RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 TMEM101Q96IK0 257 aa12.47□□□□□ -0.41
ERCC2-211ENST00000588652 LINC00694P0DN24 101 aa12.46□□□□□ -0.41
ERCC2-211ENST00000588652 IFITM1P13164 125 aa12.46□□□□□ -0.41
ERCC2-211ENST00000588652 NDUFA1O15239 70 aa12.46□□□□□ -0.42
ERCC2-211ENST00000588652 NTM-AS1Q6ZSK4 140 aa12.46□□□□□ -0.42
ERCC2-211ENST00000588652 VWFP04275 2813 aa12.45□□□□□ -0.42
ERCC2-211ENST00000588652 GAGE12JA6NER3 117 aa12.45□□□□□ -0.42
ERCC2-211ENST00000588652 GAGE4Q13068 117 aa12.45□□□□□ -0.42
ERCC2-211ENST00000588652 GAGE5Q13069 117 aa12.45□□□□□ -0.42
ERCC2-211ENST00000588652 RNF183Q96D59 192 aa12.45□□□□□ -0.42
ERCC2-211ENST00000588652 CSDC2Q9Y534 153 aaKnown RBP12.45□□□□□ -0.42
ERCC2-211ENST00000588652 LINC01620Q4KN68 170 aa12.45□□□□□ -0.42
ERCC2-211ENST00000588652 COX6CP09669 75 aa12.44□□□□□ -0.42
ERCC2-211ENST00000588652 LINC00242Q5T6M2 205 aa12.44□□□□□ -0.42
ERCC2-211ENST00000588652 ICOSQ9Y6W8 199 aa12.44□□□□□ -0.42
ERCC2-211ENST00000588652 IGLV5-39A0A0G2JS06 123 aa12.43□□□□□ -0.42
ERCC2-211ENST00000588652 FAM19A3Q7Z5A8 133 aa12.43□□□□□ -0.42
ERCC2-211ENST00000588652 SPATA3Q8NHX4 192 aa12.43□□□□□ -0.42
ERCC2-211ENST00000588652 HIVEP1P15822 2718 aa12.43□□□□□ -0.42
ERCC2-211ENST00000588652 TRBV6-4A0A1B0GX49 114 aa12.42□□□□□ -0.42
ERCC2-211ENST00000588652 DAND5Q8N907 189 aa12.42□□□□□ -0.42
ERCC2-211ENST00000588652 TRAV13-1A0A0B4J241 112 aa12.41□□□□□ -0.42
ERCC2-211ENST00000588652 UBE2L6O14933 153 aa12.41□□□□□ -0.42
ERCC2-211ENST00000588652 LINC01600Q96MT4 127 aa12.41□□□□□ -0.42
ERCC2-211ENST00000588652 Q9H8V8 135 aa12.41□□□□□ -0.42
ERCC2-211ENST00000588652 XGP55808 180 aa12.4□□□□□ -0.42
ERCC2-211ENST00000588652 TRGV4A0A0C4DH28 118 aa12.4□□□□□ -0.42
ERCC2-211ENST00000588652 LOC100131303A0A0U1RQF7 123 aa12.4□□□□□ -0.42
ERCC2-211ENST00000588652 MT-ATP8P03928 68 aa12.4□□□□□ -0.42
ERCC2-211ENST00000588652 TENM1Q9UKZ4 2725 aa12.4□□□□□ -0.43
ERCC2-211ENST00000588652 SMIM1B2RUZ4 78 aa12.39□□□□□ -0.43
ERCC2-211ENST00000588652 TMEM262E9PQX1 116 aa12.39□□□□□ -0.43
ERCC2-211ENST00000588652 TMEM243Q9BU79 118 aa12.39□□□□□ -0.43
ERCC2-211ENST00000588652 CDC42SE2Q9NRR3 84 aa12.39□□□□□ -0.43
ERCC2-211ENST00000588652 TRBV10-2A0A0K0K1G8 114 aa12.39□□□□□ -0.43
ERCC2-211ENST00000588652 CRLF1O75462 422 aa12.39□□□□□ -0.43
ERCC2-211ENST00000588652 C9orf66Q5T8R8 295 aa12.39□□□□□ -0.43
ERCC2-211ENST00000588652 COPS9Q8WXC6 57 aa12.39□□□□□ -0.43
ERCC2-211ENST00000588652 RPL13AP40429 203 aaKnown RBP12.38□□□□□ -0.43
ERCC2-211ENST00000588652 NTN5Q8WTR8 489 aaPredicted RBP12.38□□□□□ -0.43
ERCC2-211ENST00000588652 FHL2Q14192 279 aa12.38□□□□□ -0.43
ERCC2-211ENST00000588652 ZNF625Q96I27 306 aaPredicted RBP12.37□□□□□ -0.43
ERCC2-211ENST00000588652 LINC00308Q8TCZ7 52 aa12.36□□□□□ -0.43
ERCC2-211ENST00000588652 F5H768 121 aa12.36□□□□□ -0.43
ERCC2-211ENST00000588652 KIR2DL5BQ8NHK3 375 aa12.36□□□□□ -0.43
ERCC2-211ENST00000588652 CLEC2BQ92478 149 aa12.36□□□□□ -0.43
ERCC2-211ENST00000588652 MEIG1Q5JSS6 88 aa12.35□□□□□ -0.43
ERCC2-211ENST00000588652 PRIMA1Q86XR5 153 aa12.35□□□□□ -0.43
ERCC2-211ENST00000588652 A0A0U1RRA0 63 aa12.35□□□□□ -0.43
ERCC2-211ENST00000588652 CITED1Q99966 193 aa12.35□□□□□ -0.43
ERCC2-211ENST00000588652 X6R8D5 127 aa12.35□□□□□ -0.43
ERCC2-211ENST00000588652 H7C423 109 aa12.34□□□□□ -0.43
ERCC2-211ENST00000588652 DEFB130BP0DP73 79 aa12.34□□□□□ -0.43
ERCC2-211ENST00000588652 DEFB130AP0DP74 79 aa12.34□□□□□ -0.43
ERCC2-211ENST00000588652 HERV-K104P63124 156 aa12.33□□□□□ -0.43
ERCC2-211ENST00000588652 C2orf82Q6UX34 121 aa12.33□□□□□ -0.43
ERCC2-211ENST00000588652 LINC00612Q8N6U2 182 aa12.33□□□□□ -0.43
ERCC2-211ENST00000588652 LST1O00453 97 aa12.33□□□□□ -0.44
ERCC2-211ENST00000588652 TEX49A0A1B0GTD5 131 aa12.32□□□□□ -0.44
ERCC2-211ENST00000588652 SOSTDC1Q6X4U4 206 aa12.32□□□□□ -0.44
ERCC2-211ENST00000588652 ATRQ13535 2644 aa12.32□□□□□ -0.44
ERCC2-211ENST00000588652 A0A1B0GV72 72 aa12.32□□□□□ -0.44
ERCC2-211ENST00000588652 NBEAL2Q6ZNJ1 2754 aa12.32□□□□□ -0.44
ERCC2-211ENST00000588652 H3BT86 120 aa12.31□□□□□ -0.44
ERCC2-211ENST00000588652 TEP1Q99973 2627 aaKnown RBP12.31□□□□□ -0.44
ERCC2-211ENST00000588652 SMIM9A6NGZ8 99 aa12.31□□□□□ -0.44
ERCC2-211ENST00000588652 UBE2WQ96B02 151 aa12.31□□□□□ -0.44
ERCC2-211ENST00000588652 TRBV6-8A0A0A6YYG3 113 aa12.3□□□□□ -0.44
ERCC2-211ENST00000588652 CKS1BP61024 79 aa12.3□□□□□ -0.44
ERCC2-211ENST00000588652 GAGE6Q13070 117 aa12.29□□□□□ -0.44
ERCC2-211ENST00000588652 TRAV8-4A0A0B4J246 113 aa12.27□□□□□ -0.45
ERCC2-211ENST00000588652 DEFB135Q30KP9 77 aa12.27□□□□□ -0.45
ERCC2-211ENST00000588652 CHCHD5Q9BSY4 110 aa12.26□□□□□ -0.45
ERCC2-211ENST00000588652 IGKV3OR2-268A0A0C4DH90 116 aa12.26□□□□□ -0.45
ERCC2-211ENST00000588652 COX7B2Q8TF08 81 aa12.26□□□□□ -0.45
ERCC2-211ENST00000588652 IGLV4-60A0A075B6I1 120 aa12.25□□□□□ -0.45
ERCC2-211ENST00000588652 FAM222AQ5U5X8 452 aa12.25□□□□□ -0.45
ERCC2-211ENST00000588652 TRRAPQ9Y4A5 3859 aa12.25□□□□□ -0.45
ERCC2-211ENST00000588652 GYPEP15421 78 aa12.25□□□□□ -0.45
ERCC2-211ENST00000588652 APOC4P55056 127 aa12.25□□□□□ -0.45
ERCC2-211ENST00000588652 SHISA2Q6UWI4 295 aa12.25□□□□□ -0.45
ERCC2-211ENST00000588652 PPDPFQ9H3Y8 114 aa12.25□□□□□ -0.45
ERCC2-211ENST00000588652 COX7A2LO14548 114 aa12.24□□□□□ -0.45
ERCC2-211ENST00000588652 WFDC9Q8NEX5 89 aa12.24□□□□□ -0.45
ERCC2-211ENST00000588652 LYRM9A8MSI8 78 aa12.23□□□□□ -0.45
ERCC2-211ENST00000588652 TOMM7Q9P0U1 55 aa12.23□□□□□ -0.45
ERCC2-211ENST00000588652 PRO0255Q9UI72 69 aa12.23□□□□□ -0.45
ERCC2-211ENST00000588652 DEFB4AO15263 64 aa12.21□□□□□ -0.45
ERCC2-211ENST00000588652 SNCGO76070 127 aa12.21□□□□□ -0.45
ERCC2-211ENST00000588652 DEFB121Q5J5C9 76 aa12.21□□□□□ -0.45
ERCC2-211ENST00000588652 IGHV4-28A0A0C4DH34 117 aa12.2□□□□□ -0.46
ERCC2-211ENST00000588652 WIPF1O43516 503 aa12.2□□□□□ -0.46
ERCC2-211ENST00000588652 F8P00451 2351 aa12.2□□□□□ -0.46
ERCC2-211ENST00000588652 TRAV13-2A0A0B4J235 113 aa12.19□□□□□ -0.46
ERCC2-211ENST00000588652 IGHV3OR16-9A0A0B4J2B5 98 aa12.18□□□□□ -0.46
ERCC2-211ENST00000588652 MIR7-3HGQ8N6C7 128 aa12.18□□□□□ -0.46
ERCC2-211ENST00000588652 PAX4O43316 350 aa12.18□□□□□ -0.46
ERCC2-211ENST00000588652 LINC00158P58513 81 aa12.18□□□□□ -0.46
ERCC2-211ENST00000588652 A0A087WZ39 114 aa12.17□□□□□ -0.46
ERCC2-211ENST00000588652 CRPP02741 224 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms