RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 ZC2HC1BQ5TFG8 222 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 CLPSL2Q6UWE3 100 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 C2orf66Q6UXQ4 117 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 FAM19A3Q7Z5A8 133 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 C15orf56Q8N910 161 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 OR5A1Q8NGJ0 315 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 UBE2WQ96B02 151 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 TOMM6Q96B49 74 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 AMELXQ99217 191 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 KIR2DL4Q99706 377 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 Q9HAA7 133 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 NXT2Q9NPJ8 142 aaKnown RBP2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 SPANXA1Q9NS26 97 aa2.47□□□□□ -2.01
SMARCE1-215ENST00000578995 TRAV9-2A0A087WT02 112 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 TRAV8-3A0A0A6YYJ7 113 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 IGHV3OR16-9A0A0B4J2B5 98 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 TMEM262E9PQX1 116 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 HIST1H2BKO60814 126 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 HIST1H2BJP06899 126 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 NPSP0C0P6 89 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 S100A1P23297 94 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 HIST1H2BOP23527 126 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 FCER1GP30273 86 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 HIST1H2BBP33778 126 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 FUSP35637 526 aaKnown RBP eCLIP2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 PTTG1IPP53801 180 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 HIST1H2BDP58876 126 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 HIST1H2BCP62807 126 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 Q0VG73 95 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 HIST2H2BEQ16778 126 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 ORMDL2Q53FV1 153 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 RNASE13Q5GAN3 156 aaKnown RBP2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 COA6Q5JTJ3 125 aaKnown RBP2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 NFE4Q86UQ8 179 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 ZNF664Q8N3J9 261 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 Q8N814 137 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 HIST1H2BHQ93079 126 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 TIMM17AQ99595 171 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 HIST1H2BNQ99877 126 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 HIST1H2BMQ99879 126 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 ABCA13Q86UQ4 5058 aa2.46□□□□□ -2.02
SMARCE1-215ENST00000578995 IGLV4-69A0A075B6H9 119 aa2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 IGLV10-54A0A075B6I4 117 aa2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 IGKV2D-30A0A075B6S6 120 aa2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 IGLV5-45A0A087WSX0 123 aa2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 GVQW2A0A096LPI5 108 aaPredicted RBP2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 TRAV8-4A0A0B4J246 113 aa2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 USP17L23D6RBM5 183 aa2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 UBE2L6O14933 153 aa2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 PRSS1P07477 247 aa2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 LINC00614P0C842 121 aa2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 UBE2D1P51668 147 aa2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 COX6A2Q02221 97 aa2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 PMCHL1Q16048 86 aa2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 LINC00242Q5T6M2 205 aa2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 Q6ZSA8 131 aa2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 ERASQ7Z444 233 aa2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 BAALCQ8WXS3 180 aa2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 CHCHD10Q8WYQ3 142 aaPredicted RBP2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 CYSLTR1Q9Y271 337 aa2.45□□□□□ -2.02
SMARCE1-215ENST00000578995 PCLOQ9Y6V0 5065 aa2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 IGKV2D-24A0A075B6R9 120 aa2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 LECT2O14960 151 aa2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 CCL25O15444 150 aa2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 SERF1AO75920 110 aa2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 HBDP02042 147 aa2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 CRPP02741 224 aa2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 KRTAP10-1P60331 282 aa2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 KIAA0087Q14695 138 aa2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 AMMECR1LQ6DCA0 310 aa2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 RNASEKQ6P5S7 137 aaKnown RBP2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 CD164L2Q6UWJ8 174 aa2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 SPATA12Q7Z6I5 190 aa2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 PRSS3P2Q8NHM4 247 aa2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 CHCHD1Q96BP2 118 aaKnown RBP2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 TMEM141Q96I45 108 aa2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 C1orf43Q9BWL3 253 aa2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 TM2D2Q9BX73 214 aa2.44□□□□□ -2.02
SMARCE1-215ENST00000578995 VPS13BQ7Z7G8 4022 aa2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 A0A087WZ39 114 aa2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 IGKV3OR2-268A0A0C4DH90 116 aa2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 IFITM10A6NMD0 228 aa2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 C1orf196B1AJZ1 125 aa2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 PANO1I0J062 215 aa2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 IGLC3P0DOY3 106 aa2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 XCL1P47992 114 aa2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 RAB5BP61020 215 aa2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 CNBPP62633 177 aaKnown RBP2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 CIRBPQ14011 172 aaKnown RBP2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 FA2HQ7L5A8 372 aa2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 FAM19A2Q8N3H0 131 aa2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 TMEM18Q96B42 140 aa2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 RMI2Q96E14 147 aa2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 TMEM101Q96IK0 257 aa2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 CST9LQ9H4G1 147 aa2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 FAM30AQ9NZY2 134 aa2.43□□□□□ -2.02
SMARCE1-215ENST00000578995 IGHV3-64A0A075B6Q5 118 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 TRAV13-1A0A0B4J241 112 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms