RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 CUBNO60494 3623 aa13.5□□□□□ -0.25
PRKCSH-209ENST00000589838 F5H768 121 aa13.5□□□□□ -0.25
PRKCSH-209ENST00000589838 SMCPP49901 116 aaPredicted RBP13.49□□□□□ -0.25
PRKCSH-209ENST00000589838 GAGE6Q13070 117 aa13.49□□□□□ -0.25
PRKCSH-209ENST00000589838 X6R8D5 127 aa13.49□□□□□ -0.25
PRKCSH-209ENST00000589838 CHCHD5Q9BSY4 110 aa13.48□□□□□ -0.25
PRKCSH-209ENST00000589838 NOTCH3Q9UM47 2321 aa13.48□□□□□ -0.25
PRKCSH-209ENST00000589838 GCN1Q92616 2671 aaKnown RBP13.48□□□□□ -0.25
PRKCSH-209ENST00000589838 JMJD1CQ15652 2540 aa13.48□□□□□ -0.25
PRKCSH-209ENST00000589838 ATXN8Q156A1 80 aa13.47□□□□□ -0.25
PRKCSH-209ENST00000589838 LYRM9A8MSI8 78 aa13.46□□□□□ -0.25
PRKCSH-209ENST00000589838 M0QXV9 152 aa13.46□□□□□ -0.25
PRKCSH-209ENST00000589838 COX6CP09669 75 aa13.46□□□□□ -0.25
PRKCSH-209ENST00000589838 APOC4P55056 127 aa13.46□□□□□ -0.25
PRKCSH-209ENST00000589838 NPC2P61916 151 aa13.46□□□□□ -0.25
PRKCSH-209ENST00000589838 PRIMA1Q86XR5 153 aa13.46□□□□□ -0.25
PRKCSH-209ENST00000589838 ZNF625Q96I27 306 aaPredicted RBP13.46□□□□□ -0.26
PRKCSH-209ENST00000589838 FOXI1Q12951 378 aa13.45□□□□□ -0.26
PRKCSH-209ENST00000589838 LINC00308Q8TCZ7 52 aa13.45□□□□□ -0.26
PRKCSH-209ENST00000589838 PRO0255Q9UI72 69 aa13.45□□□□□ -0.26
PRKCSH-209ENST00000589838 GYPEP15421 78 aa13.44□□□□□ -0.26
PRKCSH-209ENST00000589838 MEIG1Q5JSS6 88 aa13.44□□□□□ -0.26
PRKCSH-209ENST00000589838 TEN1Q86WV5 123 aa13.44□□□□□ -0.26
PRKCSH-209ENST00000589838 ICOSQ9Y6W8 199 aa13.44□□□□□ -0.26
PRKCSH-209ENST00000589838 PPDPFLQ8WWR9 84 aa13.44□□□□□ -0.26
PRKCSH-209ENST00000589838 PPDPFQ9H3Y8 114 aa13.44□□□□□ -0.26
PRKCSH-209ENST00000589838 TRIAP1O43715 76 aa13.43□□□□□ -0.26
PRKCSH-209ENST00000589838 CITED1Q99966 193 aa13.43□□□□□ -0.26
PRKCSH-209ENST00000589838 IGLV4-60A0A075B6I1 120 aa13.42□□□□□ -0.26
PRKCSH-209ENST00000589838 DAND5Q8N907 189 aa13.42□□□□□ -0.26
PRKCSH-209ENST00000589838 SLC25A20O43772 301 aa13.42□□□□□ -0.26
PRKCSH-209ENST00000589838 COX7B2Q8TF08 81 aa13.42□□□□□ -0.26
PRKCSH-209ENST00000589838 C9JAW5 83 aa13.41□□□□□ -0.26
PRKCSH-209ENST00000589838 RPL13AP40429 203 aaKnown RBP13.41□□□□□ -0.26
PRKCSH-209ENST00000589838 FAM222AQ5U5X8 452 aa13.41□□□□□ -0.26
PRKCSH-209ENST00000589838 GAGE12HA6NDE8 117 aa13.4□□□□□ -0.26
PRKCSH-209ENST00000589838 IGKV3OR2-268A0A0C4DH90 116 aa13.4□□□□□ -0.26
PRKCSH-209ENST00000589838 LINC01620Q4KN68 170 aa13.4□□□□□ -0.26
PRKCSH-209ENST00000589838 A0A1B0GUV1 79 aa13.39□□□□□ -0.27
PRKCSH-209ENST00000589838 C21orf62-AS1Q17RA5 79 aa13.39□□□□□ -0.27
PRKCSH-209ENST00000589838 SPATA3Q8NHX4 192 aa13.39□□□□□ -0.27
PRKCSH-209ENST00000589838 SPATA25Q9BR10 227 aa13.39□□□□□ -0.27
PRKCSH-209ENST00000589838 IGHV3OR16-9A0A0B4J2B5 98 aa13.38□□□□□ -0.27
PRKCSH-209ENST00000589838 PAX4O43316 350 aa13.38□□□□□ -0.27
PRKCSH-209ENST00000589838 NIPBLQ6KC79 2804 aaeCLIP13.38□□□□□ -0.27
PRKCSH-209ENST00000589838 DEFB135Q30KP9 77 aa13.38□□□□□ -0.27
PRKCSH-209ENST00000589838 LINC01600Q96MT4 127 aa13.38□□□□□ -0.27
PRKCSH-209ENST00000589838 SIGMAR1Q99720 223 aa13.38□□□□□ -0.27
PRKCSH-209ENST00000589838 A0A087WZ39 114 aa13.37□□□□□ -0.27
PRKCSH-209ENST00000589838 A0A0U1RRA0 63 aa13.37□□□□□ -0.27
PRKCSH-209ENST00000589838 TMEM262E9PQX1 116 aa13.37□□□□□ -0.27
PRKCSH-209ENST00000589838 LINC00959A0A1B0GUT2 108 aa13.36□□□□□ -0.27
PRKCSH-209ENST00000589838 ANKRD29Q8N6D5 301 aa13.36□□□□□ -0.27
PRKCSH-209ENST00000589838 WFDC9Q8NEX5 89 aa13.36□□□□□ -0.27
PRKCSH-209ENST00000589838 TRBV10-2A0A0K0K1G8 114 aa13.36□□□□□ -0.27
PRKCSH-209ENST00000589838 SS18Q15532 418 aa13.36□□□□□ -0.27
PRKCSH-209ENST00000589838 MIFP14174 115 aa13.35□□□□□ -0.27
PRKCSH-209ENST00000589838 CARD19Q96LW7 228 aa13.35□□□□□ -0.27
PRKCSH-209ENST00000589838 TOMM7Q9P0U1 55 aa13.35□□□□□ -0.27
PRKCSH-209ENST00000589838 DAD1P61803 113 aa13.34□□□□□ -0.27
PRKCSH-209ENST00000589838 C2CD3Q4AC94 2353 aa13.34□□□□□ -0.27
PRKCSH-209ENST00000589838 IGHV4-28A0A0C4DH34 117 aa13.33□□□□□ -0.27
PRKCSH-209ENST00000589838 SOSTDC1Q6X4U4 206 aa13.33□□□□□ -0.27
PRKCSH-209ENST00000589838 FN1P02751 2386 aaKnown RBP13.33□□□□□ -0.28
PRKCSH-209ENST00000589838 HECTD1Q9ULT8 2610 aa13.32□□□□□ -0.28
PRKCSH-209ENST00000589838 WIPF1O43516 503 aa13.32□□□□□ -0.28
PRKCSH-209ENST00000589838 LINC01561Q8N1V8 128 aa13.31□□□□□ -0.28
PRKCSH-209ENST00000589838 LST1O00453 97 aa13.31□□□□□ -0.28
PRKCSH-209ENST00000589838 ATP5G1P05496 136 aa13.31□□□□□ -0.28
PRKCSH-209ENST00000589838 C5orf38Q86SI9 138 aa13.31□□□□□ -0.28
PRKCSH-209ENST00000589838 IBA57-AS1B1ANH7 110 aa13.3□□□□□ -0.28
PRKCSH-209ENST00000589838 H3BT86 120 aa13.3□□□□□ -0.28
PRKCSH-209ENST00000589838 TRAV26-1A0A087WT03 109 aa13.29□□□□□ -0.28
PRKCSH-209ENST00000589838 SCGB1A1P11684 91 aa13.29□□□□□ -0.28
PRKCSH-209ENST00000589838 TRAV13-2A0A0B4J235 113 aa13.29□□□□□ -0.28
PRKCSH-209ENST00000589838 DEFB4AO15263 64 aa13.29□□□□□ -0.28
PRKCSH-209ENST00000589838 SPART-AS1P0CW21 52 aa13.29□□□□□ -0.28
PRKCSH-209ENST00000589838 LINC00158P58513 81 aa13.29□□□□□ -0.28
PRKCSH-209ENST00000589838 Q8NAQ8 132 aa13.29□□□□□ -0.28
PRKCSH-209ENST00000589838 OTOGQ6ZRI0 2925 aa13.28□□□□□ -0.28
PRKCSH-209ENST00000589838 SHISA2Q6UWI4 295 aa13.28□□□□□ -0.28
PRKCSH-209ENST00000589838 C2orf82Q6UX34 121 aa13.28□□□□□ -0.28
PRKCSH-209ENST00000589838 MIR7-3HGQ8N6C7 128 aa13.28□□□□□ -0.28
PRKCSH-209ENST00000589838 CLEC2BQ92478 149 aa13.28□□□□□ -0.28
PRKCSH-209ENST00000589838 A0A096LPF7 62 aa13.27□□□□□ -0.28
PRKCSH-209ENST00000589838 COX7A2LO14548 114 aa13.27□□□□□ -0.28
PRKCSH-209ENST00000589838 C6orf226Q5I0X4 101 aa13.27□□□□□ -0.29
PRKCSH-209ENST00000589838 NSD1Q96L73 2696 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-209ENST00000589838 XCL1P47992 114 aa13.26□□□□□ -0.29
PRKCSH-209ENST00000589838 NTN5Q8WTR8 489 aaPredicted RBP13.26□□□□□ -0.29
PRKCSH-209ENST00000589838 IGHV4-30-4P0DP06 118 aa13.25□□□□□ -0.29
PRKCSH-209ENST00000589838 MRPL23Q16540 153 aaKnown RBP13.25□□□□□ -0.29
PRKCSH-209ENST00000589838 Q8IZM0 81 aa13.25□□□□□ -0.29
PRKCSH-209ENST00000589838 SND1-IT1Q9HBX3 110 aa13.25□□□□□ -0.29
PRKCSH-209ENST00000589838 NOTCH2Q04721 2471 aa13.25□□□□□ -0.29
PRKCSH-209ENST00000589838 CRPP02741 224 aa13.24□□□□□ -0.29
PRKCSH-209ENST00000589838 CDIP1Q9H305 208 aa13.23□□□□□ -0.29
PRKCSH-209ENST00000589838 CELA1Q9UNI1 258 aa13.23□□□□□ -0.29
PRKCSH-209ENST00000589838 UBE2WQ96B02 151 aa13.23□□□□□ -0.29
PRKCSH-209ENST00000589838 CD164L2Q6UWJ8 174 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms