RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 APOBP04114 4563 aaKnown RBP6.37□□□□□ -1.39
TPM4-215ENST00000592138 IGLV5-52A0A0A0MRZ9 124 aa6.37□□□□□ -1.39
TPM4-215ENST00000592138 TRAV13-1A0A0B4J241 112 aa6.37□□□□□ -1.39
TPM4-215ENST00000592138 IFITM10A6NMD0 228 aa6.37□□□□□ -1.39
TPM4-215ENST00000592138 LECT2O14960 151 aa6.37□□□□□ -1.39
TPM4-215ENST00000592138 XCL1P47992 114 aa6.37□□□□□ -1.39
TPM4-215ENST00000592138 RNASE13Q5GAN3 156 aaKnown RBP6.37□□□□□ -1.39
TPM4-215ENST00000592138 CHCHD1Q96BP2 118 aaKnown RBP6.37□□□□□ -1.39
TPM4-215ENST00000592138 URB1-AS1Q96HZ7 61 aa6.37□□□□□ -1.39
TPM4-215ENST00000592138 C2orf88Q9BSF0 95 aa6.37□□□□□ -1.39
TPM4-215ENST00000592138 ANKRD39Q53RE8 183 aa6.36□□□□□ -1.39
TPM4-215ENST00000592138 FAM19A3Q7Z5A8 133 aa6.36□□□□□ -1.39
TPM4-215ENST00000592138 C15orf56Q8N910 161 aa6.36□□□□□ -1.39
TPM4-215ENST00000592138 OPRPNQ99935 248 aaPredicted RBP6.36□□□□□ -1.39
TPM4-215ENST00000592138 KRTAP4-5Q9BYR2 181 aa6.36□□□□□ -1.39
TPM4-215ENST00000592138 VCX2Q9H322 139 aa6.36□□□□□ -1.39
TPM4-215ENST00000592138 A0A096LNJ9 63 aa6.35□□□□□ -1.39
TPM4-215ENST00000592138 GVQW2A0A096LPI5 108 aaPredicted RBP6.35□□□□□ -1.39
TPM4-215ENST00000592138 IGHV3OR16-9A0A0B4J2B5 98 aa6.35□□□□□ -1.39
TPM4-215ENST00000592138 IGHV1-58A0A0C4DH39 117 aa6.35□□□□□ -1.39
TPM4-215ENST00000592138 HBDP02042 147 aa6.35□□□□□ -1.39
TPM4-215ENST00000592138 PRSS1P07477 247 aa6.35□□□□□ -1.39
TPM4-215ENST00000592138 GCSHP23434 173 aa6.35□□□□□ -1.39
TPM4-215ENST00000592138 UBE2D1P51668 147 aa6.35□□□□□ -1.39
TPM4-215ENST00000592138 CNBPP62633 177 aaKnown RBP6.35□□□□□ -1.39
TPM4-215ENST00000592138 LINC00173Q6ZV60 143 aa6.35□□□□□ -1.39
TPM4-215ENST00000592138 SCGB3A1Q96QR1 104 aa6.35□□□□□ -1.39
TPM4-215ENST00000592138 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.34□□□□□ -1.39
TPM4-215ENST00000592138 COX7A2LO14548 114 aa6.34□□□□□ -1.39
TPM4-215ENST00000592138 SMIM6P0DI80 62 aa6.34□□□□□ -1.39
TPM4-215ENST00000592138 SEC11AP67812 179 aa6.34□□□□□ -1.39
TPM4-215ENST00000592138 XP32Q5T750 250 aa6.34□□□□□ -1.39
TPM4-215ENST00000592138 DNAH8Q96JB1 4490 aa6.34□□□□□ -1.4
TPM4-215ENST00000592138 hDV102S1A0JD36 115 aa6.33□□□□□ -1.4
TPM4-215ENST00000592138 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.33□□□□□ -1.4
TPM4-215ENST00000592138 CDK2AP2O75956 126 aa6.33□□□□□ -1.4
TPM4-215ENST00000592138 APOMO95445 188 aa6.33□□□□□ -1.4
TPM4-215ENST00000592138 S100A12P80511 92 aa6.33□□□□□ -1.4
TPM4-215ENST00000592138 PDZD11Q5EBL8 140 aa6.33□□□□□ -1.4
TPM4-215ENST00000592138 LINC00242Q5T6M2 205 aa6.33□□□□□ -1.4
TPM4-215ENST00000592138 LINC01561Q8N1V8 128 aa6.33□□□□□ -1.4
TPM4-215ENST00000592138 A0A087WZ39 114 aa6.32□□□□□ -1.4
TPM4-215ENST00000592138 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.32□□□□□ -1.4
TPM4-215ENST00000592138 ATP5LO75964 103 aa6.32□□□□□ -1.4
TPM4-215ENST00000592138 MALP21145 153 aa6.32□□□□□ -1.4
TPM4-215ENST00000592138 HERVK_113P63121 156 aa6.32□□□□□ -1.4
TPM4-215ENST00000592138 BAGE3Q86Y29 109 aa6.32□□□□□ -1.4
TPM4-215ENST00000592138 C9orf163Q8N9P6 203 aa6.32□□□□□ -1.4
TPM4-215ENST00000592138 OR10D4PQ8NGN7 298 aa6.32□□□□□ -1.4
TPM4-215ENST00000592138 DMBT1Q9UGM3 2413 aaPredicted RBP6.32□□□□□ -1.4
TPM4-215ENST00000592138 HSBP1O75506 76 aa6.31□□□□□ -1.4
TPM4-215ENST00000592138 FUSP35637 526 aaKnown RBP eCLIP6.31□□□□□ -1.4
TPM4-215ENST00000592138 KRTAP10-1P60331 282 aa6.31□□□□□ -1.4
TPM4-215ENST00000592138 PMVKQ15126 192 aa6.31□□□□□ -1.4
TPM4-215ENST00000592138 COA6Q5JTJ3 125 aaKnown RBP6.31□□□□□ -1.4
TPM4-215ENST00000592138 Q6ZSA8 131 aa6.31□□□□□ -1.4
TPM4-215ENST00000592138 CST9LQ9H4G1 147 aa6.31□□□□□ -1.4
TPM4-215ENST00000592138 IGHV3-64A0A075B6Q5 118 aa6.3□□□□□ -1.4
TPM4-215ENST00000592138 TINCRA0A1B0GVN0 87 aa6.3□□□□□ -1.4
TPM4-215ENST00000592138 F8WDY8 70 aa6.3□□□□□ -1.4
TPM4-215ENST00000592138 ZNF561-AS1K7EIQ3 104 aa6.3□□□□□ -1.4
TPM4-215ENST00000592138 SLPIP03973 132 aa6.3□□□□□ -1.4
TPM4-215ENST00000592138 LINC00310P59036 64 aa6.3□□□□□ -1.4
TPM4-215ENST00000592138 SNRPEP62304 92 aaKnown RBP6.3□□□□□ -1.4
TPM4-215ENST00000592138 PMCHL1Q16048 86 aa6.3□□□□□ -1.4
TPM4-215ENST00000592138 HIGD2BQ4VC39 106 aa6.3□□□□□ -1.4
TPM4-215ENST00000592138 ZC2HC1BQ5TFG8 222 aa6.3□□□□□ -1.4
TPM4-215ENST00000592138 C5orf38Q86SI9 138 aa6.3□□□□□ -1.4
TPM4-215ENST00000592138 IGLV5-45A0A087WSX0 123 aa6.29□□□□□ -1.4
TPM4-215ENST00000592138 HIST1H2BKO60814 126 aa6.29□□□□□ -1.4
TPM4-215ENST00000592138 SERF1AO75920 110 aa6.29□□□□□ -1.4
TPM4-215ENST00000592138 HIST1H2BJP06899 126 aa6.29□□□□□ -1.4
TPM4-215ENST00000592138 HIST1H2BOP23527 126 aa6.29□□□□□ -1.4
TPM4-215ENST00000592138 HIST1H2BBP33778 126 aa6.29□□□□□ -1.4
TPM4-215ENST00000592138 HIST1H2BDP58876 126 aa6.29□□□□□ -1.4
TPM4-215ENST00000592138 HIST1H2BCP62807 126 aa6.29□□□□□ -1.4
TPM4-215ENST00000592138 COX6A2Q02221 97 aa6.29□□□□□ -1.4
TPM4-215ENST00000592138 HIST2H2BEQ16778 126 aa6.29□□□□□ -1.4
TPM4-215ENST00000592138 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.29□□□□□ -1.4
TPM4-215ENST00000592138 UBR4Q5T4S7 5183 aa6.29□□□□□ -1.4
TPM4-215ENST00000592138 HIST1H2BHQ93079 126 aa6.29□□□□□ -1.4
TPM4-215ENST00000592138 C2orf48Q96LS8 159 aa6.29□□□□□ -1.4
TPM4-215ENST00000592138 HIST1H2BNQ99877 126 aa6.29□□□□□ -1.4
TPM4-215ENST00000592138 HIST1H2BMQ99879 126 aa6.29□□□□□ -1.4
TPM4-215ENST00000592138 KRTAP4-8Q9BYQ9 185 aa6.29□□□□□ -1.4
TPM4-215ENST00000592138 PKIGQ9Y2B9 76 aa6.29□□□□□ -1.4
TPM4-215ENST00000592138 IGLC3P0DOY3 106 aa6.28□□□□□ -1.4
TPM4-215ENST00000592138 C12orf57Q99622 126 aa6.28□□□□□ -1.4
TPM4-215ENST00000592138 GEMIN7Q9H840 131 aaKnown RBP6.28□□□□□ -1.4
TPM4-215ENST00000592138 MYCBP2O75592 4640 aa6.27□□□□□ -1.41
TPM4-215ENST00000592138 IGLV4-69A0A075B6H9 119 aa6.27□□□□□ -1.41
TPM4-215ENST00000592138 TRAV12-1A0A0B4J245 112 aa6.27□□□□□ -1.41
TPM4-215ENST00000592138 A0A0J9YXV3 536 aa6.27□□□□□ -1.41
TPM4-215ENST00000592138 SPAG11BQ08648 103 aa6.27□□□□□ -1.41
TPM4-215ENST00000592138 SDIM1Q6ZPB5 146 aa6.27□□□□□ -1.41
TPM4-215ENST00000592138 ORAOV1Q8WV07 137 aa6.27□□□□□ -1.41
TPM4-215ENST00000592138 IFI27L1Q96BM0 104 aa6.27□□□□□ -1.41
TPM4-215ENST00000592138 CARD19Q96LW7 228 aa6.27□□□□□ -1.41
TPM4-215ENST00000592138 CDKN2A-AS1Q9UH64 79 aa6.27□□□□□ -1.41
TPM4-215ENST00000592138 LEPROTL1O95214 131 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms