RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 FAM222AQ5U5X8 452 aa8.2□□□□□ -1.1
ZNF540-210ENST00000592533 ITPR3Q14573 2671 aa8.2□□□□□ -1.1
ZNF540-210ENST00000592533 UBE2L6O14933 153 aa8.2□□□□□ -1.1
ZNF540-210ENST00000592533 NHLRC4P0CG21 123 aaPredicted RBP8.2□□□□□ -1.1
ZNF540-210ENST00000592533 C15orf53Q8NAA6 179 aa8.2□□□□□ -1.1
ZNF540-210ENST00000592533 APCP25054 2843 aa8.19□□□□□ -1.1
ZNF540-210ENST00000592533 A0A1W2PRX2 142 aa8.19□□□□□ -1.1
ZNF540-210ENST00000592533 IGLV1-51P01701 117 aa8.19□□□□□ -1.1
ZNF540-210ENST00000592533 NDUFV3P56181 108 aaKnown RBP8.19□□□□□ -1.1
ZNF540-210ENST00000592533 MEIG1Q5JSS6 88 aa8.19□□□□□ -1.1
ZNF540-210ENST00000592533 WNK1Q9H4A3 2382 aa8.19□□□□□ -1.1
ZNF540-210ENST00000592533 ACYP1P07311 99 aa8.18□□□□□ -1.1
ZNF540-210ENST00000592533 EPG5Q9HCE0 2579 aa8.18□□□□□ -1.1
ZNF540-210ENST00000592533 SETXQ7Z333 2677 aaKnown RBP8.18□□□□□ -1.1
ZNF540-210ENST00000592533 COX7B2Q8TF08 81 aa8.18□□□□□ -1.1
ZNF540-210ENST00000592533 TRAV13-2A0A0B4J235 113 aa8.17□□□□□ -1.1
ZNF540-210ENST00000592533 TRBV7-7A0A0K0K1E9 115 aa8.17□□□□□ -1.1
ZNF540-210ENST00000592533 RNASE1P07998 156 aaKnown RBP8.17□□□□□ -1.1
ZNF540-210ENST00000592533 RPL28P46779 137 aaKnown RBP8.17□□□□□ -1.1
ZNF540-210ENST00000592533 C11orf44Q8N8P7 122 aa8.17□□□□□ -1.1
ZNF540-210ENST00000592533 LINC01006Q8NI28 216 aa8.17□□□□□ -1.1
ZNF540-210ENST00000592533 ZFYVE26Q68DK2 2539 aa8.16□□□□□ -1.1
ZNF540-210ENST00000592533 TRGV2A0A075B6R0 118 aa8.16□□□□□ -1.1
ZNF540-210ENST00000592533 GAGE7O76087 117 aa8.16□□□□□ -1.1
ZNF540-210ENST00000592533 GAGE12FP0CL80 117 aa8.16□□□□□ -1.1
ZNF540-210ENST00000592533 GAGE12GP0CL81 117 aa8.16□□□□□ -1.1
ZNF540-210ENST00000592533 GAGE12IP0CL82 117 aa8.16□□□□□ -1.1
ZNF540-210ENST00000592533 A0A0U1RRA0 63 aa8.16□□□□□ -1.1
ZNF540-210ENST00000592533 HIST2H2BCQ6DN03 193 aa8.16□□□□□ -1.1
ZNF540-210ENST00000592533 WFDC11Q8NEX6 87 aa8.16□□□□□ -1.1
ZNF540-210ENST00000592533 TRBV6-8A0A0A6YYG3 113 aa8.16□□□□□ -1.1
ZNF540-210ENST00000592533 IGHV3OR16-9A0A0B4J2B5 98 aa8.16□□□□□ -1.1
ZNF540-210ENST00000592533 LOC100131303A0A0U1RQF7 123 aa8.16□□□□□ -1.1
ZNF540-210ENST00000592533 FHL2Q14192 279 aa8.16□□□□□ -1.1
ZNF540-210ENST00000592533 SDIM1Q6ZPB5 146 aa8.15□□□□□ -1.1
ZNF540-210ENST00000592533 C22orf24Q9Y442 160 aa8.15□□□□□ -1.1
ZNF540-210ENST00000592533 TLN2Q9Y4G6 2542 aa8.15□□□□□ -1.11
ZNF540-210ENST00000592533 KRTAP1-1Q07627 177 aa8.15□□□□□ -1.11
ZNF540-210ENST00000592533 GAGE6Q13070 117 aa8.14□□□□□ -1.11
ZNF540-210ENST00000592533 TTC32Q5I0X7 151 aa8.14□□□□□ -1.11
ZNF540-210ENST00000592533 WFDC10AQ9H1F0 79 aa8.14□□□□□ -1.11
ZNF540-210ENST00000592533 A0A087WZ39 114 aa8.14□□□□□ -1.11
ZNF540-210ENST00000592533 TRGV4A0A0C4DH28 118 aa8.14□□□□□ -1.11
ZNF540-210ENST00000592533 IGKV2-28A0A075B6P5 120 aa8.14□□□□□ -1.11
ZNF540-210ENST00000592533 IGKV2D-28P01615 120 aa8.14□□□□□ -1.11
ZNF540-210ENST00000592533 LINC00612Q8N6U2 182 aa8.14□□□□□ -1.11
ZNF540-210ENST00000592533 FAM218AQ96MZ4 157 aa8.14□□□□□ -1.11
ZNF540-210ENST00000592533 NOTCH3Q9UM47 2321 aa8.13□□□□□ -1.11
ZNF540-210ENST00000592533 IBA57-AS1B1ANH7 110 aa8.13□□□□□ -1.11
ZNF540-210ENST00000592533 MIR7-3HGQ8N6C7 128 aa8.13□□□□□ -1.11
ZNF540-210ENST00000592533 LINC00337Q8N6G1 96 aa8.13□□□□□ -1.11
ZNF540-210ENST00000592533 NF1P21359 2839 aa8.13□□□□□ -1.11
ZNF540-210ENST00000592533 IGLV4-60A0A075B6I1 120 aa8.13□□□□□ -1.11
ZNF540-210ENST00000592533 CRPP02741 224 aa8.13□□□□□ -1.11
ZNF540-210ENST00000592533 RPL35AP18077 110 aaKnown RBP8.13□□□□□ -1.11
ZNF540-210ENST00000592533 IMUPQ9GZP8 106 aa8.13□□□□□ -1.11
ZNF540-210ENST00000592533 BAALC-AS2P0C853 105 aa8.12□□□□□ -1.11
ZNF540-210ENST00000592533 KIR2DL5BQ8NHK3 375 aa8.12□□□□□ -1.11
ZNF540-210ENST00000592533 SND1-IT1Q9HBX3 110 aa8.12□□□□□ -1.11
ZNF540-210ENST00000592533 FLNAP21333 2647 aaKnown RBP8.12□□□□□ -1.11
ZNF540-210ENST00000592533 SONP18583 2426 aaKnown RBP8.12□□□□□ -1.11
ZNF540-210ENST00000592533 NBPF19A0A087WUL8 3843 aa8.1□□□□□ -1.11
ZNF540-210ENST00000592533 CCL18P55774 89 aa8.1□□□□□ -1.11
ZNF540-210ENST00000592533 JMJD1CQ15652 2540 aa8.1□□□□□ -1.11
ZNF540-210ENST00000592533 INAFM2P0DMQ5 153 aa8.09□□□□□ -1.11
ZNF540-210ENST00000592533 LINC01561Q8N1V8 128 aa8.09□□□□□ -1.11
ZNF540-210ENST00000592533 CUBNO60494 3623 aa8.09□□□□□ -1.11
ZNF540-210ENST00000592533 A0A1B0GUV1 79 aa8.09□□□□□ -1.11
ZNF540-210ENST00000592533 CHCHD5Q9BSY4 110 aa8.09□□□□□ -1.11
ZNF540-210ENST00000592533 LINC00959A0A1B0GUT2 108 aa8.09□□□□□ -1.11
ZNF540-210ENST00000592533 LINC00643Q86TS7 51 aa8.09□□□□□ -1.11
ZNF540-210ENST00000592533 H0YGX0 51 aa8.08□□□□□ -1.12
ZNF540-210ENST00000592533 LY6G6DO95868 133 aa8.08□□□□□ -1.12
ZNF540-210ENST00000592533 PLA2G2AP14555 144 aa8.08□□□□□ -1.12
ZNF540-210ENST00000592533 MALP21145 153 aa8.08□□□□□ -1.12
ZNF540-210ENST00000592533 SMIM11BQ8TCY0 68 aa8.08□□□□□ -1.12
ZNF540-210ENST00000592533 SMCR5Q8TEV8 140 aa8.08□□□□□ -1.12
ZNF540-210ENST00000592533 LINC00158P58513 81 aa8.08□□□□□ -1.12
ZNF540-210ENST00000592533 TOMM7Q9P0U1 55 aa8.08□□□□□ -1.12
ZNF540-210ENST00000592533 ANK3Q12955 4377 aaKnown RBP8.07□□□□□ -1.12
ZNF540-210ENST00000592533 OBSCN-AS1Q96MR7 158 aa8.07□□□□□ -1.12
ZNF540-210ENST00000592533 C2CD3Q4AC94 2353 aa8.07□□□□□ -1.12
ZNF540-210ENST00000592533 HILS1P60008 231 aa8.07□□□□□ -1.12
ZNF540-210ENST00000592533 PDZD2O15018 2839 aa8.07□□□□□ -1.12
ZNF540-210ENST00000592533 NIPBLQ6KC79 2804 aaeCLIP8.07□□□□□ -1.12
ZNF540-210ENST00000592533 CCDC179H3BU77 68 aa8.06□□□□□ -1.12
ZNF540-210ENST00000592533 Q8IZM0 81 aa8.06□□□□□ -1.12
ZNF540-210ENST00000592533 B5MCH6 92 aa8.05□□□□□ -1.12
ZNF540-210ENST00000592533 A0A087WYN8 130 aa8.05□□□□□ -1.12
ZNF540-210ENST00000592533 IGKV3OR2-268A0A0C4DH90 116 aa8.05□□□□□ -1.12
ZNF540-210ENST00000592533 SMIM9A6NGZ8 99 aa8.05□□□□□ -1.12
ZNF540-210ENST00000592533 CXCL5P42830 114 aa8.05□□□□□ -1.12
ZNF540-210ENST00000592533 C5orf38Q86SI9 138 aa8.05□□□□□ -1.12
ZNF540-210ENST00000592533 Q9HAA7 133 aa8.04□□□□□ -1.12
ZNF540-210ENST00000592533 GYPEP15421 78 aa8.04□□□□□ -1.12
ZNF540-210ENST00000592533 SS18Q15532 418 aa8.04□□□□□ -1.12
ZNF540-210ENST00000592533 X6R8D5 127 aa8.04□□□□□ -1.12
ZNF540-210ENST00000592533 DNAL4O96015 105 aa8.03□□□□□ -1.12
ZNF540-210ENST00000592533 LINC00482Q8N8I6 264 aa8.03□□□□□ -1.12
ZNF540-210ENST00000592533 PRO0255Q9UI72 69 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms