C4DH90 116 aa11.62□□□□□ -0.55
PRKCSH-217ENST00000592741 CARD19Q96LW7 228 aa11.62□□□□□ -0.55
PRKCSH-217ENST00000592741 GYPEP15421 78 aa11.62□□□□□ -0.55
PRKCSH-217ENST00000592741 SPATA3Q8NHX4 192 aa11.6□□□□□ -0.55
PRKCSH-217ENST00000592741 COX7B2Q8TF08 81 aa11.6□□□□□ -0.55
PRKCSH-217ENST00000592741 TRBV10-2A0A0K0K1G8 114 aa11.59□□□□□ -0.55
PRKCSH-217ENST00000592741 LYRM9A8MSI8 78 aa11.59□□□□□ -0.55
PRKCSH-217ENST00000592741 SOSTDC1Q6X4U4 206 aa11.59□□□□□ -0.55
PRKCSH-217ENST00000592741 PRO0255Q9UI72 69 aa11.59□□□□□ -0.55
PRKCSH-217ENST00000592741 PPDPFQ9H3Y8 114 aa11.58□□□□□ -0.56
PRKCSH-217ENST00000592741 APOC4P55056 127 aa11.57□□□□□ -0.56
PRKCSH-217ENST00000592741 FAM222AQ5U5X8 452 aa11.57□□□□□ -0.56
PRKCSH-217ENST00000592741 LINC01600Q96MT4 127 aa11.57□□□□□ -0.56
PRKCSH-217ENST00000592741 TOMM7Q9P0U1 55 aa11.57□□□□□ -0.56
PRKCSH-217ENST00000592741 IGHV3OR16-9A0A0B4J2B5 98 aa11.57□□□□□ -0.56
PRKCSH-217ENST00000592741 LST1O00453 97 aa11.56□□□□□ -0.56
PRKCSH-217ENST00000592741 SCGB1A1P11684 91 aa11.56□□□□□ -0.56
PRKCSH-217ENST00000592741 DEFB135Q30KP9 77 aa11.56□□□□□ -0.56
PRKCSH-217ENST00000592741 CLEC2BQ92478 149 aa11.56□□□□□ -0.56
PRKCSH-217ENST00000592741 A0A087WZ39 114 aa11.55□□□□□ -0.56
PRKCSH-217ENST00000592741 TMEM262E9PQX1 116 aa11.55□□□□□ -0.56
PRKCSH-217ENST00000592741 LINC00959A0A1B0GUT2 108 aa11.54□□□□□ -0.56
PRKCSH-217ENST00000592741 PAX4O43316 350 aa11.54□□□□□ -0.56
PRKCSH-217ENST00000592741 CDIP1Q9H305 208 aa11.54□□□□□ -0.56
PRKCSH-217ENST00000592741 NTN5Q8WTR8 489 aaPredicted RBP11.54□□□□□ -0.56
PRKCSH-217ENST00000592741 CITED1Q99966 193 aa11.54□□□□□ -0.56
PRKCSH-217ENST00000592741 A0A1B0GUV1 79 aa11.53□□□□□ -0.56
PRKCSH-217ENST00000592741 H3BT86 120 aa11.53□□□□□ -0.56
PRKCSH-217ENST00000592741 C2orf82Q6UX34 121 aa11.53□□□□□ -0.56
PRKCSH-217ENST00000592741 C2CD3Q4AC94 2353 aa11.53□□□□□ -0.56
PRKCSH-217ENST00000592741 C5orf38Q86SI9 138 aa11.53□□□□□ -0.56
PRKCSH-217ENST00000592741 SS18Q15532 418 aa11.52□□□□□ -0.57
PRKCSH-217ENST00000592741 A0A096LPF7 62 aa11.51□□□□□ -0.57
PRKCSH-217ENST00000592741 IGHV4-28A0A0C4DH34 117 aa11.51□□□□□ -0.57
PRKCSH-217ENST00000592741 MIR7-3HGQ8N6C7 128 aa11.51□□□□□ -0.57
PRKCSH-217ENST00000592741 GCN1Q92616 2671 aaKnown RBP11.51□□□□□ -0.57
PRKCSH-217ENST00000592741 DEFB4AO15263 64 aa11.51□□□□□ -0.57
PRKCSH-217ENST00000592741 COX7A2LO14548 114 aa11.5□□□□□ -0.57
PRKCSH-217ENST00000592741 DAD1P61803 113 aa11.5□□□□□ -0.57
PRKCSH-217ENST00000592741 SHISA2Q6UWI4 295 aa11.5□□□□□ -0.57
PRKCSH-217ENST00000592741 LINC00158P58513 81 aa11.5□□□□□ -0.57
PRKCSH-217ENST00000592741 UBE2WQ96B02 151 aa11.5□□□□□ -0.57
PRKCSH-217ENST00000592741 IBA57-AS1B1ANH7 110 aa11.49□□□□□ -0.57
PRKCSH-217ENST00000592741 OTOGQ6ZRI0 2925 aa11.49□□□□□ -0.57
PRKCSH-217ENST00000592741 TRAV13-2A0A0B4J235 113 aa11.48□□□□□ -0.57
PRKCSH-217ENST00000592741 XCL1P47992 114 aa11.48□□□□□ -0.57
PRKCSH-217ENST00000592741 HECTD1Q9ULT8 2610 aa11.48□□□□□ -0.57
PRKCSH-217ENST00000592741 MIFP14174 115 aa11.48□□□□□ -0.57
PRKCSH-217ENST00000592741 CRPP02741 224 aa11.47□□□□□ -0.57
PRKCSH-217ENST00000592741 SND1-IT1Q9HBX3 110 aa11.47□□□□□ -0.57
PRKCSH-217ENST00000592741 TEX49A0A1B0GTD5 131 aa11.47□□□□□ -0.57
PRKCSH-217ENST00000592741 CLPSL2Q6UWE3 100 aa11.47□□□□□ -0.57
PRKCSH-217ENST00000592741 ATP5G1P05496 136 aa11.46□□□□□ -0.57
PRKCSH-217ENST00000592741 C6orf226Q5I0X4 101 aa11.46□□□□□ -0.57
PRKCSH-217ENST00000592741 LINC01561Q8N1V8 128 aa11.46□□□□□ -0.57
PRKCSH-217ENST00000592741 Q8NAQ8 132 aa11.46□□□□□ -0.57
PRKCSH-217ENST00000592741 FN1P02751 2386 aaKnown RBP11.45□□□□□ -0.58
PRKCSH-217ENST00000592741 WFDC9Q8NEX5 89 aa11.45□□□□□ -0.58
PRKCSH-217ENST00000592741 CELA1Q9UNI1 258 aa11.45□□□□□ -0.58
PRKCSH-217ENST00000592741 XGP55808 180 aa11.44□□□□□ -0.58
PRKCSH-217ENST00000592741 Q8IZM0 81 aa11.44□□□□□ -0.58
PRKCSH-217ENST00000592741 C11orf68Q9H3H3 251 aaKnown RBP11.44□□□□□ -0.58
PRKCSH-217ENST00000592741 TRAV26-1A0A087WT03 109 aa11.44□□□□□ -0.58
PRKCSH-217ENST00000592741 MT-ATP8P03928 68 aa11.44□□□□□ -0.58
PRKCSH-217ENST00000592741 PFN2P35080 140 aa11.44□□□□□ -0.58
PRKCSH-217ENST00000592741 TRAV8-4A0A0B4J246 113 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms