RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	OR13C6P	Q8NH95	151 aa		10.57	□□□□□ -0.72
PRPF8-216	ENST00000577001	LINC00158	P58513	81 aa		10.57	□□□□□ -0.72
PRPF8-216	ENST00000577001	RPL36A	P83881	106 aa	Known RBP	10.57	□□□□□ -0.72
PRPF8-216	ENST00000577001	MIA	Q16674	131 aa		10.57	□□□□□ -0.72
PRPF8-216	ENST00000577001	ZNF843	Q8N446	348 aa		10.57	□□□□□ -0.72
PRPF8-216	ENST00000577001	RPL36AL	Q969Q0	106 aa	Known RBP	10.57	□□□□□ -0.72
PRPF8-216	ENST00000577001	IGLV4-60	A0A075B6I1	120 aa		10.57	□□□□□ -0.72
PRPF8-216	ENST00000577001	UBE2W	Q96B02	151 aa		10.57	□□□□□ -0.72
PRPF8-216	ENST00000577001	LINC00526	Q96FQ7	95 aa		10.56	□□□□□ -0.72
PRPF8-216	ENST00000577001	F8	P00451	2351 aa		10.56	□□□□□ -0.72
PRPF8-216	ENST00000577001	COX6C	P09669	75 aa		10.56	□□□□□ -0.72
PRPF8-216	ENST00000577001	HTN3	P15516	51 aa		10.56	□□□□□ -0.72
PRPF8-216	ENST00000577001	LINC00482	Q8N8I6	264 aa		10.56	□□□□□ -0.72
PRPF8-216	ENST00000577001	SPATA3	Q8NHX4	192 aa		10.56	□□□□□ -0.72
PRPF8-216	ENST00000577001	SLPI	P03973	132 aa		10.55	□□□□□ -0.72
PRPF8-216	ENST00000577001	PRR3	P79522	188 aa	Known RBP	10.55	□□□□□ -0.72
PRPF8-216	ENST00000577001	ZFAND6	Q6FIF0	208 aa		10.55	□□□□□ -0.72
PRPF8-216	ENST00000577001	NOTCH1	P46531	2555 aa		10.55	□□□□□ -0.72
PRPF8-216	ENST00000577001	GAGE2B	Q13066	116 aa		10.55	□□□□□ -0.72
PRPF8-216	ENST00000577001	GAGE2E	Q4V326	116 aa		10.55	□□□□□ -0.72
PRPF8-216	ENST00000577001	LINC00308	Q8TCZ7	52 aa		10.55	□□□□□ -0.72
PRPF8-216	ENST00000577001	GAGE2D	Q9UEU5	116 aa		10.55	□□□□□ -0.72
PRPF8-216	ENST00000577001	XCL1	P47992	114 aa		10.55	□□□□□ -0.72
PRPF8-216	ENST00000577001	DSCR9	P59020	149 aa		10.55	□□□□□ -0.72
PRPF8-216	ENST00000577001	ODF3	Q96PU9	254 aa		10.55	□□□□□ -0.72
PRPF8-216	ENST00000577001	TINCR	A0A1B0GVN0	87 aa		10.54	□□□□□ -0.72
PRPF8-216	ENST00000577001	C4orf3	Q8WVX3	66 aa		10.54	□□□□□ -0.72
PRPF8-216	ENST00000577001		A0A0B4J2C4	111 aa		10.53	□□□□□ -0.72
PRPF8-216	ENST00000577001		K7EQD1	137 aa		10.53	□□□□□ -0.72
PRPF8-216	ENST00000577001	CIRBP	Q14011	172 aa	Known RBP	10.53	□□□□□ -0.72
PRPF8-216	ENST00000577001	MIR7-3HG	Q8N6C7	128 aa		10.53	□□□□□ -0.72
PRPF8-216	ENST00000577001	SMIM1	B2RUZ4	78 aa		10.52	□□□□□ -0.72
PRPF8-216	ENST00000577001	CCDC179	H3BU77	68 aa		10.52	□□□□□ -0.72
PRPF8-216	ENST00000577001	FAM218A	Q96MZ4	157 aa		10.52	□□□□□ -0.72
PRPF8-216	ENST00000577001	SPANXA1	Q9NS26	97 aa		10.52	□□□□□ -0.72
PRPF8-216	ENST00000577001	TRBV10-2	A0A0K0K1G8	114 aa		10.52	□□□□□ -0.73
PRPF8-216	ENST00000577001	NBEAL1	Q6ZS30	2694 aa		10.51	□□□□□ -0.73
PRPF8-216	ENST00000577001	DNAJC30	Q96LL9	226 aa		10.51	□□□□□ -0.73
PRPF8-216	ENST00000577001	PYGO1	Q9Y3Y4	419 aa		10.51	□□□□□ -0.73
PRPF8-216	ENST00000577001		J3QLI3	93 aa		10.5	□□□□□ -0.73
PRPF8-216	ENST00000577001	MAST4	O15021	2626 aa		10.5	□□□□□ -0.73
PRPF8-216	ENST00000577001	LINC01006	Q8NI28	216 aa		10.5	□□□□□ -0.73
PRPF8-216	ENST00000577001	PAX4	O43316	350 aa		10.49	□□□□□ -0.73
PRPF8-216	ENST00000577001	GIG44	P09565	113 aa	Predicted RBP	10.48	□□□□□ -0.73
PRPF8-216	ENST00000577001	ATP6V0E2	Q8NHE4	81 aa		10.48	□□□□□ -0.73
PRPF8-216	ENST00000577001	TMEM243	Q9BU79	118 aa		10.48	□□□□□ -0.73
PRPF8-216	ENST00000577001	STAB1	Q9NY15	2570 aa		10.48	□□□□□ -0.73
PRPF8-216	ENST00000577001	FBN1	P35555	2871 aa	Known RBP	10.48	□□□□□ -0.73
PRPF8-216	ENST00000577001	C9orf129	Q5T035	196 aa	Known RBP	10.48	□□□□□ -0.73
PRPF8-216	ENST00000577001	CDC42SE2	Q9NRR3	84 aa		10.48	□□□□□ -0.73
PRPF8-216	ENST00000577001	TRBV30	A0A0K0K1B3	111 aa		10.47	□□□□□ -0.73
PRPF8-216	ENST00000577001	GAGE2A	Q6NT46	116 aa		10.47	□□□□□ -0.73
PRPF8-216	ENST00000577001	C9orf116	Q5BN46	136 aa	Predicted RBP	10.47	□□□□□ -0.73
PRPF8-216	ENST00000577001	HERVK_113	P63121	156 aa		10.46	□□□□□ -0.73
PRPF8-216	ENST00000577001	BAALC-AS2	P0C853	105 aa		10.46	□□□□□ -0.74
PRPF8-216	ENST00000577001	FSHB	P01225	129 aa		10.45	□□□□□ -0.74
PRPF8-216	ENST00000577001	DAZ2	Q13117	558 aa	Known RBP	10.45	□□□□□ -0.74
PRPF8-216	ENST00000577001	DAZ4	Q86SG3	579 aa	Known RBP	10.45	□□□□□ -0.74
PRPF8-216	ENST00000577001	SBSPON	Q8IVN8	264 aa		10.45	□□□□□ -0.74
PRPF8-216	ENST00000577001	DAZ3	Q9NR90	486 aa	Known RBP	10.45	□□□□□ -0.74
PRPF8-216	ENST00000577001	NDUFA1	O15239	70 aa		10.45	□□□□□ -0.74
PRPF8-216	ENST00000577001	KRTAP1-3	Q8IUG1	177 aa		10.45	□□□□□ -0.74
PRPF8-216	ENST00000577001	LST1	O00453	97 aa		10.44	□□□□□ -0.74
PRPF8-216	ENST00000577001	GYPE	P15421	78 aa		10.44	□□□□□ -0.74
PRPF8-216	ENST00000577001	LINC00337	Q8N6G1	96 aa		10.44	□□□□□ -0.74
PRPF8-216	ENST00000577001	SPANXD	Q9BXN6	97 aa		10.44	□□□□□ -0.74
PRPF8-216	ENST00000577001	SND1-IT1	Q9HBX3	110 aa		10.44	□□□□□ -0.74
PRPF8-216	ENST00000577001	SPANXC	Q9NY87	97 aa		10.44	□□□□□ -0.74
PRPF8-216	ENST00000577001	NHLRC4	P0CG21	123 aa	Predicted RBP	10.43	□□□□□ -0.74
PRPF8-216	ENST00000577001	PF4	P02776	101 aa		10.43	□□□□□ -0.74
PRPF8-216	ENST00000577001	BEAN1	Q3B7T3	259 aa		10.43	□□□□□ -0.74
PRPF8-216	ENST00000577001	C6orf226	Q5I0X4	101 aa		10.43	□□□□□ -0.74
PRPF8-216	ENST00000577001		A0A087WYN8	130 aa		10.43	□□□□□ -0.74
PRPF8-216	ENST00000577001		A8MTW9	85 aa		10.43	□□□□□ -0.74
PRPF8-216	ENST00000577001	NDUFV3	P56181	108 aa	Known RBP	10.42	□□□□□ -0.74
PRPF8-216	ENST00000577001	DEFB135	Q30KP9	77 aa		10.42	□□□□□ -0.74
PRPF8-216	ENST00000577001	C14orf132	Q9NPU4	83 aa		10.42	□□□□□ -0.74
PRPF8-216	ENST00000577001	SCGB1A1	P11684	91 aa		10.41	□□□□□ -0.74
PRPF8-216	ENST00000577001	COX7B2	Q8TF08	81 aa		10.41	□□□□□ -0.74
PRPF8-216	ENST00000577001	BAHCC1	Q9P281	2608 aa		10.41	□□□□□ -0.74
PRPF8-216	ENST00000577001	IGKV3D-7	A0A0C4DH55	119 aa		10.41	□□□□□ -0.74
PRPF8-216	ENST00000577001	CRP	P02741	224 aa		10.4	□□□□□ -0.74
PRPF8-216	ENST00000577001		F5H768	121 aa		10.4	□□□□□ -0.74
PRPF8-216	ENST00000577001	PLAC8L1	A1L4L8	177 aa		10.39	□□□□□ -0.75
PRPF8-216	ENST00000577001	LECT2	O14960	151 aa		10.39	□□□□□ -0.75
PRPF8-216	ENST00000577001	IFITM1	P13164	125 aa		10.39	□□□□□ -0.75
PRPF8-216	ENST00000577001	RNF152	Q8N8N0	203 aa		10.39	□□□□□ -0.75
PRPF8-216	ENST00000577001	NCR3	O14931	201 aa		10.39	□□□□□ -0.75
PRPF8-216	ENST00000577001	TIRAP	P58753	221 aa		10.39	□□□□□ -0.75
PRPF8-216	ENST00000577001	SMCR5	Q8TEV8	140 aa		10.39	□□□□□ -0.75
PRPF8-216	ENST00000577001	COL6A5	A8TX70	2615 aa		10.38	□□□□□ -0.75
PRPF8-216	ENST00000577001	FAM236A	A0A1B0GUQ0	79 aa		10.38	□□□□□ -0.75
PRPF8-216	ENST00000577001	FAM236B	A0A1B0GV22	79 aa		10.38	□□□□□ -0.75
PRPF8-216	ENST00000577001	CCL18	P55774	89 aa		10.38	□□□□□ -0.75
PRPF8-216	ENST00000577001	CITED1	Q99966	193 aa		10.38	□□□□□ -0.75
PRPF8-216	ENST00000577001	SMIM11B	Q8TCY0	68 aa		10.38	□□□□□ -0.75
PRPF8-216	ENST00000577001	IGKV2-28	A0A075B6P5	120 aa		10.37	□□□□□ -0.75
PRPF8-216	ENST00000577001	IGLV5-39	A0A0G2JS06	123 aa		10.37	□□□□□ -0.75
PRPF8-216	ENST00000577001	IGKV2D-28	P01615	120 aa		10.37	□□□□□ -0.75
PRPF8-216	ENST00000577001	FHL2	Q14192	279 aa		10.37	□□□□□ -0.75

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