RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 MUC4Q99102 2169 aa2.49□□□□□ -2.01
NUP88-202ENST00000570937 TRBV6-8A0A0A6YYG3 113 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 MUC21A0A0G2JKD1 596 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 LOC100131303A0A0U1RQF7 123 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 MUC21A0A140T8X8 626 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 C20orf202A1L168 122 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 IBA57-AS1B1ANH7 110 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 E9PLD3 99 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 TMEM262E9PQX1 116 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 K7EN84 100 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 TSPAN13O95857 204 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 MGPP08493 103 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 SRP19P09132 144 aaKnown RBP2.48□□□□□ -2.01
NUP88-202ENST00000570937 GZMBP10144 247 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 S100A2P29034 98 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 CTRLP40313 264 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 FOXA3P55318 350 aaPredicted RBP2.48□□□□□ -2.01
NUP88-202ENST00000570937 UBE2D3P61077 147 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 UBE2D2P62837 147 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 Q0VG73 95 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 LAGE3Q14657 143 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 WFDC10BQ8IUB3 73 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 TSKUQ8WUA8 353 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 RMI2Q96E14 147 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 CHCHD7Q9BUK0 85 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 RNASE7Q9H1E1 156 aaKnown RBP2.48□□□□□ -2.01
NUP88-202ENST00000570937 DPH3P1Q9H4G8 78 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 GEMIN7Q9H840 131 aaKnown RBP2.48□□□□□ -2.01
NUP88-202ENST00000570937 OSTCQ9NRP0 149 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 NAT8Q9UHE5 227 aa2.48□□□□□ -2.01
NUP88-202ENST00000570937 CARHSP1Q9Y2V2 147 aaKnown RBP2.48□□□□□ -2.01
NUP88-202ENST00000570937 TRBV25-1A0A075B6N4 114 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 TGIF2-C20orf24A0A0A6YYL0 155 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 A0A1B0GUT8 65 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 A0A1B0GW15 77 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 HIGD1CA8MV81 97 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 M0QY20 66 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 PPP1R17O96001 155 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 IGHV3-30P01768 117 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 IGHV3-33P01772 117 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 MT-ND4LP03901 98 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 LINC00694P0DN24 101 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 IGHV3-30-3P0DP02 117 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 IGHV3-30-5P0DP03 117 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 LINC00315P59091 139 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 FABP9Q0Z7S8 132 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 ADIRFQ15847 76 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 PYY3Q5JQD4 70 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 RASL11AQ6T310 242 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 PGLYRP4Q96LB8 373 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 LYSTQ99698 3801 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 VPS25Q9BRG1 176 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 CNFNQ9BYD5 112 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 NAT8BQ9UHF3 227 aa2.47□□□□□ -2.01
NUP88-202ENST00000570937 IGHV1-24A0A0C4DH33 117 aa2.46□□□□□ -2.02
NUP88-202ENST00000570937 C16orf90A8MZG2 172 aa2.46□□□□□ -2.02
NUP88-202ENST00000570937 UBE2L6O14933 153 aa2.46□□□□□ -2.02
NUP88-202ENST00000570937 PPP1R2P9O14990 202 aa2.46□□□□□ -2.02
NUP88-202ENST00000570937 APOC3P02656 99 aa2.46□□□□□ -2.02
NUP88-202ENST00000570937 CRPP02741 224 aa2.46□□□□□ -2.02
NUP88-202ENST00000570937 KRTAP10-1P60331 282 aa2.46□□□□□ -2.02
NUP88-202ENST00000570937 RPL23P62829 140 aaKnown RBP2.46□□□□□ -2.02
NUP88-202ENST00000570937 SMAGPQ0VAQ4 97 aa2.46□□□□□ -2.02
NUP88-202ENST00000570937 COL5A1-AS1Q5SY13 56 aa2.46□□□□□ -2.02
NUP88-202ENST00000570937 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
NUP88-202ENST00000570937 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
NUP88-202ENST00000570937 NIT1Q86X76 327 aa2.46□□□□□ -2.02
NUP88-202ENST00000570937 ISOC2Q96AB3 205 aa2.46□□□□□ -2.02
NUP88-202ENST00000570937 MRAP2Q96G30 205 aa2.46□□□□□ -2.02
NUP88-202ENST00000570937 SNHG12Q9BXW3 62 aa2.46□□□□□ -2.02
NUP88-202ENST00000570937 TMEM191AQ9H0A3 160 aa2.46□□□□□ -2.02
NUP88-202ENST00000570937 SMCO4Q9NRQ5 59 aa2.46□□□□□ -2.02
NUP88-202ENST00000570937 PCLOQ9Y6V0 5065 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 SMIM27A0A1W2PRY6 76 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 COLCA2A8K830 154 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 I3L3M4 83 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 NCR2O95944 276 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 ANGP03950 147 aaKnown RBP2.45□□□□□ -2.02
NUP88-202ENST00000570937 PMCHP20382 165 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 JOSD1Q15040 202 aaPredicted RBP2.45□□□□□ -2.02
NUP88-202ENST00000570937 MIAQ16674 131 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 IQCJQ1A5X6 159 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 AMMECR1LQ6DCA0 310 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 SPATA12Q7Z6I5 190 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 Q8N976 141 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 NUP35Q8NFH5 326 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 BTF3L4Q96K17 158 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 TMEM243Q9BU79 118 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 SEC11CQ9BY50 192 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 ST20Q9HBF5 79 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 KLK12Q9UKR0 248 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 V9GYV3 84 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 KIAA1109Q2LD37 5005 aa2.45□□□□□ -2.02
NUP88-202ENST00000570937 KMT2AQ03164 3969 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 IGKV2D-24A0A075B6R9 120 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 A0A087WTM6 91 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 TRAV8-4A0A0B4J246 113 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 TRAV26-2A0A0B4J265 109 aa2.44□□□□□ -2.02
NUP88-202ENST00000570937 TRBV6-5A0A0K0K1A5 114 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms