RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 TM2D2Q9BX73 214 aa11.36□□□□□ -0.59
NFIX-210ENST00000588228 NOTCH1P46531 2555 aa11.36□□□□□ -0.59
NFIX-210ENST00000588228 SMIM1B2RUZ4 78 aa11.36□□□□□ -0.59
NFIX-210ENST00000588228 A6NDN8 102 aa11.35□□□□□ -0.59
NFIX-210ENST00000588228 ZFAND6Q6FIF0 208 aa11.35□□□□□ -0.59
NFIX-210ENST00000588228 NDUFA12Q9UI09 145 aa11.35□□□□□ -0.59
NFIX-210ENST00000588228 TRAV10A0A0B4J240 114 aa11.34□□□□□ -0.59
NFIX-210ENST00000588228 CCL25O15444 150 aa11.34□□□□□ -0.59
NFIX-210ENST00000588228 SS18Q15532 418 aa11.34□□□□□ -0.59
NFIX-210ENST00000588228 C10orf126Q8N4M7 172 aa11.34□□□□□ -0.59
NFIX-210ENST00000588228 SPANXB1Q9NS25 103 aaPredicted RBP11.34□□□□□ -0.59
NFIX-210ENST00000588228 NBEAL1Q6ZS30 2694 aa11.33□□□□□ -0.6
NFIX-210ENST00000588228 IGHV3OR16-9A0A0B4J2B5 98 aa11.33□□□□□ -0.6
NFIX-210ENST00000588228 FXYD2P54710 66 aa11.33□□□□□ -0.6
NFIX-210ENST00000588228 ANGP03950 147 aaKnown RBP11.33□□□□□ -0.6
NFIX-210ENST00000588228 MGAM2Q2M2H8 2515 aa11.32□□□□□ -0.6
NFIX-210ENST00000588228 A0A0J9YXY3 114 aa11.32□□□□□ -0.6
NFIX-210ENST00000588228 SRSF9Q13242 221 aaKnown RBP eCLIP11.32□□□□□ -0.6
NFIX-210ENST00000588228 LINC00269Q8N2A0 174 aa11.32□□□□□ -0.6
NFIX-210ENST00000588228 NDUFA1O15239 70 aa11.31□□□□□ -0.6
NFIX-210ENST00000588228 PTTG1IPP53801 180 aa11.31□□□□□ -0.6
NFIX-210ENST00000588228 Q8N3U1 123 aa11.31□□□□□ -0.6
NFIX-210ENST00000588228 B9D2Q9BPU9 175 aa11.31□□□□□ -0.6
NFIX-210ENST00000588228 A0A087WZ39 114 aa11.3□□□□□ -0.6
NFIX-210ENST00000588228 TAX1BP3O14907 124 aa11.3□□□□□ -0.6
NFIX-210ENST00000588228 CLPSL2Q6UWE3 100 aa11.3□□□□□ -0.6
NFIX-210ENST00000588228 HUWE1Q7Z6Z7 4374 aaKnown RBP11.3□□□□□ -0.6
NFIX-210ENST00000588228 TMEM238C9JI98 176 aa11.3□□□□□ -0.6
NFIX-210ENST00000588228 K7EP13 123 aa11.3□□□□□ -0.6
NFIX-210ENST00000588228 REG3AQ06141 175 aa11.3□□□□□ -0.6
NFIX-210ENST00000588228 TENM3Q9P273 2699 aa11.29□□□□□ -0.6
NFIX-210ENST00000588228 C15orf53Q8NAA6 179 aa11.29□□□□□ -0.6
NFIX-210ENST00000588228 XCL1P47992 114 aa11.28□□□□□ -0.6
NFIX-210ENST00000588228 ESRGQ1W209 222 aa11.28□□□□□ -0.6
NFIX-210ENST00000588228 COX11Q9Y6N1 276 aa11.28□□□□□ -0.6
NFIX-210ENST00000588228 IGHV3-30P01768 117 aa11.27□□□□□ -0.6
NFIX-210ENST00000588228 IGHV3-30-5P0DP03 117 aa11.27□□□□□ -0.6
NFIX-210ENST00000588228 LINC01561Q8N1V8 128 aa11.27□□□□□ -0.6
NFIX-210ENST00000588228 PRR34Q9NV39 138 aa11.27□□□□□ -0.6
NFIX-210ENST00000588228 TMEM238LA0A1B0GVL6 79 aa11.27□□□□□ -0.61
NFIX-210ENST00000588228 A6NJY4 79 aa11.27□□□□□ -0.61
NFIX-210ENST00000588228 SMIM13P0DJ93 91 aa11.27□□□□□ -0.61
NFIX-210ENST00000588228 CD164L2Q6UWJ8 174 aa11.27□□□□□ -0.61
NFIX-210ENST00000588228 C5orf38Q86SI9 138 aa11.27□□□□□ -0.61
NFIX-210ENST00000588228 Q9H8V8 135 aa11.27□□□□□ -0.61
NFIX-210ENST00000588228 NHP2Q9NX24 153 aaKnown RBP11.27□□□□□ -0.61
NFIX-210ENST00000588228 TIMM17BO60830 172 aa11.26□□□□□ -0.61
NFIX-210ENST00000588228 Q6ZVH6 145 aa11.26□□□□□ -0.61
NFIX-210ENST00000588228 WFDC10BQ8IUB3 73 aa11.26□□□□□ -0.61
NFIX-210ENST00000588228 COX7B2Q8TF08 81 aa11.26□□□□□ -0.61
NFIX-210ENST00000588228 CHCHD10Q8WYQ3 142 aaPredicted RBP11.26□□□□□ -0.61
NFIX-210ENST00000588228 LITAFQ99732 161 aa11.26□□□□□ -0.61
NFIX-210ENST00000588228 ZNF625Q96I27 306 aaPredicted RBP11.25□□□□□ -0.61
NFIX-210ENST00000588228 KLK12Q9UKR0 248 aa11.25□□□□□ -0.61
NFIX-210ENST00000588228 HERV-K104P63124 156 aa11.24□□□□□ -0.61
NFIX-210ENST00000588228 SPANXDQ9BXN6 97 aa11.24□□□□□ -0.61
NFIX-210ENST00000588228 SPANXCQ9NY87 97 aa11.24□□□□□ -0.61
NFIX-210ENST00000588228 A0A1B0GWB2 263 aa11.24□□□□□ -0.61
NFIX-210ENST00000588228 IGHV3-33P01772 117 aa11.24□□□□□ -0.61
NFIX-210ENST00000588228 KRTAP21-3Q3LHN1 58 aa11.24□□□□□ -0.61
NFIX-210ENST00000588228 IGLV10-54A0A075B6I4 117 aa11.22□□□□□ -0.61
NFIX-210ENST00000588228 COX7A2LO14548 114 aa11.22□□□□□ -0.61
NFIX-210ENST00000588228 CIRBPQ14011 172 aaKnown RBP11.22□□□□□ -0.61
NFIX-210ENST00000588228 ENHOQ6UWT2 76 aa11.22□□□□□ -0.61
NFIX-210ENST00000588228 TOMM7Q9P0U1 55 aa11.22□□□□□ -0.61
NFIX-210ENST00000588228 C9orf118A6NHY6 69 aa11.21□□□□□ -0.61
NFIX-210ENST00000588228 K7ERJ3 54 aa11.21□□□□□ -0.61
NFIX-210ENST00000588228 CRPP02741 224 aa11.21□□□□□ -0.61
NFIX-210ENST00000588228 NHLRC4P0CG21 123 aaPredicted RBP11.21□□□□□ -0.61
NFIX-210ENST00000588228 MIAQ16674 131 aa11.21□□□□□ -0.61
NFIX-210ENST00000588228 RAB37Q96AX2 223 aa11.21□□□□□ -0.61
NFIX-210ENST00000588228 TRAV8-4A0A0B4J246 113 aa11.2□□□□□ -0.62
NFIX-210ENST00000588228 FOXI1Q12951 378 aa11.2□□□□□ -0.62
NFIX-210ENST00000588228 ADAMTSL4-AS1Q5T5F5 129 aa11.2□□□□□ -0.62
NFIX-210ENST00000588228 SFTA2Q6UW10 78 aa11.2□□□□□ -0.62
NFIX-210ENST00000588228 MUSTN1Q8IVN3 82 aa11.2□□□□□ -0.62
NFIX-210ENST00000588228 DNAH9Q9NYC9 4486 aa11.2□□□□□ -0.62
NFIX-210ENST00000588228 RPL24P83731 157 aaKnown RBP11.2□□□□□ -0.62
NFIX-210ENST00000588228 LINC01556Q5JQF7 62 aa11.2□□□□□ -0.62
NFIX-210ENST00000588228 DNHD1Q96M86 4753 aa11.19□□□□□ -0.62
NFIX-210ENST00000588228 IGLL5B9A064 214 aa11.19□□□□□ -0.62
NFIX-210ENST00000588228 Q8IZM0 81 aa11.19□□□□□ -0.62
NFIX-210ENST00000588228 UBE2WQ96B02 151 aa11.19□□□□□ -0.62
NFIX-210ENST00000588228 IFITM1P13164 125 aa11.18□□□□□ -0.62
NFIX-210ENST00000588228 GAGE12HA6NDE8 117 aa11.17□□□□□ -0.62
NFIX-210ENST00000588228 PRSS2P07478 247 aa11.17□□□□□ -0.62
NFIX-210ENST00000588228 MALP21145 153 aa11.17□□□□□ -0.62
NFIX-210ENST00000588228 MEIG1Q5JSS6 88 aa11.17□□□□□ -0.62
NFIX-210ENST00000588228 A4D1N5 150 aa11.17□□□□□ -0.62
NFIX-210ENST00000588228 H3BUT2 72 aa11.17□□□□□ -0.62
NFIX-210ENST00000588228 DNAH10OSP0CZ25 163 aa11.17□□□□□ -0.62
NFIX-210ENST00000588228 C6orf226Q5I0X4 101 aa11.17□□□□□ -0.62
NFIX-210ENST00000588228 CCL18P55774 89 aa11.16□□□□□ -0.62
NFIX-210ENST00000588228 LINC00588Q9Y4M8 146 aa11.16□□□□□ -0.62
NFIX-210ENST00000588228 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.15□□□□□ -0.62
NFIX-210ENST00000588228 APOMO95445 188 aa11.15□□□□□ -0.62
NFIX-210ENST00000588228 CFC1BP0CG36 223 aa11.15□□□□□ -0.62
NFIX-210ENST00000588228 CFC1P0CG37 223 aa11.15□□□□□ -0.62
NFIX-210ENST00000588228 VAMP3Q15836 100 aa11.15□□□□□ -0.62
NFIX-210ENST00000588228 CXCL5P42830 114 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms