RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 IGKV3OR2-268A0A0C4DH90 116 aa9.49□□□□□ -0.89
UBBP4-202ENST00000584755 IGLV5-39A0A0G2JS06 123 aa9.49□□□□□ -0.89
UBBP4-202ENST00000584755 SS18Q15532 418 aa9.49□□□□□ -0.89
UBBP4-202ENST00000584755 UPK3BQ9BT76 320 aa9.49□□□□□ -0.89
UBBP4-202ENST00000584755 TTTY13Q9BZ97 58 aa9.49□□□□□ -0.89
UBBP4-202ENST00000584755 APLNQ9ULZ1 77 aa9.49□□□□□ -0.89
UBBP4-202ENST00000584755 NUPR2A6NF83 97 aa9.48□□□□□ -0.89
UBBP4-202ENST00000584755 SIVA1O15304 175 aa9.48□□□□□ -0.89
UBBP4-202ENST00000584755 SPINK8P0C7L1 97 aa9.48□□□□□ -0.89
UBBP4-202ENST00000584755 DNAH10OSP0CZ25 163 aa9.48□□□□□ -0.89
UBBP4-202ENST00000584755 CCL18P55774 89 aa9.48□□□□□ -0.89
UBBP4-202ENST00000584755 TSPEAR-AS2P59090 65 aa9.48□□□□□ -0.89
UBBP4-202ENST00000584755 C2orf91Q6ZV80 131 aa9.48□□□□□ -0.89
UBBP4-202ENST00000584755 MAPKAPK5-AS1Q8N8E1 139 aa9.48□□□□□ -0.89
UBBP4-202ENST00000584755 PLEKHB2Q96CS7 222 aa9.48□□□□□ -0.89
UBBP4-202ENST00000584755 TRAV8-3A0A0A6YYJ7 113 aa9.47□□□□□ -0.89
UBBP4-202ENST00000584755 SMIM1B2RUZ4 78 aa9.47□□□□□ -0.89
UBBP4-202ENST00000584755 J3QQQ9 107 aa9.47□□□□□ -0.89
UBBP4-202ENST00000584755 IGHV3-30-3P0DP02 117 aa9.47□□□□□ -0.89
UBBP4-202ENST00000584755 HNRNPA3P51991 378 aaKnown RBP9.47□□□□□ -0.89
UBBP4-202ENST00000584755 CLPSL2Q6UWE3 100 aa9.47□□□□□ -0.89
UBBP4-202ENST00000584755 KLK12Q9UKR0 248 aa9.47□□□□□ -0.89
UBBP4-202ENST00000584755 A0A087WZ39 114 aa9.47□□□□□ -0.89
UBBP4-202ENST00000584755 IGHV3-30P01768 117 aa9.47□□□□□ -0.89
UBBP4-202ENST00000584755 IGHV3-33P01772 117 aa9.47□□□□□ -0.89
UBBP4-202ENST00000584755 IGHV3-30-5P0DP03 117 aa9.47□□□□□ -0.89
UBBP4-202ENST00000584755 ENHOQ6UWT2 76 aa9.47□□□□□ -0.89
UBBP4-202ENST00000584755 MYMXA0A1B0GTQ4 84 aa9.46□□□□□ -0.9
UBBP4-202ENST00000584755 LINC01561Q8N1V8 128 aa9.46□□□□□ -0.9
UBBP4-202ENST00000584755 SVIPQ8NHG7 77 aa9.46□□□□□ -0.9
UBBP4-202ENST00000584755 HIGD1BQ9P298 99 aa9.46□□□□□ -0.9
UBBP4-202ENST00000584755 KLK5Q9Y337 293 aaPredicted RBP9.46□□□□□ -0.9
UBBP4-202ENST00000584755 PLECQ15149 4684 aaKnown RBP9.45□□□□□ -0.9
UBBP4-202ENST00000584755 IGHV3-64A0A075B6Q5 118 aa9.45□□□□□ -0.9
UBBP4-202ENST00000584755 A0A1B0GV90 55 aa9.45□□□□□ -0.9
UBBP4-202ENST00000584755 CD164L2Q6UWJ8 174 aa9.45□□□□□ -0.9
UBBP4-202ENST00000584755 CHCHD10Q8WYQ3 142 aaPredicted RBP9.45□□□□□ -0.9
UBBP4-202ENST00000584755 TRAV8-4A0A0B4J246 113 aa9.44□□□□□ -0.9
UBBP4-202ENST00000584755 ZNF815PA8K554 130 aa9.44□□□□□ -0.9
UBBP4-202ENST00000584755 LGALS3P17931 250 aaKnown RBP9.44□□□□□ -0.9
UBBP4-202ENST00000584755 XCL1P47992 114 aa9.44□□□□□ -0.9
UBBP4-202ENST00000584755 PCP4P48539 62 aa9.44□□□□□ -0.9
UBBP4-202ENST00000584755 MIAQ16674 131 aa9.43□□□□□ -0.9
UBBP4-202ENST00000584755 ZFAND6Q6FIF0 208 aa9.43□□□□□ -0.9
UBBP4-202ENST00000584755 UBE2WQ96B02 151 aa9.43□□□□□ -0.9
UBBP4-202ENST00000584755 CRPP02741 224 aa9.42□□□□□ -0.9
UBBP4-202ENST00000584755 FOXI1Q12951 378 aa9.42□□□□□ -0.9
UBBP4-202ENST00000584755 STARD9Q9P2P6 4700 aa9.42□□□□□ -0.9
UBBP4-202ENST00000584755 IGLV10-54A0A075B6I4 117 aa9.41□□□□□ -0.9
UBBP4-202ENST00000584755 C5orf38Q86SI9 138 aa9.41□□□□□ -0.9
UBBP4-202ENST00000584755 KRTAP26-1Q6PEX3 210 aa9.4□□□□□ -0.9
UBBP4-202ENST00000584755 NDUFA12Q9UI09 145 aa9.4□□□□□ -0.9
UBBP4-202ENST00000584755 DNAH1Q9P2D7 4330 aa9.4□□□□□ -0.9
UBBP4-202ENST00000584755 IBA57-AS1B1ANH7 110 aa9.4□□□□□ -0.91
UBBP4-202ENST00000584755 K7EP13 123 aa9.4□□□□□ -0.91
UBBP4-202ENST00000584755 COX7A2LO14548 114 aa9.4□□□□□ -0.91
UBBP4-202ENST00000584755 C10orf126Q8N4M7 172 aa9.4□□□□□ -0.91
UBBP4-202ENST00000584755 Q9H8V8 135 aa9.4□□□□□ -0.91
UBBP4-202ENST00000584755 GAGE12HA6NDE8 117 aa9.39□□□□□ -0.91
UBBP4-202ENST00000584755 NDUFA1O15239 70 aa9.39□□□□□ -0.91
UBBP4-202ENST00000584755 LYSTQ99698 3801 aa9.38□□□□□ -0.91
UBBP4-202ENST00000584755 HSD52Q0P140 79 aa9.38□□□□□ -0.91
UBBP4-202ENST00000584755 COX7B2Q8TF08 81 aa9.38□□□□□ -0.91
UBBP4-202ENST00000584755 ZNF625Q96I27 306 aaPredicted RBP9.38□□□□□ -0.91
UBBP4-202ENST00000584755 A0A0J9YXY3 114 aa9.37□□□□□ -0.91
UBBP4-202ENST00000584755 SCGB1D4Q6XE38 83 aa9.37□□□□□ -0.91
UBBP4-202ENST00000584755 SNHG12Q9BXW3 62 aa9.37□□□□□ -0.91
UBBP4-202ENST00000584755 M0R143 59 aa9.36□□□□□ -0.91
UBBP4-202ENST00000584755 TAL2Q16559 108 aa9.36□□□□□ -0.91
UBBP4-202ENST00000584755 Q8IZM0 81 aa9.36□□□□□ -0.91
UBBP4-202ENST00000584755 MUC7Q8TAX7 377 aa9.36□□□□□ -0.91
UBBP4-202ENST00000584755 SPANXB1Q9NS25 103 aaPredicted RBP9.36□□□□□ -0.91
UBBP4-202ENST00000584755 EREGO14944 169 aa9.35□□□□□ -0.91
UBBP4-202ENST00000584755 KIAA0087Q14695 138 aa9.35□□□□□ -0.91
UBBP4-202ENST00000584755 UBE2DNLQ8IWF7 75 aa9.35□□□□□ -0.91
UBBP4-202ENST00000584755 C1orf43Q9BWL3 253 aa9.35□□□□□ -0.91
UBBP4-202ENST00000584755 HERV-K104P63124 156 aa9.34□□□□□ -0.91
UBBP4-202ENST00000584755 BVES-AS1Q5T3Y7 98 aa9.34□□□□□ -0.91
UBBP4-202ENST00000584755 SFTA2Q6UW10 78 aa9.34□□□□□ -0.91
UBBP4-202ENST00000584755 LITAFQ99732 161 aa9.34□□□□□ -0.91
UBBP4-202ENST00000584755 VPS13DQ5THJ4 4388 aa9.34□□□□□ -0.91
UBBP4-202ENST00000584755 TIMM17BO60830 172 aa9.34□□□□□ -0.91
UBBP4-202ENST00000584755 APOMO95445 188 aa9.34□□□□□ -0.91
UBBP4-202ENST00000584755 MALP21145 153 aa9.34□□□□□ -0.91
UBBP4-202ENST00000584755 HINT1P49773 126 aaPredicted RBP9.34□□□□□ -0.91
UBBP4-202ENST00000584755 ORAOV1Q8WV07 137 aa9.34□□□□□ -0.91
UBBP4-202ENST00000584755 WWC2-AS2Q96NR7 200 aa9.34□□□□□ -0.91
UBBP4-202ENST00000584755 TOMM7Q9P0U1 55 aa9.34□□□□□ -0.91
UBBP4-202ENST00000584755 TENM2Q9NT68 2774 aa9.33□□□□□ -0.92
UBBP4-202ENST00000584755 TGP01266 2768 aa9.33□□□□□ -0.92
UBBP4-202ENST00000584755 TMEM238LA0A1B0GVL6 79 aa9.33□□□□□ -0.92
UBBP4-202ENST00000584755 TM2D2Q9BX73 214 aa9.33□□□□□ -0.92
UBBP4-202ENST00000584755 IGKV2D-24A0A075B6R9 120 aa9.32□□□□□ -0.92
UBBP4-202ENST00000584755 C6orf226Q5I0X4 101 aa9.32□□□□□ -0.92
UBBP4-202ENST00000584755 CEND1Q8N111 149 aa9.32□□□□□ -0.92
UBBP4-202ENST00000584755 HIST1H4GQ99525 98 aa9.32□□□□□ -0.92
UBBP4-202ENST00000584755 KRTAP1-5Q9BYS1 174 aa9.32□□□□□ -0.92
UBBP4-202ENST00000584755 TMEM238C9JI98 176 aa9.31□□□□□ -0.92
UBBP4-202ENST00000584755 PRSS2P07478 247 aa9.31□□□□□ -0.92
UBBP4-202ENST00000584755 CXCL5P42830 114 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms