RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 FAM208BQ5VWN6 2430 aa5.78□□□□□ -1.48
TCF4-246ENST00000570287 LYRM9A8MSI8 78 aa5.78□□□□□ -1.48
TCF4-246ENST00000570287 COX7CP15954 63 aa5.78□□□□□ -1.48
TCF4-246ENST00000570287 LGALS3P17931 250 aaKnown RBP5.78□□□□□ -1.48
TCF4-246ENST00000570287 MRPL55Q7Z7F7 128 aaKnown RBP5.78□□□□□ -1.48
TCF4-246ENST00000570287 LINC00643Q86TS7 51 aa5.78□□□□□ -1.48
TCF4-246ENST00000570287 K7EQG2 157 aa5.77□□□□□ -1.49
TCF4-246ENST00000570287 SMCR5Q8TEV8 140 aa5.77□□□□□ -1.49
TCF4-246ENST00000570287 ZNF462Q96JM2 2506 aa5.77□□□□□ -1.49
TCF4-246ENST00000570287 MGPP08493 103 aa5.77□□□□□ -1.49
TCF4-246ENST00000570287 DEFB113Q30KQ7 82 aa5.77□□□□□ -1.49
TCF4-246ENST00000570287 SUMO4Q6EEV6 95 aa5.77□□□□□ -1.49
TCF4-246ENST00000570287 FBN2P35556 2912 aa5.77□□□□□ -1.49
TCF4-246ENST00000570287 POLR2KP53803 58 aaKnown RBP5.77□□□□□ -1.49
TCF4-246ENST00000570287 SYNJ2BPP57105 145 aa5.77□□□□□ -1.49
TCF4-246ENST00000570287 KIF25-AS1Q9Y6Z4 181 aa5.77□□□□□ -1.49
TCF4-246ENST00000570287 USP9YO00507 2555 aaPredicted RBP5.77□□□□□ -1.49
TCF4-246ENST00000570287 CR1P17927 2039 aa5.76□□□□□ -1.49
TCF4-246ENST00000570287 TRAV12-3A0A0B4J271 114 aa5.76□□□□□ -1.49
TCF4-246ENST00000570287 LINC00315P59091 139 aa5.76□□□□□ -1.49
TCF4-246ENST00000570287 KRTAP10-9P60411 292 aa5.76□□□□□ -1.49
TCF4-246ENST00000570287 A0A0J9YXY3 114 aa5.75□□□□□ -1.49
TCF4-246ENST00000570287 H7C2G1 150 aa5.75□□□□□ -1.49
TCF4-246ENST00000570287 Q1RN00 199 aa5.75□□□□□ -1.49
TCF4-246ENST00000570287 Q8N2B8 174 aa5.75□□□□□ -1.49
TCF4-246ENST00000570287 CSMD2Q7Z408 3487 aa5.75□□□□□ -1.49
TCF4-246ENST00000570287 PRRC2AP48634 2157 aaKnown RBP5.75□□□□□ -1.49
TCF4-246ENST00000570287 LRRK2Q5S007 2527 aa5.75□□□□□ -1.49
TCF4-246ENST00000570287 TRAV13-1A0A0B4J241 112 aa5.75□□□□□ -1.49
TCF4-246ENST00000570287 ZFYVE26Q68DK2 2539 aa5.75□□□□□ -1.49
TCF4-246ENST00000570287 MUC4Q99102 2169 aa5.75□□□□□ -1.49
TCF4-246ENST00000570287 TRACP01848 142 aa5.75□□□□□ -1.49
TCF4-246ENST00000570287 IGHV3-16A0A0C4DH30 117 aa5.74□□□□□ -1.49
TCF4-246ENST00000570287 A0A0U1RQV1 116 aa5.74□□□□□ -1.49
TCF4-246ENST00000570287 COX6CP09669 75 aa5.74□□□□□ -1.49
TCF4-246ENST00000570287 TRBV27A0A0K0K1C4 114 aa5.74□□□□□ -1.49
TCF4-246ENST00000570287 DSCR8Q96T75 97 aa5.74□□□□□ -1.49
TCF4-246ENST00000570287 POLQO75417 2590 aa5.74□□□□□ -1.49
TCF4-246ENST00000570287 ZANQ9Y493 2812 aa5.74□□□□□ -1.49
TCF4-246ENST00000570287 IGHV1OR15-1A0A075B7D0 117 aa5.73□□□□□ -1.49
TCF4-246ENST00000570287 RPL39P62891 51 aaKnown RBP5.73□□□□□ -1.49
TCF4-246ENST00000570287 PRR15Q8IV56 129 aa5.73□□□□□ -1.49
TCF4-246ENST00000570287 IGKV3-20P01619 116 aa5.73□□□□□ -1.49
TCF4-246ENST00000570287 C10orf25Q5T742 122 aa5.73□□□□□ -1.49
TCF4-246ENST00000570287 TRAV12-2A0A075B6T6 113 aa5.73□□□□□ -1.49
TCF4-246ENST00000570287 TRBV6-5A0A0K0K1A5 114 aa5.73□□□□□ -1.49
TCF4-246ENST00000570287 I3L3M4 83 aa5.73□□□□□ -1.49
TCF4-246ENST00000570287 TMEM61Q8N0U2 210 aa5.73□□□□□ -1.49
TCF4-246ENST00000570287 CLEC2BQ92478 149 aa5.73□□□□□ -1.49
TCF4-246ENST00000570287 CENPEQ02224 2701 aa5.73□□□□□ -1.49
TCF4-246ENST00000570287 ATOX1O00244 68 aa5.72□□□□□ -1.49
TCF4-246ENST00000570287 SPINK13Q1W4C9 94 aa5.72□□□□□ -1.49
TCF4-246ENST00000570287 C6orf223Q8N319 242 aa5.72□□□□□ -1.49
TCF4-246ENST00000570287 UPK3BQ9BT76 320 aa5.72□□□□□ -1.49
TCF4-246ENST00000570287 PTPN13Q12923 2485 aa5.72□□□□□ -1.49
TCF4-246ENST00000570287 MXRA5Q9NR99 2828 aa5.72□□□□□ -1.49
TCF4-246ENST00000570287 MIAQ16674 131 aa5.72□□□□□ -1.49
TCF4-246ENST00000570287 TIMM21Q9BVV7 248 aa5.72□□□□□ -1.49
TCF4-246ENST00000570287 CYSTM1Q9H1C7 97 aa5.72□□□□□ -1.49
TCF4-246ENST00000570287 NAV2Q8IVL1 2488 aa5.72□□□□□ -1.49
TCF4-246ENST00000570287 NDUFC2-KCTD14E9PQ53 114 aa5.71□□□□□ -1.49
TCF4-246ENST00000570287 KRTAP1-3Q8IUG1 177 aa5.71□□□□□ -1.49
TCF4-246ENST00000570287 DAND5Q8N907 189 aa5.71□□□□□ -1.49
TCF4-246ENST00000570287 A8MTW9 85 aa5.71□□□□□ -1.5
TCF4-246ENST00000570287 RPL18AQ02543 176 aaKnown RBP5.71□□□□□ -1.5
TCF4-246ENST00000570287 ADAMTSL4-AS1Q5T5F5 129 aa5.71□□□□□ -1.5
TCF4-246ENST00000570287 C4orf3Q8WVX3 66 aa5.71□□□□□ -1.5
TCF4-246ENST00000570287 CHCHD10Q8WYQ3 142 aaPredicted RBP5.71□□□□□ -1.5
TCF4-246ENST00000570287 C22orf24Q9Y442 160 aa5.71□□□□□ -1.5
TCF4-246ENST00000570287 DOPEY2Q9Y3R5 2298 aa5.71□□□□□ -1.5
TCF4-246ENST00000570287 IGLV5-37A0A075B6J1 123 aa5.71□□□□□ -1.5
TCF4-246ENST00000570287 Q6ZRP5 223 aa5.71□□□□□ -1.5
TCF4-246ENST00000570287 C18orf65Q6ZTR6 163 aa5.71□□□□□ -1.5
TCF4-246ENST00000570287 CREBBPQ92793 2442 aa5.7□□□□□ -1.5
TCF4-246ENST00000570287 TIMM17BO60830 172 aa5.7□□□□□ -1.5
TCF4-246ENST00000570287 IGHV3-30-3P0DP02 117 aa5.7□□□□□ -1.5
TCF4-246ENST00000570287 RHOHQ15669 191 aa5.7□□□□□ -1.5
TCF4-246ENST00000570287 DEFB136Q30KP8 78 aa5.7□□□□□ -1.5
TCF4-246ENST00000570287 M0QY20 66 aa5.7□□□□□ -1.5
TCF4-246ENST00000570287 DAZ2Q13117 558 aaKnown RBP5.7□□□□□ -1.5
TCF4-246ENST00000570287 FAM74A4Q5TZK3 123 aa5.7□□□□□ -1.5
TCF4-246ENST00000570287 DAZ4Q86SG3 579 aaKnown RBP5.7□□□□□ -1.5
TCF4-246ENST00000570287 DAZ3Q9NR90 486 aaKnown RBP5.7□□□□□ -1.5
TCF4-246ENST00000570287 DEFB131AP59861 70 aa5.69□□□□□ -1.5
TCF4-246ENST00000570287 LINC00242Q5T6M2 205 aa5.69□□□□□ -1.5
TCF4-246ENST00000570287 FAM222AQ5U5X8 452 aa5.69□□□□□ -1.5
TCF4-246ENST00000570287 WFDC11Q8NEX6 87 aa5.69□□□□□ -1.5
TCF4-246ENST00000570287 ABCA12Q86UK0 2595 aa5.69□□□□□ -1.5
TCF4-246ENST00000570287 TEX15Q9BXT5 2789 aa5.69□□□□□ -1.5
TCF4-246ENST00000570287 KNCNA6PVL3 124 aa5.69□□□□□ -1.5
TCF4-246ENST00000570287 J3QKU1 62 aa5.69□□□□□ -1.5
TCF4-246ENST00000570287 KRTAP21-3Q3LHN1 58 aa5.69□□□□□ -1.5
TCF4-246ENST00000570287 EPG5Q9HCE0 2579 aa5.69□□□□□ -1.5
TCF4-246ENST00000570287 IGHV3-38A0A0C4DH36 116 aa5.69□□□□□ -1.5
TCF4-246ENST00000570287 IGLV5-39A0A0G2JS06 123 aa5.69□□□□□ -1.5
TCF4-246ENST00000570287 hADV29S1A0JD25 119 aa5.69□□□□□ -1.5
TCF4-246ENST00000570287 MRPS36P82909 103 aaKnown RBP5.69□□□□□ -1.5
TCF4-246ENST00000570287 FP248Q71RG6 208 aaPredicted RBP5.69□□□□□ -1.5
TCF4-246ENST00000570287 BRK1Q8WUW1 75 aa5.68□□□□□ -1.5
TCF4-246ENST00000570287 FAM104AQ969W3 186 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms