RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 KIR2DL4Q99706 377 aa2.62□□□□□ -1.99
SMCHD1-208ENST00000583344 SPANXDQ9BXN6 97 aa2.62□□□□□ -1.99
SMCHD1-208ENST00000583344 TP53TG1Q9Y2A0 90 aa2.62□□□□□ -1.99
SMCHD1-208ENST00000583344 KALRNO60229 2985 aa2.62□□□□□ -1.99
SMCHD1-208ENST00000583344 LOC400499M0QZD8 3231 aa2.62□□□□□ -1.99
SMCHD1-208ENST00000583344 NAV3Q8IVL0 2385 aa2.61□□□□□ -1.99
SMCHD1-208ENST00000583344 USP9XQ93008 2570 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-208ENST00000583344 ANKRD17O75179 2603 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-208ENST00000583344 KNTC1P50748 2209 aa2.61□□□□□ -1.99
SMCHD1-208ENST00000583344 MYO9AB2RTY4 2548 aa2.61□□□□□ -1.99
SMCHD1-208ENST00000583344 TRBV10-2A0A0K0K1G8 114 aa2.61□□□□□ -1.99
SMCHD1-208ENST00000583344 M0QY20 66 aa2.61□□□□□ -1.99
SMCHD1-208ENST00000583344 LY6HO94772 140 aa2.61□□□□□ -1.99
SMCHD1-208ENST00000583344 IGHG2P01859 326 aa2.61□□□□□ -1.99
SMCHD1-208ENST00000583344 LGALS3P17931 250 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-208ENST00000583344 TSPEAR-AS2P59090 65 aa2.61□□□□□ -1.99
SMCHD1-208ENST00000583344 EGFEM1PQ0D2K5 195 aa2.61□□□□□ -1.99
SMCHD1-208ENST00000583344 ATXN8Q156A1 80 aa2.61□□□□□ -1.99
SMCHD1-208ENST00000583344 MUSTN1Q8IVN3 82 aa2.61□□□□□ -1.99
SMCHD1-208ENST00000583344 TMEM61Q8N0U2 210 aa2.61□□□□□ -1.99
SMCHD1-208ENST00000583344 C20orf203Q8NBC4 194 aa2.61□□□□□ -1.99
SMCHD1-208ENST00000583344 PTH2Q96A98 100 aa2.61□□□□□ -1.99
SMCHD1-208ENST00000583344 LAMA5O15230 3695 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 CADP27708 2225 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 IGHV3-49A0A0A0MS15 119 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 IGHV3-74A0A0B4J1X5 117 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 A0A0J9YXY3 114 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 FAM240AA0A1B0GVK7 77 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 A6NDX4 124 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 I3L3M4 83 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 TIMM17BO60830 172 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 MGPP08493 103 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 IFITM1P13164 125 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 ZNF22P17026 224 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 PFN2P35080 140 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 RPL39P62891 51 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 MRPS36P82909 103 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 TMEM170BQ5T4T1 132 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 UNQ9165/PRO28630Q6UXU0 137 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 LINC01006Q8NI28 216 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 DCANP1Q8TF63 244 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 FAM104AQ969W3 186 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 VSIG2Q96IQ7 327 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 RHPN1-AS1Q9BWJ2 59 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 SPANXCQ9NY87 97 aa2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 UBR5O95071 2799 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-208ENST00000583344 AHCTF1Q8WYP5 2266 aa2.59□□□□□ -1.99
SMCHD1-208ENST00000583344 UTP20O75691 2785 aaKnown RBP2.59□□□□□ -1.99
SMCHD1-208ENST00000583344 IGHV1-58A0A0C4DH39 117 aa2.59□□□□□ -1.99
SMCHD1-208ENST00000583344 TINCRA0A1B0GVN0 87 aa2.59□□□□□ -1.99
SMCHD1-208ENST00000583344 A8MTW9 85 aa2.59□□□□□ -1.99
SMCHD1-208ENST00000583344 C9JAW5 83 aa2.59□□□□□ -1.99
SMCHD1-208ENST00000583344 H3BT86 120 aa2.59□□□□□ -1.99
SMCHD1-208ENST00000583344 ACYP1P07311 99 aa2.59□□□□□ -1.99
SMCHD1-208ENST00000583344 COX6CP09669 75 aa2.59□□□□□ -1.99
SMCHD1-208ENST00000583344 RPL18AQ02543 176 aaKnown RBP2.59□□□□□ -1.99
SMCHD1-208ENST00000583344 UBE2E2Q96LR5 201 aa2.59□□□□□ -1.99
SMCHD1-208ENST00000583344 ANAPC13Q9BS18 74 aa2.59□□□□□ -1.99
SMCHD1-208ENST00000583344 IMUPQ9GZP8 106 aa2.59□□□□□ -1.99
SMCHD1-208ENST00000583344 DAZ1Q9NQZ3 744 aaKnown RBP2.59□□□□□ -1.99
SMCHD1-208ENST00000583344 APC2O95996 2303 aa2.58□□□□□ -2
SMCHD1-208ENST00000583344 PTPN13Q12923 2485 aa2.58□□□□□ -2
SMCHD1-208ENST00000583344 TRAV8-4A0A0B4J246 113 aa2.58□□□□□ -2
SMCHD1-208ENST00000583344 TRAV4A0A0B4J268 109 aa2.58□□□□□ -2
SMCHD1-208ENST00000583344 TRAV12-3A0A0B4J271 114 aa2.58□□□□□ -2
SMCHD1-208ENST00000583344 A0A0J9YXV3 536 aa2.58□□□□□ -2
SMCHD1-208ENST00000583344 SNCGO76070 127 aa2.58□□□□□ -2
SMCHD1-208ENST00000583344 TRBV12-3P01733 135 aa2.58□□□□□ -2
SMCHD1-208ENST00000583344 CHTF8P0CG12 524 aa2.58□□□□□ -2
SMCHD1-208ENST00000583344 IGHV3-30-3P0DP02 117 aa2.58□□□□□ -2
SMCHD1-208ENST00000583344 REG3AQ06141 175 aa2.58□□□□□ -2
SMCHD1-208ENST00000583344 TTC32Q5I0X7 151 aa2.58□□□□□ -2
SMCHD1-208ENST00000583344 SDIM1Q6ZPB5 146 aa2.58□□□□□ -2
SMCHD1-208ENST00000583344 FAM19A3Q7Z5A8 133 aa2.58□□□□□ -2
SMCHD1-208ENST00000583344 DNAJC30Q96LL9 226 aa2.58□□□□□ -2
SMCHD1-208ENST00000583344 LINC00467Q9BRT7 94 aa2.58□□□□□ -2
SMCHD1-208ENST00000583344 TIMM21Q9BVV7 248 aa2.58□□□□□ -2
SMCHD1-208ENST00000583344 URB1O60287 2271 aaKnown RBP2.58□□□□□ -2
SMCHD1-208ENST00000583344 SPENQ96T58 3664 aaKnown RBP2.57□□□□□ -2
SMCHD1-208ENST00000583344 TRAV2A0A0B4J234 112 aa2.57□□□□□ -2
SMCHD1-208ENST00000583344 TRBV7-7A0A0K0K1E9 115 aa2.57□□□□□ -2
SMCHD1-208ENST00000583344 H3BMM0 161 aa2.57□□□□□ -2
SMCHD1-208ENST00000583344 LST1O00453 97 aa2.57□□□□□ -2
SMCHD1-208ENST00000583344 EMP1P54849 157 aa2.57□□□□□ -2
SMCHD1-208ENST00000583344 DEFB1P60022 68 aa2.57□□□□□ -2
SMCHD1-208ENST00000583344 SNRPD3P62318 126 aaKnown RBP2.57□□□□□ -2
SMCHD1-208ENST00000583344 MIAQ16674 131 aa2.57□□□□□ -2
SMCHD1-208ENST00000583344 SFTA2Q6UW10 78 aa2.57□□□□□ -2
SMCHD1-208ENST00000583344 C15orf53Q8NAA6 179 aa2.57□□□□□ -2
SMCHD1-208ENST00000583344 UBE2WQ96B02 151 aa2.57□□□□□ -2
SMCHD1-208ENST00000583344 BPESC1Q9GZL8 116 aa2.57□□□□□ -2
SMCHD1-208ENST00000583344 ZNF702PQ9H963 129 aa2.57□□□□□ -2
SMCHD1-208ENST00000583344 LINC00527Q9UJ94 153 aa2.57□□□□□ -2
SMCHD1-208ENST00000583344 ICOSQ9Y6W8 199 aa2.57□□□□□ -2
SMCHD1-208ENST00000583344 ICE1Q9Y2F5 2266 aa2.57□□□□□ -2
SMCHD1-208ENST00000583344 ACACAQ13085 2346 aa2.57□□□□□ -2
SMCHD1-208ENST00000583344 MUC4Q99102 2169 aa2.56□□□□□ -2
SMCHD1-208ENST00000583344 TEX49A0A1B0GTD5 131 aa2.56□□□□□ -2
SMCHD1-208ENST00000583344 NDUFA1O15239 70 aa2.56□□□□□ -2
SMCHD1-208ENST00000583344 PSMB8P28062 276 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms