RNA–Protein interactions for RNA: ENST00000570989.1

ITGA3-216, Transcript of integrin subunit alpha 3, humanhuman

Gene ITGA3, Length 2,495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-216ENST00000570989 COX6A2Q02221 97 aa10.46□□□□□ -0.74
ITGA3-216ENST00000570989 C22orf24Q9Y442 160 aa10.46□□□□□ -0.74
ITGA3-216ENST00000570989 IGHV3-38A0A0C4DH36 116 aa10.45□□□□□ -0.74
ITGA3-216ENST00000570989 TIRAPP58753 221 aa10.45□□□□□ -0.74
ITGA3-216ENST00000570989 BEAN1Q3B7T3 259 aa10.45□□□□□ -0.74
ITGA3-216ENST00000570989 IGLV5-39A0A0G2JS06 123 aa10.45□□□□□ -0.74
ITGA3-216ENST00000570989 SYNJ2BPP57105 145 aa10.44□□□□□ -0.74
ITGA3-216ENST00000570989 SDIM1Q6ZPB5 146 aa10.44□□□□□ -0.74
ITGA3-216ENST00000570989 Q9H8V8 135 aa10.44□□□□□ -0.74
ITGA3-216ENST00000570989 ZNF702PQ9H963 129 aa10.44□□□□□ -0.74
ITGA3-216ENST00000570989 MTORP42345 2549 aa10.44□□□□□ -0.74
ITGA3-216ENST00000570989 RBMY1BA6NDE4 496 aaKnown RBP10.44□□□□□ -0.74
ITGA3-216ENST00000570989 RBMY1EA6NEQ0 496 aaKnown RBP10.44□□□□□ -0.74
ITGA3-216ENST00000570989 RBMY1DP0C7P1 496 aaKnown RBP10.44□□□□□ -0.74
ITGA3-216ENST00000570989 TMEM89A2RUT3 159 aa10.43□□□□□ -0.74
ITGA3-216ENST00000570989 SONP18583 2426 aaKnown RBP10.43□□□□□ -0.74
ITGA3-216ENST00000570989 IGHV3OR16-12A0A075B7B8 117 aa10.43□□□□□ -0.74
ITGA3-216ENST00000570989 ZNF625Q96I27 306 aaPredicted RBP10.43□□□□□ -0.74
ITGA3-216ENST00000570989 A0A0U1RRA0 63 aa10.42□□□□□ -0.74
ITGA3-216ENST00000570989 DAZ2Q13117 558 aaKnown RBP10.42□□□□□ -0.74
ITGA3-216ENST00000570989 CIRBPQ14011 172 aaKnown RBP10.42□□□□□ -0.74
ITGA3-216ENST00000570989 DAZ4Q86SG3 579 aaKnown RBP10.42□□□□□ -0.74
ITGA3-216ENST00000570989 LINC00643Q86TS7 51 aa10.42□□□□□ -0.74
ITGA3-216ENST00000570989 DAZ3Q9NR90 486 aaKnown RBP10.42□□□□□ -0.74
ITGA3-216ENST00000570989 LINC00242Q5T6M2 205 aa10.41□□□□□ -0.74
ITGA3-216ENST00000570989 FAM218AQ96MZ4 157 aa10.41□□□□□ -0.74
ITGA3-216ENST00000570989 A8MTW9 85 aa10.41□□□□□ -0.74
ITGA3-216ENST00000570989 IGHV3-53P01767 116 aa10.41□□□□□ -0.74
ITGA3-216ENST00000570989 CRYGAP11844 174 aa10.41□□□□□ -0.74
ITGA3-216ENST00000570989 COX7CP15954 63 aa10.41□□□□□ -0.74
ITGA3-216ENST00000570989 PIK3CD-AS1Q5SR53 167 aa10.41□□□□□ -0.74
ITGA3-216ENST00000570989 NIPBLQ6KC79 2804 aaeCLIP10.4□□□□□ -0.74
ITGA3-216ENST00000570989 KLK5Q9Y337 293 aaPredicted RBP10.4□□□□□ -0.74
ITGA3-216ENST00000570989 ANK3Q12955 4377 aaKnown RBP10.4□□□□□ -0.74
ITGA3-216ENST00000570989 TRACP01848 142 aa10.4□□□□□ -0.75
ITGA3-216ENST00000570989 GAGE2AQ6NT46 116 aa10.4□□□□□ -0.75
ITGA3-216ENST00000570989 SMIM1B2RUZ4 78 aa10.39□□□□□ -0.75
ITGA3-216ENST00000570989 C11orf72Q8NBR9 251 aa10.39□□□□□ -0.75
ITGA3-216ENST00000570989 CUBNO60494 3623 aa10.39□□□□□ -0.75
ITGA3-216ENST00000570989 BAALC-AS2P0C853 105 aa10.39□□□□□ -0.75
ITGA3-216ENST00000570989 ZNF415Q09FC8 603 aa10.39□□□□□ -0.75
ITGA3-216ENST00000570989 DEFB131AP59861 70 aa10.38□□□□□ -0.75
ITGA3-216ENST00000570989 HOXD3P31249 432 aaPredicted RBP10.38□□□□□ -0.75
ITGA3-216ENST00000570989 CXCL5P42830 114 aa10.38□□□□□ -0.75
ITGA3-216ENST00000570989 C5orf38Q86SI9 138 aa10.37□□□□□ -0.75
ITGA3-216ENST00000570989 PEMTQ9UBM1 199 aa10.37□□□□□ -0.75
ITGA3-216ENST00000570989 SETD2Q9BYW2 2564 aaPredicted RBP10.37□□□□□ -0.75
ITGA3-216ENST00000570989 FAM19A3Q7Z5A8 133 aa10.36□□□□□ -0.75
ITGA3-216ENST00000570989 UBE2E2Q96LR5 201 aa10.36□□□□□ -0.75
ITGA3-216ENST00000570989 NSD1Q96L73 2696 aaPredicted RBP10.36□□□□□ -0.75
ITGA3-216ENST00000570989 FAM222AQ5U5X8 452 aa10.36□□□□□ -0.75
ITGA3-216ENST00000570989 DGAT2L7PQ6IED9 249 aa10.35□□□□□ -0.75
ITGA3-216ENST00000570989 RS1O15537 224 aa10.35□□□□□ -0.75
ITGA3-216ENST00000570989 C2orf48Q96LS8 159 aa10.35□□□□□ -0.75
ITGA3-216ENST00000570989 KRTAP1-1Q07627 177 aa10.34□□□□□ -0.75
ITGA3-216ENST00000570989 PRIMA1Q86XR5 153 aa10.34□□□□□ -0.75
ITGA3-216ENST00000570989 SEC61GP60059 68 aa10.34□□□□□ -0.75
ITGA3-216ENST00000570989 TMEM258P61165 79 aa10.34□□□□□ -0.75
ITGA3-216ENST00000570989 TMEM86BQ8N661 226 aa10.34□□□□□ -0.75
ITGA3-216ENST00000570989 COPS9Q8WXC6 57 aa10.33□□□□□ -0.76
ITGA3-216ENST00000570989 SMR3AQ99954 134 aa10.33□□□□□ -0.76
ITGA3-216ENST00000570989 TRAV13-1A0A0B4J241 112 aa10.32□□□□□ -0.76
ITGA3-216ENST00000570989 ATOX1O00244 68 aa10.32□□□□□ -0.76
ITGA3-216ENST00000570989 Q9HAA7 133 aa10.32□□□□□ -0.76
ITGA3-216ENST00000570989 DNAJC9-AS1A6NH13 148 aa10.32□□□□□ -0.76
ITGA3-216ENST00000570989 HIST1H4AP62805 103 aaKnown RBP10.32□□□□□ -0.76
ITGA3-216ENST00000570989 NF1P21359 2839 aa10.32□□□□□ -0.76
ITGA3-216ENST00000570989 MALP21145 153 aa10.31□□□□□ -0.76
ITGA3-216ENST00000570989 NTM-AS1Q6ZSK4 140 aa10.31□□□□□ -0.76
ITGA3-216ENST00000570989 C18orf65Q6ZTR6 163 aa10.31□□□□□ -0.76
ITGA3-216ENST00000570989 DPH3Q96FX2 82 aa10.31□□□□□ -0.76
ITGA3-216ENST00000570989 PRO0628Q9UI54 55 aa10.31□□□□□ -0.76
ITGA3-216ENST00000570989 SLURP1P55000 103 aa10.31□□□□□ -0.76
ITGA3-216ENST00000570989 DEFB136Q30KP8 78 aa10.31□□□□□ -0.76
ITGA3-216ENST00000570989 INAFM2P0DMQ5 153 aa10.3□□□□□ -0.76
ITGA3-216ENST00000570989 HIST2H2BDQ6DRA6 164 aa10.3□□□□□ -0.76
ITGA3-216ENST00000570989 FN1P02751 2386 aaKnown RBP10.3□□□□□ -0.76
ITGA3-216ENST00000570989 RPL28P46779 137 aaKnown RBP10.3□□□□□ -0.76
ITGA3-216ENST00000570989 C9orf129Q5T035 196 aaKnown RBP10.3□□□□□ -0.76
ITGA3-216ENST00000570989 LINC00337Q8N6G1 96 aa10.29□□□□□ -0.76
ITGA3-216ENST00000570989 ESM1Q9NQ30 184 aa10.29□□□□□ -0.76
ITGA3-216ENST00000570989 IGKV2-28A0A075B6P5 120 aa10.29□□□□□ -0.76
ITGA3-216ENST00000570989 IGKV2D-28P01615 120 aa10.29□□□□□ -0.76
ITGA3-216ENST00000570989 hADV29S1A0JD25 119 aa10.28□□□□□ -0.76
ITGA3-216ENST00000570989 MAP6D1Q9H9H5 199 aa10.28□□□□□ -0.76
ITGA3-216ENST00000570989 CDC42SE2Q9NRR3 84 aa10.28□□□□□ -0.76
ITGA3-216ENST00000570989 KHDC1LQ5JSQ8 128 aa10.28□□□□□ -0.76
ITGA3-216ENST00000570989 Q5XG85 94 aa10.28□□□□□ -0.76
ITGA3-216ENST00000570989 HRCT1Q6UXD1 115 aa10.27□□□□□ -0.77
ITGA3-216ENST00000570989 C4orf3Q8WVX3 66 aa10.27□□□□□ -0.77
ITGA3-216ENST00000570989 A0A087WYN8 130 aa10.27□□□□□ -0.77
ITGA3-216ENST00000570989 C4orf26Q17RF5 130 aa10.27□□□□□ -0.77
ITGA3-216ENST00000570989 C2CD3Q4AC94 2353 aa10.26□□□□□ -0.77
ITGA3-216ENST00000570989 TRAV13-2A0A0B4J235 113 aa10.26□□□□□ -0.77
ITGA3-216ENST00000570989 INSP01308 110 aa10.26□□□□□ -0.77
ITGA3-216ENST00000570989 IL17DQ8TAD2 202 aa10.26□□□□□ -0.77
ITGA3-216ENST00000570989 HIVEP2P31629 2446 aa10.26□□□□□ -0.77
ITGA3-216ENST00000570989 CRPP02741 224 aa10.26□□□□□ -0.77
ITGA3-216ENST00000570989 PF4P02776 101 aa10.26□□□□□ -0.77
ITGA3-216ENST00000570989 CYSTM1Q9H1C7 97 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms