RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 IGKV2D-24A0A075B6R9 120 aa13.05□□□□□ -0.32
ATPAF1-214ENST00000576409 Q6ZSN1 163 aa13.04□□□□□ -0.32
ATPAF1-214ENST00000576409 C20orf197Q8N268 126 aa13.04□□□□□ -0.32
ATPAF1-214ENST00000576409 COX6A2Q02221 97 aa13.04□□□□□ -0.32
ATPAF1-214ENST00000576409 C4orf3Q8WVX3 66 aa13.04□□□□□ -0.32
ATPAF1-214ENST00000576409 LINC00694P0DN24 101 aa13.03□□□□□ -0.32
ATPAF1-214ENST00000576409 SCXQ7RTU7 201 aa13.03□□□□□ -0.32
ATPAF1-214ENST00000576409 TIRAPP58753 221 aa13.03□□□□□ -0.32
ATPAF1-214ENST00000576409 SPAG11BQ08648 103 aa13.03□□□□□ -0.32
ATPAF1-214ENST00000576409 LINC00242Q5T6M2 205 aa13.03□□□□□ -0.32
ATPAF1-214ENST00000576409 CHD6Q8TD26 2715 aa13.03□□□□□ -0.32
ATPAF1-214ENST00000576409 TMEM89A2RUT3 159 aa13.02□□□□□ -0.32
ATPAF1-214ENST00000576409 CAMK2N2Q96S95 79 aa13.02□□□□□ -0.32
ATPAF1-214ENST00000576409 ATRQ13535 2644 aa13.02□□□□□ -0.33
ATPAF1-214ENST00000576409 XAGE1AQ9HD64 81 aa13.02□□□□□ -0.33
ATPAF1-214ENST00000576409 DNAJC9-AS1A6NH13 148 aa13□□□□□ -0.33
ATPAF1-214ENST00000576409 Q6YL49 198 aa13□□□□□ -0.33
ATPAF1-214ENST00000576409 WFDC9Q8NEX5 89 aa13□□□□□ -0.33
ATPAF1-214ENST00000576409 HECTD1Q9ULT8 2610 aa13□□□□□ -0.33
ATPAF1-214ENST00000576409 SPANXDQ9BXN6 97 aa12.99□□□□□ -0.33
ATPAF1-214ENST00000576409 KIF25-AS1Q9Y6Z4 181 aa12.99□□□□□ -0.33
ATPAF1-214ENST00000576409 USP34Q70CQ2 3546 aa12.99□□□□□ -0.33
ATPAF1-214ENST00000576409 J3KT08 172 aa12.99□□□□□ -0.33
ATPAF1-214ENST00000576409 MRAPQ8TCY5 172 aa12.99□□□□□ -0.33
ATPAF1-214ENST00000576409 PRO0461Q9UI25 63 aa12.99□□□□□ -0.33
ATPAF1-214ENST00000576409 LINC00482Q8N8I6 264 aa12.99□□□□□ -0.33
ATPAF1-214ENST00000576409 UQCRQO14949 82 aa12.98□□□□□ -0.33
ATPAF1-214ENST00000576409 HIGD2BQ4VC39 106 aa12.98□□□□□ -0.33
ATPAF1-214ENST00000576409 C6orf99Q4VX62 202 aa12.98□□□□□ -0.33
ATPAF1-214ENST00000576409 ENHOQ6UWT2 76 aa12.98□□□□□ -0.33
ATPAF1-214ENST00000576409 SMIM11BQ8TCY0 68 aa12.98□□□□□ -0.33
ATPAF1-214ENST00000576409 ZNF702PQ9H963 129 aa12.98□□□□□ -0.33
ATPAF1-214ENST00000576409 PRO0255Q9UI72 69 aa12.98□□□□□ -0.33
ATPAF1-214ENST00000576409 FAM222AQ5U5X8 452 aa12.97□□□□□ -0.33
ATPAF1-214ENST00000576409 IGHV4-31P0DP07 118 aa12.97□□□□□ -0.33
ATPAF1-214ENST00000576409 APOC4P55056 127 aa12.97□□□□□ -0.33
ATPAF1-214ENST00000576409 ZNF292O60281 2723 aa12.97□□□□□ -0.33
ATPAF1-214ENST00000576409 A0A087WVE0 104 aa12.97□□□□□ -0.33
ATPAF1-214ENST00000576409 JMJD7-PLA2G4BH0Y9G9 81 aa12.97□□□□□ -0.33
ATPAF1-214ENST00000576409 LINC00315P59091 139 aa12.97□□□□□ -0.33
ATPAF1-214ENST00000576409 TACC2O95359 2948 aa12.97□□□□□ -0.33
ATPAF1-214ENST00000576409 TRBV6-8A0A0A6YYG3 113 aa12.96□□□□□ -0.33
ATPAF1-214ENST00000576409 PRR3P79522 188 aaKnown RBP12.96□□□□□ -0.33
ATPAF1-214ENST00000576409 F8WEM9 126 aa12.96□□□□□ -0.33
ATPAF1-214ENST00000576409 COL4A2P08572 1712 aa12.96□□□□□ -0.33
ATPAF1-214ENST00000576409 PLA2G2AP14555 144 aa12.95□□□□□ -0.34
ATPAF1-214ENST00000576409 CHCHD7Q9BUK0 85 aa12.95□□□□□ -0.34
ATPAF1-214ENST00000576409 REV3LO60673 3130 aa12.95□□□□□ -0.34
ATPAF1-214ENST00000576409 DMXL2Q8TDJ6 3036 aa12.95□□□□□ -0.34
ATPAF1-214ENST00000576409 TMEM256-PLSCR3K7ERE1 68 aa12.94□□□□□ -0.34
ATPAF1-214ENST00000576409 C3orf22Q8N5N4 141 aa12.94□□□□□ -0.34
ATPAF1-214ENST00000576409 PSCAO43653 123 aa12.94□□□□□ -0.34
ATPAF1-214ENST00000576409 SMIM1B2RUZ4 78 aa12.94□□□□□ -0.34
ATPAF1-214ENST00000576409 CCL18P55774 89 aa12.94□□□□□ -0.34
ATPAF1-214ENST00000576409 ODF3L2Q3SX64 289 aa12.93□□□□□ -0.34
ATPAF1-214ENST00000576409 KLK5Q9Y337 293 aaPredicted RBP12.93□□□□□ -0.34
ATPAF1-214ENST00000576409 MGAM2Q2M2H8 2515 aa12.93□□□□□ -0.34
ATPAF1-214ENST00000576409 CHCHD10Q8WYQ3 142 aaPredicted RBP12.93□□□□□ -0.34
ATPAF1-214ENST00000576409 CDC42SE2Q9NRR3 84 aa12.93□□□□□ -0.34
ATPAF1-214ENST00000576409 BBC3Q96PG8 261 aaPredicted RBP12.93□□□□□ -0.34
ATPAF1-214ENST00000576409 C1orf43Q9BWL3 253 aa12.92□□□□□ -0.34
ATPAF1-214ENST00000576409 REG3AQ06141 175 aa12.92□□□□□ -0.34
ATPAF1-214ENST00000576409 UPK3BQ9BT76 320 aa12.92□□□□□ -0.34
ATPAF1-214ENST00000576409 SPART-AS1P0CW21 52 aa12.91□□□□□ -0.34
ATPAF1-214ENST00000576409 IBA57-AS1B1ANH7 110 aa12.91□□□□□ -0.34
ATPAF1-214ENST00000576409 USP17L23D6RBM5 183 aa12.9□□□□□ -0.34
ATPAF1-214ENST00000576409 TIMM17BO60830 172 aa12.9□□□□□ -0.34
ATPAF1-214ENST00000576409 NREPQ16612 68 aa12.9□□□□□ -0.34
ATPAF1-214ENST00000576409 AMELXQ99217 191 aa12.9□□□□□ -0.34
ATPAF1-214ENST00000576409 CXCL5P42830 114 aa12.9□□□□□ -0.34
ATPAF1-214ENST00000576409 IGLV4-60A0A075B6I1 120 aa12.89□□□□□ -0.35
ATPAF1-214ENST00000576409 KRTAP10-9P60411 292 aa12.89□□□□□ -0.35
ATPAF1-214ENST00000576409 C9orf116Q5BN46 136 aaPredicted RBP12.89□□□□□ -0.35
ATPAF1-214ENST00000576409 UBE2BP63146 152 aa12.88□□□□□ -0.35
ATPAF1-214ENST00000576409 DIRC1Q969H9 104 aa12.88□□□□□ -0.35
ATPAF1-214ENST00000576409 Q8N2B8 174 aa12.88□□□□□ -0.35
ATPAF1-214ENST00000576409 UBE2DNLQ8IWF7 75 aa12.87□□□□□ -0.35
ATPAF1-214ENST00000576409 SPTBN5Q9NRC6 3674 aaKnown RBP12.86□□□□□ -0.35
ATPAF1-214ENST00000576409 ATMQ13315 3056 aa12.86□□□□□ -0.35
ATPAF1-214ENST00000576409 C1orf158Q8N1D5 194 aa12.86□□□□□ -0.35
ATPAF1-214ENST00000576409 ZZEF1O43149 2961 aa12.86□□□□□ -0.35
ATPAF1-214ENST00000576409 A0A087WYN8 130 aa12.86□□□□□ -0.35
ATPAF1-214ENST00000576409 Q6ZQY7 126 aa12.86□□□□□ -0.35
ATPAF1-214ENST00000576409 LINC00959A0A1B0GUT2 108 aa12.85□□□□□ -0.35
ATPAF1-214ENST00000576409 MAST4O15021 2626 aa12.85□□□□□ -0.35
ATPAF1-214ENST00000576409 TRBV6-4A0A1B0GX49 114 aa12.85□□□□□ -0.35
ATPAF1-214ENST00000576409 LINC01546A6NGU7 62 aa12.85□□□□□ -0.35
ATPAF1-214ENST00000576409 PRORYQ9H606 182 aa12.85□□□□□ -0.35
ATPAF1-214ENST00000576409 FLNAP21333 2647 aaKnown RBP12.85□□□□□ -0.35
ATPAF1-214ENST00000576409 SNURFQ9Y675 71 aa12.84□□□□□ -0.35
ATPAF1-214ENST00000576409 ETDCA0A1B0GVM5 59 aa12.83□□□□□ -0.36
ATPAF1-214ENST00000576409 SHISA2Q6UWI4 295 aa12.83□□□□□ -0.36
ATPAF1-214ENST00000576409 LOC400499M0QZD8 3231 aa12.82□□□□□ -0.36
ATPAF1-214ENST00000576409 COX7CP15954 63 aa12.82□□□□□ -0.36
ATPAF1-214ENST00000576409 CFAP46Q8IYW2 2715 aa12.82□□□□□ -0.36
ATPAF1-214ENST00000576409 LINC01006Q8NI28 216 aa12.81□□□□□ -0.36
ATPAF1-214ENST00000576409 FUSP35637 526 aaKnown RBP eCLIP12.81□□□□□ -0.36
ATPAF1-214ENST00000576409 A8MTW9 85 aa12.8□□□□□ -0.36
ATPAF1-214ENST00000576409 C9orf66Q5T8R8 295 aa12.8□□□□□ -0.36
ATPAF1-214ENST00000576409 LRRC75A-AS1Q8N1F1 130 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms