RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 ATP6V0E2Q8NHE4 81 aa12.89□□□□□ -0.35
RETREG3-205ENST00000586870 DAD1P61803 113 aa12.88□□□□□ -0.35
RETREG3-205ENST00000586870 CASC10Q5T4H9 136 aa12.88□□□□□ -0.35
RETREG3-205ENST00000586870 VSIG2Q96IQ7 327 aa12.88□□□□□ -0.35
RETREG3-205ENST00000586870 NHP2Q9NX24 153 aaKnown RBP12.88□□□□□ -0.35
RETREG3-205ENST00000586870 LINC00242Q5T6M2 205 aa12.88□□□□□ -0.35
RETREG3-205ENST00000586870 RAB37Q96AX2 223 aa12.88□□□□□ -0.35
RETREG3-205ENST00000586870 TEX48A0A1B0GUV7 120 aa12.87□□□□□ -0.35
RETREG3-205ENST00000586870 TRAV8-3A0A0A6YYJ7 113 aa12.86□□□□□ -0.35
RETREG3-205ENST00000586870 TMEM238LA0A1B0GVL6 79 aa12.86□□□□□ -0.35
RETREG3-205ENST00000586870 A0A1B0GWB2 263 aa12.86□□□□□ -0.35
RETREG3-205ENST00000586870 A6NJY4 79 aa12.86□□□□□ -0.35
RETREG3-205ENST00000586870 PAX4O43316 350 aa12.86□□□□□ -0.35
RETREG3-205ENST00000586870 GAGE6Q13070 117 aa12.86□□□□□ -0.35
RETREG3-205ENST00000586870 C12orf74Q32Q52 190 aa12.86□□□□□ -0.35
RETREG3-205ENST00000586870 CDKN2A-AS1Q9UH64 79 aa12.86□□□□□ -0.35
RETREG3-205ENST00000586870 SPINK8P0C7L1 97 aa12.85□□□□□ -0.35
RETREG3-205ENST00000586870 CHCHD5Q9BSY4 110 aa12.85□□□□□ -0.35
RETREG3-205ENST00000586870 CELA1Q9UNI1 258 aa12.85□□□□□ -0.35
RETREG3-205ENST00000586870 NUPR2A6NF83 97 aa12.84□□□□□ -0.35
RETREG3-205ENST00000586870 H3BUT2 72 aa12.84□□□□□ -0.35
RETREG3-205ENST00000586870 ATP5G1P05496 136 aa12.84□□□□□ -0.35
RETREG3-205ENST00000586870 COX6A2Q02221 97 aa12.84□□□□□ -0.35
RETREG3-205ENST00000586870 CCL25O15444 150 aa12.84□□□□□ -0.35
RETREG3-205ENST00000586870 KLK5Q9Y337 293 aaPredicted RBP12.84□□□□□ -0.35
RETREG3-205ENST00000586870 TRAV13-1A0A0B4J241 112 aa12.83□□□□□ -0.36
RETREG3-205ENST00000586870 C10orf126Q8N4M7 172 aa12.83□□□□□ -0.36
RETREG3-205ENST00000586870 A0A0J9YXY3 114 aa12.82□□□□□ -0.36
RETREG3-205ENST00000586870 K7ERJ3 54 aa12.82□□□□□ -0.36
RETREG3-205ENST00000586870 IGHV3-30P01768 117 aa12.82□□□□□ -0.36
RETREG3-205ENST00000586870 IGHV3-30-5P0DP03 117 aa12.82□□□□□ -0.36
RETREG3-205ENST00000586870 NDUFA12Q9UI09 145 aa12.82□□□□□ -0.36
RETREG3-205ENST00000586870 TMEM238C9JI98 176 aa12.81□□□□□ -0.36
RETREG3-205ENST00000586870 Q6ZTC4 211 aa12.81□□□□□ -0.36
RETREG3-205ENST00000586870 TRAV10A0A0B4J240 114 aa12.8□□□□□ -0.36
RETREG3-205ENST00000586870 IGLV5-39A0A0G2JS06 123 aa12.8□□□□□ -0.36
RETREG3-205ENST00000586870 A0A1W2PPM0 123 aa12.8□□□□□ -0.36
RETREG3-205ENST00000586870 KMT2CQ8NEZ4 4911 aaKnown RBP12.8□□□□□ -0.36
RETREG3-205ENST00000586870 GTF2H5Q6ZYL4 71 aa12.8□□□□□ -0.36
RETREG3-205ENST00000586870 IGLV4-60A0A075B6I1 120 aa12.79□□□□□ -0.36
RETREG3-205ENST00000586870 GAGE10A6NGK3 116 aa12.79□□□□□ -0.36
RETREG3-205ENST00000586870 IGLL5B9A064 214 aa12.79□□□□□ -0.36
RETREG3-205ENST00000586870 TRAV26-1A0A087WT03 109 aa12.78□□□□□ -0.36
RETREG3-205ENST00000586870 DEFB131BA0A096LNP1 70 aa12.78□□□□□ -0.36
RETREG3-205ENST00000586870 A0A1B0GUV1 79 aa12.78□□□□□ -0.36
RETREG3-205ENST00000586870 FABP2P12104 132 aa12.78□□□□□ -0.36
RETREG3-205ENST00000586870 HTN3P15516 51 aa12.78□□□□□ -0.36
RETREG3-205ENST00000586870 NAA38Q9BRA0 125 aaKnown RBP12.78□□□□□ -0.36
RETREG3-205ENST00000586870 F5H768 121 aa12.77□□□□□ -0.36
RETREG3-205ENST00000586870 NDUFA1O15239 70 aa12.77□□□□□ -0.36
RETREG3-205ENST00000586870 SMIM1B2RUZ4 78 aa12.77□□□□□ -0.37
RETREG3-205ENST00000586870 K7EP34 96 aa12.77□□□□□ -0.37
RETREG3-205ENST00000586870 TIMM17BO60830 172 aa12.76□□□□□ -0.37
RETREG3-205ENST00000586870 SH2D6Q7Z4S9 175 aa12.76□□□□□ -0.37
RETREG3-205ENST00000586870 MRPL23Q16540 153 aaKnown RBP12.75□□□□□ -0.37
RETREG3-205ENST00000586870 LITAFQ99732 161 aa12.75□□□□□ -0.37
RETREG3-205ENST00000586870 SPANXDQ9BXN6 97 aa12.75□□□□□ -0.37
RETREG3-205ENST00000586870 SPANXCQ9NY87 97 aa12.75□□□□□ -0.37
RETREG3-205ENST00000586870 DNAH7Q8WXX0 4024 aa12.74□□□□□ -0.37
RETREG3-205ENST00000586870 A0A096LPF7 62 aa12.74□□□□□ -0.37
RETREG3-205ENST00000586870 TMEM262E9PQX1 116 aa12.74□□□□□ -0.37
RETREG3-205ENST00000586870 RPL24P83731 157 aaKnown RBP12.74□□□□□ -0.37
RETREG3-205ENST00000586870 SPCS1Q9Y6A9 102 aa12.74□□□□□ -0.37
RETREG3-205ENST00000586870 RBX1P62877 108 aa12.73□□□□□ -0.37
RETREG3-205ENST00000586870 MUSTN1Q8IVN3 82 aa12.73□□□□□ -0.37
RETREG3-205ENST00000586870 ICOSQ9Y6W8 199 aa12.73□□□□□ -0.37
RETREG3-205ENST00000586870 LINC00959A0A1B0GUT2 108 aa12.71□□□□□ -0.37
RETREG3-205ENST00000586870 APOMO95445 188 aa12.71□□□□□ -0.37
RETREG3-205ENST00000586870 CFC1BP0CG36 223 aa12.71□□□□□ -0.37
RETREG3-205ENST00000586870 CFC1P0CG37 223 aa12.71□□□□□ -0.37
RETREG3-205ENST00000586870 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.7□□□□□ -0.38
RETREG3-205ENST00000586870 IGKV3OR2-268A0A0C4DH90 116 aa12.7□□□□□ -0.38
RETREG3-205ENST00000586870 A4D1N5 150 aa12.7□□□□□ -0.38
RETREG3-205ENST00000586870 CIRBPQ14011 172 aaKnown RBP12.7□□□□□ -0.38
RETREG3-205ENST00000586870 MIAQ16674 131 aa12.7□□□□□ -0.38
RETREG3-205ENST00000586870 Q9H8V8 135 aa12.7□□□□□ -0.38
RETREG3-205ENST00000586870 PGPEP1Q9NXJ5 209 aa12.7□□□□□ -0.38
RETREG3-205ENST00000586870 IGHV3OR16-9A0A0B4J2B5 98 aa12.7□□□□□ -0.38
RETREG3-205ENST00000586870 HERV-K104P63124 156 aa12.7□□□□□ -0.38
RETREG3-205ENST00000586870 ADAMTSL4-AS1Q5T5F5 129 aa12.7□□□□□ -0.38
RETREG3-205ENST00000586870 RYR3Q15413 4870 aa12.69□□□□□ -0.38
RETREG3-205ENST00000586870 IFITM1P13164 125 aa12.69□□□□□ -0.38
RETREG3-205ENST00000586870 SS18Q15532 418 aa12.69□□□□□ -0.38
RETREG3-205ENST00000586870 A0A0B4J2C4 111 aa12.68□□□□□ -0.38
RETREG3-205ENST00000586870 PRSS2P07478 247 aa12.68□□□□□ -0.38
RETREG3-205ENST00000586870 LELP1Q5T871 98 aa12.68□□□□□ -0.38
RETREG3-205ENST00000586870 ZNF625Q96I27 306 aaPredicted RBP12.68□□□□□ -0.38
RETREG3-205ENST00000586870 PRO1854Q9UHT4 67 aa12.68□□□□□ -0.38
RETREG3-205ENST00000586870 A0A087WZ39 114 aa12.67□□□□□ -0.38
RETREG3-205ENST00000586870 H3BNG1 76 aa12.67□□□□□ -0.38
RETREG3-205ENST00000586870 COX7B2Q8TF08 81 aa12.66□□□□□ -0.38
RETREG3-205ENST00000586870 TSPAN13O95857 204 aa12.66□□□□□ -0.38
RETREG3-205ENST00000586870 LINC01561Q8N1V8 128 aa12.66□□□□□ -0.38
RETREG3-205ENST00000586870 LY6G6CO95867 125 aa12.65□□□□□ -0.38
RETREG3-205ENST00000586870 APLNQ9ULZ1 77 aa12.65□□□□□ -0.38
RETREG3-205ENST00000586870 LCE6AA0A183 80 aa12.63□□□□□ -0.39
RETREG3-205ENST00000586870 COPS9Q8WXC6 57 aa12.63□□□□□ -0.39
RETREG3-205ENST00000586870 LYRM7Q5U5X0 104 aa12.62□□□□□ -0.39
RETREG3-205ENST00000586870 C5orf38Q86SI9 138 aa12.62□□□□□ -0.39
RETREG3-205ENST00000586870 STARD9Q9P2P6 4700 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms