RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 RPL24P83731 157 aaKnown RBP7.9□□□□□ -1.14
LIG3-204ENST00000585740 EGFEM1PQ0D2K5 195 aa7.9□□□□□ -1.14
LIG3-204ENST00000585740 GAGE6Q13070 117 aa7.9□□□□□ -1.14
LIG3-204ENST00000585740 CHCHD5Q9BSY4 110 aa7.9□□□□□ -1.14
LIG3-204ENST00000585740 CDKN2A-AS1Q9UH64 79 aa7.9□□□□□ -1.14
LIG3-204ENST00000585740 TRAV8-3A0A0A6YYJ7 113 aa7.89□□□□□ -1.15
LIG3-204ENST00000585740 TRAV13-1A0A0B4J241 112 aa7.89□□□□□ -1.15
LIG3-204ENST00000585740 IGLV5-39A0A0G2JS06 123 aa7.89□□□□□ -1.15
LIG3-204ENST00000585740 K7ERJ3 54 aa7.89□□□□□ -1.15
LIG3-204ENST00000585740 SH2D6Q7Z4S9 175 aa7.89□□□□□ -1.15
LIG3-204ENST00000585740 SPANXDQ9BXN6 97 aa7.89□□□□□ -1.15
LIG3-204ENST00000585740 SPANXCQ9NY87 97 aa7.89□□□□□ -1.15
LIG3-204ENST00000585740 SPCS1Q9Y6A9 102 aa7.89□□□□□ -1.15
LIG3-204ENST00000585740 VWFP04275 2813 aa7.89□□□□□ -1.15
LIG3-204ENST00000585740 NBEAL2Q6ZNJ1 2754 aa7.89□□□□□ -1.15
LIG3-204ENST00000585740 TRAV26-1A0A087WT03 109 aa7.88□□□□□ -1.15
LIG3-204ENST00000585740 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.88□□□□□ -1.15
LIG3-204ENST00000585740 NDUFA1O15239 70 aa7.88□□□□□ -1.15
LIG3-204ENST00000585740 COX6A2Q02221 97 aa7.88□□□□□ -1.15
LIG3-204ENST00000585740 C10orf126Q8N4M7 172 aa7.88□□□□□ -1.15
LIG3-204ENST00000585740 A0A1B0GUV1 79 aa7.87□□□□□ -1.15
LIG3-204ENST00000585740 CIRBPQ14011 172 aaKnown RBP7.87□□□□□ -1.15
LIG3-204ENST00000585740 LYRM7Q5U5X0 104 aa7.87□□□□□ -1.15
LIG3-204ENST00000585740 COPS9Q8WXC6 57 aa7.87□□□□□ -1.15
LIG3-204ENST00000585740 IFITM1P13164 125 aa7.86□□□□□ -1.15
LIG3-204ENST00000585740 OXLD1Q5BKU9 147 aa7.86□□□□□ -1.15
LIG3-204ENST00000585740 NAA38Q9BRA0 125 aaKnown RBP7.86□□□□□ -1.15
LIG3-204ENST00000585740 A0A0B4J2C4 111 aa7.85□□□□□ -1.15
LIG3-204ENST00000585740 SMIM1B2RUZ4 78 aa7.85□□□□□ -1.15
LIG3-204ENST00000585740 HERV-K104P63124 156 aa7.85□□□□□ -1.15
LIG3-204ENST00000585740 MRPL23Q16540 153 aaKnown RBP7.85□□□□□ -1.15
LIG3-204ENST00000585740 MUSTN1Q8IVN3 82 aa7.85□□□□□ -1.15
LIG3-204ENST00000585740 KMT2CQ8NEZ4 4911 aaKnown RBP7.84□□□□□ -1.15
LIG3-204ENST00000585740 IGLV4-60A0A075B6I1 120 aa7.84□□□□□ -1.15
LIG3-204ENST00000585740 F5H768 121 aa7.84□□□□□ -1.15
LIG3-204ENST00000585740 DEFB4AO15263 64 aa7.84□□□□□ -1.15
LIG3-204ENST00000585740 APOMO95445 188 aa7.84□□□□□ -1.15
LIG3-204ENST00000585740 CFC1BP0CG36 223 aa7.84□□□□□ -1.15
LIG3-204ENST00000585740 CFC1P0CG37 223 aa7.84□□□□□ -1.15
LIG3-204ENST00000585740 KRTAP10-11P60412 298 aa7.84□□□□□ -1.15
LIG3-204ENST00000585740 MIAQ16674 131 aa7.84□□□□□ -1.15
LIG3-204ENST00000585740 LINC01561Q8N1V8 128 aa7.84□□□□□ -1.15
LIG3-204ENST00000585740 LITAFQ99732 161 aa7.84□□□□□ -1.15
LIG3-204ENST00000585740 PGPEP1Q9NXJ5 209 aa7.84□□□□□ -1.15
LIG3-204ENST00000585740 CELA1Q9UNI1 258 aa7.84□□□□□ -1.15
LIG3-204ENST00000585740 ICOSQ9Y6W8 199 aa7.84□□□□□ -1.15
LIG3-204ENST00000585740 A4D1N5 150 aa7.83□□□□□ -1.16
LIG3-204ENST00000585740 TMEM262E9PQX1 116 aa7.83□□□□□ -1.16
LIG3-204ENST00000585740 SS18Q15532 418 aa7.83□□□□□ -1.16
LIG3-204ENST00000585740 SFTA2Q6UW10 78 aa7.83□□□□□ -1.16
LIG3-204ENST00000585740 PRO1854Q9UHT4 67 aa7.83□□□□□ -1.16
LIG3-204ENST00000585740 RYR3Q15413 4870 aa7.82□□□□□ -1.16
LIG3-204ENST00000585740 RBX1P62877 108 aa7.82□□□□□ -1.16
LIG3-204ENST00000585740 C11orf68Q9H3H3 251 aaKnown RBP7.82□□□□□ -1.16
LIG3-204ENST00000585740 PPDPFQ9H3Y8 114 aa7.82□□□□□ -1.16
LIG3-204ENST00000585740 Q9H8V8 135 aa7.82□□□□□ -1.16
LIG3-204ENST00000585740 CMYA5Q8N3K9 4069 aa7.82□□□□□ -1.16
LIG3-204ENST00000585740 LINC00959A0A1B0GUT2 108 aa7.81□□□□□ -1.16
LIG3-204ENST00000585740 TSPAN13O95857 204 aa7.81□□□□□ -1.16
LIG3-204ENST00000585740 PRSS2P07478 247 aa7.81□□□□□ -1.16
LIG3-204ENST00000585740 LELP1Q5T871 98 aa7.81□□□□□ -1.16
LIG3-204ENST00000585740 COX7B2Q8TF08 81 aa7.81□□□□□ -1.16
LIG3-204ENST00000585740 A0A087WZ39 114 aa7.8□□□□□ -1.16
LIG3-204ENST00000585740 IGHV3OR16-9A0A0B4J2B5 98 aa7.8□□□□□ -1.16
LIG3-204ENST00000585740 IGKV3OR2-268A0A0C4DH90 116 aa7.8□□□□□ -1.16
LIG3-204ENST00000585740 H3BNG1 76 aa7.8□□□□□ -1.16
LIG3-204ENST00000585740 ZNF625Q96I27 306 aaPredicted RBP7.8□□□□□ -1.16
LIG3-204ENST00000585740 ERG28Q9UKR5 140 aa7.8□□□□□ -1.16
LIG3-204ENST00000585740 A0A096LPF7 62 aa7.79□□□□□ -1.16
LIG3-204ENST00000585740 HTN3P15516 51 aa7.79□□□□□ -1.16
LIG3-204ENST00000585740 MEIG1Q5JSS6 88 aa7.79□□□□□ -1.16
LIG3-204ENST00000585740 TRBV20-1A0A075B6N2 111 aa7.78□□□□□ -1.16
LIG3-204ENST00000585740 F8W1H4 67 aa7.78□□□□□ -1.16
LIG3-204ENST00000585740 IGHV3-33P01772 117 aa7.78□□□□□ -1.16
LIG3-204ENST00000585740 ADAMTSL4-AS1Q5T5F5 129 aa7.78□□□□□ -1.16
LIG3-204ENST00000585740 LOC107984156A0A0G2JMH3 177 aa7.77□□□□□ -1.17
LIG3-204ENST00000585740 ARL17AQ8IVW1 177 aa7.77□□□□□ -1.17
LIG3-204ENST00000585740 SCGB1C2P0DMR2 95 aa7.76□□□□□ -1.17
LIG3-204ENST00000585740 Q1RN00 199 aa7.76□□□□□ -1.17
LIG3-204ENST00000585740 LINC00308Q8TCZ7 52 aa7.76□□□□□ -1.17
LIG3-204ENST00000585740 G3V4G9 280 aa7.75□□□□□ -1.17
LIG3-204ENST00000585740 ANGP03950 147 aaKnown RBP7.75□□□□□ -1.17
LIG3-204ENST00000585740 PSMB2P49721 201 aa7.75□□□□□ -1.17
LIG3-204ENST00000585740 CD164L2Q6UWJ8 174 aa7.75□□□□□ -1.17
LIG3-204ENST00000585740 C5orf38Q86SI9 138 aa7.75□□□□□ -1.17
LIG3-204ENST00000585740 RETNQ9HD89 108 aa7.75□□□□□ -1.17
LIG3-204ENST00000585740 TOMM7Q9P0U1 55 aa7.75□□□□□ -1.17
LIG3-204ENST00000585740 DNAH3Q8TD57 4116 aa7.74□□□□□ -1.17
LIG3-204ENST00000585740 IBA57-AS1B1ANH7 110 aa7.74□□□□□ -1.17
LIG3-204ENST00000585740 K7ERU9 68 aa7.74□□□□□ -1.17
LIG3-204ENST00000585740 CXCL5P42830 114 aa7.74□□□□□ -1.17
LIG3-204ENST00000585740 XCL1P47992 114 aa7.74□□□□□ -1.17
LIG3-204ENST00000585740 REG3AQ06141 175 aa7.74□□□□□ -1.17
LIG3-204ENST00000585740 Q8IZM0 81 aa7.74□□□□□ -1.17
LIG3-204ENST00000585740 LINC00269Q8N2A0 174 aa7.74□□□□□ -1.17
LIG3-204ENST00000585740 TRBV30A0A0K0K1B3 111 aa7.73□□□□□ -1.17
LIG3-204ENST00000585740 H3BMG7 143 aa7.73□□□□□ -1.17
LIG3-204ENST00000585740 EIF4EBP3O60516 100 aaPredicted RBP7.73□□□□□ -1.17
LIG3-204ENST00000585740 COX6CP09669 75 aa7.73□□□□□ -1.17
LIG3-204ENST00000585740 OCIAD2Q56VL3 154 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms