RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 ACYP1P07311 99 aa3.04□□□□□ -1.92
TSR1-203ENST00000575049 POLR2KP53803 58 aaKnown RBP3.04□□□□□ -1.92
TSR1-203ENST00000575049 SFTA2Q6UW10 78 aa3.04□□□□□ -1.92
TSR1-203ENST00000575049 IGFL3Q6UXB1 125 aa3.04□□□□□ -1.92
TSR1-203ENST00000575049 C1orf64Q8NEQ6 169 aa3.04□□□□□ -1.92
TSR1-203ENST00000575049 KNL1Q8NG31 2342 aa3.04□□□□□ -1.92
TSR1-203ENST00000575049 ASCC3Q8N3C0 2202 aaKnown RBP3.03□□□□□ -1.92
TSR1-203ENST00000575049 TRAV2A0A0B4J234 112 aa3.03□□□□□ -1.92
TSR1-203ENST00000575049 TRAV13-1A0A0B4J241 112 aa3.03□□□□□ -1.92
TSR1-203ENST00000575049 M0R1W7 72 aa3.03□□□□□ -1.92
TSR1-203ENST00000575049 LINC00315P59091 139 aa3.03□□□□□ -1.92
TSR1-203ENST00000575049 HES1Q14469 280 aa3.03□□□□□ -1.92
TSR1-203ENST00000575049 RHOHQ15669 191 aa3.03□□□□□ -1.92
TSR1-203ENST00000575049 MEIG1Q5JSS6 88 aa3.03□□□□□ -1.92
TSR1-203ENST00000575049 TMEM170BQ5T4T1 132 aa3.03□□□□□ -1.92
TSR1-203ENST00000575049 MUSTN1Q8IVN3 82 aa3.03□□□□□ -1.92
TSR1-203ENST00000575049 RNF182Q8N6D2 247 aa3.03□□□□□ -1.92
TSR1-203ENST00000575049 RPL39LQ96EH5 51 aaKnown RBP3.03□□□□□ -1.92
TSR1-203ENST00000575049 DYNLRB1Q9NP97 96 aa3.03□□□□□ -1.92
TSR1-203ENST00000575049 S4R3C0 116 aa3.03□□□□□ -1.92
TSR1-203ENST00000575049 AGRNO00468 2067 aa3.03□□□□□ -1.92
TSR1-203ENST00000575049 TRANK1O15050 2925 aa3.02□□□□□ -1.93
TSR1-203ENST00000575049 TRBV7-1A0A0A6YYK4 115 aa3.02□□□□□ -1.93
TSR1-203ENST00000575049 TRBV27A0A0K0K1C4 114 aa3.02□□□□□ -1.93
TSR1-203ENST00000575049 E7EQL1 145 aa3.02□□□□□ -1.93
TSR1-203ENST00000575049 NPFFO15130 113 aa3.02□□□□□ -1.93
TSR1-203ENST00000575049 ZNF22P17026 224 aaPredicted RBP3.02□□□□□ -1.93
TSR1-203ENST00000575049 RPL28P46779 137 aaKnown RBP3.02□□□□□ -1.93
TSR1-203ENST00000575049 PRR9Q5T870 116 aa3.02□□□□□ -1.93
TSR1-203ENST00000575049 MINOS1Q5TGZ0 78 aa3.02□□□□□ -1.93
TSR1-203ENST00000575049 C2orf82Q6UX34 121 aa3.02□□□□□ -1.93
TSR1-203ENST00000575049 MINOS1-NBL1R4GNA1 71 aa3.02□□□□□ -1.93
TSR1-203ENST00000575049 CACNA1AO00555 2505 aa3.02□□□□□ -1.93
TSR1-203ENST00000575049 BRWD1Q9NSI6 2320 aa3.02□□□□□ -1.93
TSR1-203ENST00000575049 TANC2Q9HCD6 1990 aa3.01□□□□□ -1.93
TSR1-203ENST00000575049 TEX49A0A1B0GTD5 131 aa3.01□□□□□ -1.93
TSR1-203ENST00000575049 TIMM17BO60830 172 aa3.01□□□□□ -1.93
TSR1-203ENST00000575049 MSMBP08118 114 aa3.01□□□□□ -1.93
TSR1-203ENST00000575049 MGPP08493 103 aa3.01□□□□□ -1.93
TSR1-203ENST00000575049 COX6CP09669 75 aa3.01□□□□□ -1.93
TSR1-203ENST00000575049 DNAH10OSP0CZ25 163 aa3.01□□□□□ -1.93
TSR1-203ENST00000575049 RNASE3P12724 160 aaKnown RBP3.01□□□□□ -1.93
TSR1-203ENST00000575049 LINC00483Q53H64 154 aa3.01□□□□□ -1.93
TSR1-203ENST00000575049 SOSTDC1Q6X4U4 206 aa3.01□□□□□ -1.93
TSR1-203ENST00000575049 LINC00643Q86TS7 51 aa3.01□□□□□ -1.93
TSR1-203ENST00000575049 C3orf56Q8N813 242 aa3.01□□□□□ -1.93
TSR1-203ENST00000575049 Q8NAQ8 132 aa3.01□□□□□ -1.93
TSR1-203ENST00000575049 Q8NDZ9 215 aa3.01□□□□□ -1.93
TSR1-203ENST00000575049 PRR34Q9NV39 138 aa3.01□□□□□ -1.93
TSR1-203ENST00000575049 PRR14LQ5THK1 2151 aa3.01□□□□□ -1.93
TSR1-203ENST00000575049 PI4KAP42356 2102 aa3.01□□□□□ -1.93
TSR1-203ENST00000575049 CACNA1EQ15878 2313 aa3.01□□□□□ -1.93
TSR1-203ENST00000575049 CABIN1Q9Y6J0 2220 aa3□□□□□ -1.93
TSR1-203ENST00000575049 A0A1B0GU33 70 aa3□□□□□ -1.93
TSR1-203ENST00000575049 UQCRQO14949 82 aa3□□□□□ -1.93
TSR1-203ENST00000575049 PRB3Q04118 309 aaPredicted RBP3□□□□□ -1.93
TSR1-203ENST00000575049 ZNF56Q15929 161 aa3□□□□□ -1.93
TSR1-203ENST00000575049 DEFB109BQ30KR1 87 aa3□□□□□ -1.93
TSR1-203ENST00000575049 LINC00526Q96FQ7 95 aa3□□□□□ -1.93
TSR1-203ENST00000575049 DIDO1Q9BTC0 2240 aaKnown RBP3□□□□□ -1.93
TSR1-203ENST00000575049 CACNA1DQ01668 2161 aa3□□□□□ -1.93
TSR1-203ENST00000575049 DOCK10Q96BY6 2186 aa3□□□□□ -1.93
TSR1-203ENST00000575049 ZNF318Q5VUA4 2279 aa2.99□□□□□ -1.93
TSR1-203ENST00000575049 TNCP24821 2201 aa2.99□□□□□ -1.93
TSR1-203ENST00000575049 IGHV3OR16-8A0A075B7F1 116 aa2.99□□□□□ -1.93
TSR1-203ENST00000575049 FAM223BA6NKX1 122 aa2.99□□□□□ -1.93
TSR1-203ENST00000575049 H3BPC8 53 aa2.99□□□□□ -1.93
TSR1-203ENST00000575049 H7C2G1 150 aa2.99□□□□□ -1.93
TSR1-203ENST00000575049 GNRH2O43555 120 aa2.99□□□□□ -1.93
TSR1-203ENST00000575049 RPL39P62891 51 aaKnown RBP2.99□□□□□ -1.93
TSR1-203ENST00000575049 MRPS36P82909 103 aaKnown RBP2.99□□□□□ -1.93
TSR1-203ENST00000575049 KPRPQ5T749 579 aaPredicted RBP2.99□□□□□ -1.93
TSR1-203ENST00000575049 C7orf65Q6ZTY9 151 aa2.99□□□□□ -1.93
TSR1-203ENST00000575049 VMO1Q7Z5L0 202 aa2.99□□□□□ -1.93
TSR1-203ENST00000575049 C5orf38Q86SI9 138 aa2.99□□□□□ -1.93
TSR1-203ENST00000575049 FAM223AQ8IWN6 122 aa2.99□□□□□ -1.93
TSR1-203ENST00000575049 KIAA0100Q14667 2235 aaKnown RBP2.99□□□□□ -1.93
TSR1-203ENST00000575049 UNC79Q9P2D8 2635 aa2.98□□□□□ -1.93
TSR1-203ENST00000575049 FAM236AA0A1B0GUQ0 79 aa2.98□□□□□ -1.93
TSR1-203ENST00000575049 FAM236BA0A1B0GV22 79 aa2.98□□□□□ -1.93
TSR1-203ENST00000575049 LYNX1G3V0Z9 82 aa2.98□□□□□ -1.93
TSR1-203ENST00000575049 I3L3M4 83 aa2.98□□□□□ -1.93
TSR1-203ENST00000575049 M0QY20 66 aa2.98□□□□□ -1.93
TSR1-203ENST00000575049 NDUFA4O00483 81 aa2.98□□□□□ -1.93
TSR1-203ENST00000575049 TRACP01848 142 aa2.98□□□□□ -1.93
TSR1-203ENST00000575049 LYNX1P0DP58 116 aa2.98□□□□□ -1.93
TSR1-203ENST00000575049 CRYGAP11844 174 aa2.98□□□□□ -1.93
TSR1-203ENST00000575049 C9orf153Q5TBE3 101 aa2.98□□□□□ -1.93
TSR1-203ENST00000575049 TIMM21Q9BVV7 248 aa2.98□□□□□ -1.93
TSR1-203ENST00000575049 PRO3102Q9H379 93 aa2.98□□□□□ -1.93
TSR1-203ENST00000575049 MYO9BQ13459 2157 aa2.98□□□□□ -1.93
TSR1-203ENST00000575049 TRAV7A0A075B6U4 112 aa2.97□□□□□ -1.93
TSR1-203ENST00000575049 COX7CP15954 63 aa2.97□□□□□ -1.93
TSR1-203ENST00000575049 NDUFA12Q9UI09 145 aa2.97□□□□□ -1.93
TSR1-203ENST00000575049 C5orf42Q9H799 3197 aa2.97□□□□□ -1.93
TSR1-203ENST00000575049 UNC80Q8N2C7 3258 aa2.97□□□□□ -1.93
TSR1-203ENST00000575049 H3BUA1 57 aa2.96□□□□□ -1.94
TSR1-203ENST00000575049 ATOX1O00244 68 aa2.96□□□□□ -1.94
TSR1-203ENST00000575049 NDUFA1O15239 70 aa2.96□□□□□ -1.94
TSR1-203ENST00000575049 KRTAP25-1Q3LHN0 102 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms