RNA–Protein interactions for RNA: ENST00000569098.1

TNRC6A-216, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 587 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-216ENST00000569098 CDC42SE2Q9NRR3 84 aa3.94□□□□□ -1.78
TNRC6A-216ENST00000569098 JMJD1CQ15652 2540 aa3.94□□□□□ -1.78
TNRC6A-216ENST00000569098 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 IGHV1-58A0A0C4DH39 117 aa3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 A0A0J9YXV3 536 aa3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 A0A0J9YY99 117 aa3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 A0A1B0GUV1 79 aa3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 IGKV2-29A2NJV5 120 aaPredicted RBP3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 GAGE12JA6NER3 117 aa3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 SPART-AS1P0CW21 52 aa3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 LGALS3P17931 250 aaKnown RBP3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 GAGE4Q13068 117 aa3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 GAGE5Q13069 117 aa3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 KRTAP24-1Q3LI83 254 aa3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 SCGB1D4Q6XE38 83 aa3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 LINC00469Q8N7U9 141 aa3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 C3orf56Q8N813 242 aa3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 Q8NAQ8 132 aa3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 SPATA3Q8NHX4 192 aa3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 HIST1H4GQ99525 98 aa3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 OPRPNQ99935 248 aaPredicted RBP3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 GEMIN7Q9H840 131 aaKnown RBP3.93□□□□□ -1.78
TNRC6A-216ENST00000569098 NSD1Q96L73 2696 aaPredicted RBP3.92□□□□□ -1.78
TNRC6A-216ENST00000569098 IGHV3-38A0A0C4DH36 116 aa3.92□□□□□ -1.78
TNRC6A-216ENST00000569098 IGLV5-39A0A0G2JS06 123 aa3.92□□□□□ -1.78
TNRC6A-216ENST00000569098 H3BNG1 76 aa3.92□□□□□ -1.78
TNRC6A-216ENST00000569098 UBE2L6O14933 153 aa3.92□□□□□ -1.78
TNRC6A-216ENST00000569098 TIMM17BO60830 172 aa3.92□□□□□ -1.78
TNRC6A-216ENST00000569098 ATP5G1P05496 136 aa3.92□□□□□ -1.78
TNRC6A-216ENST00000569098 IGHV3-30-3P0DP02 117 aa3.92□□□□□ -1.78
TNRC6A-216ENST00000569098 IGHV4-30-4P0DP06 118 aa3.92□□□□□ -1.78
TNRC6A-216ENST00000569098 FAM222AQ5U5X8 452 aa3.92□□□□□ -1.78
TNRC6A-216ENST00000569098 AMMECR1LQ6DCA0 310 aa3.92□□□□□ -1.78
TNRC6A-216ENST00000569098 Q6ZUT4 128 aa3.92□□□□□ -1.78
TNRC6A-216ENST00000569098 LINC01561Q8N1V8 128 aa3.92□□□□□ -1.78
TNRC6A-216ENST00000569098 ATP6V0E2Q8NHE4 81 aa3.92□□□□□ -1.78
TNRC6A-216ENST00000569098 VSIG2Q96IQ7 327 aa3.92□□□□□ -1.78
TNRC6A-216ENST00000569098 TTTY13Q9BZ97 58 aa3.92□□□□□ -1.78
TNRC6A-216ENST00000569098 PPDPFQ9H3Y8 114 aa3.92□□□□□ -1.78
TNRC6A-216ENST00000569098 IGHV4-28A0A0C4DH34 117 aa3.91□□□□□ -1.78
TNRC6A-216ENST00000569098 A0A0J9YXY3 114 aa3.91□□□□□ -1.78
TNRC6A-216ENST00000569098 TMEM238C9JI98 176 aa3.91□□□□□ -1.78
TNRC6A-216ENST00000569098 DEFB130BP0DP73 79 aa3.91□□□□□ -1.78
TNRC6A-216ENST00000569098 DEFB130AP0DP74 79 aa3.91□□□□□ -1.78
TNRC6A-216ENST00000569098 FXYD2P54710 66 aa3.91□□□□□ -1.78
TNRC6A-216ENST00000569098 EMP1P54849 157 aa3.91□□□□□ -1.78
TNRC6A-216ENST00000569098 TCTAP57738 103 aa3.91□□□□□ -1.78
TNRC6A-216ENST00000569098 DAD1P61803 113 aa3.91□□□□□ -1.78
TNRC6A-216ENST00000569098 SRSF9Q13242 221 aaKnown RBP eCLIP3.91□□□□□ -1.78
TNRC6A-216ENST00000569098 LINC00242Q5T6M2 205 aa3.91□□□□□ -1.78
TNRC6A-216ENST00000569098 ZFAND6Q6FIF0 208 aa3.91□□□□□ -1.78
TNRC6A-216ENST00000569098 CEMP1Q6PRD7 247 aaPredicted RBP3.91□□□□□ -1.78
TNRC6A-216ENST00000569098 SFTA2Q6UW10 78 aa3.91□□□□□ -1.78
TNRC6A-216ENST00000569098 GTF2H5Q6ZYL4 71 aa3.91□□□□□ -1.78
TNRC6A-216ENST00000569098 DEFB104AQ8WTQ1 72 aa3.91□□□□□ -1.78
TNRC6A-216ENST00000569098 AGRNO00468 2067 aa3.9□□□□□ -1.78
TNRC6A-216ENST00000569098 ANK2Q01484 3957 aa3.9□□□□□ -1.79
TNRC6A-216ENST00000569098 IGHV3-30P01768 117 aa3.9□□□□□ -1.79
TNRC6A-216ENST00000569098 IGHV3-30-5P0DP03 117 aa3.9□□□□□ -1.79
TNRC6A-216ENST00000569098 IFITM1P13164 125 aa3.9□□□□□ -1.79
TNRC6A-216ENST00000569098 TSPEAR-AS2P59090 65 aa3.9□□□□□ -1.79
TNRC6A-216ENST00000569098 HERV-K104P63124 156 aa3.9□□□□□ -1.79
TNRC6A-216ENST00000569098 RPL24P83731 157 aaKnown RBP3.9□□□□□ -1.79
TNRC6A-216ENST00000569098 VAMP3Q15836 100 aa3.9□□□□□ -1.79
TNRC6A-216ENST00000569098 MRPL23Q16540 153 aaKnown RBP3.9□□□□□ -1.79
TNRC6A-216ENST00000569098 DEFB135Q30KP9 77 aa3.9□□□□□ -1.79
TNRC6A-216ENST00000569098 C12orf74Q32Q52 190 aa3.9□□□□□ -1.79
TNRC6A-216ENST00000569098 COPS9Q8WXC6 57 aa3.9□□□□□ -1.79
TNRC6A-216ENST00000569098 SPANXDQ9BXN6 97 aa3.9□□□□□ -1.79
TNRC6A-216ENST00000569098 KRTAP1-5Q9BYS1 174 aa3.9□□□□□ -1.79
TNRC6A-216ENST00000569098 C11orf68Q9H3H3 251 aaKnown RBP3.9□□□□□ -1.79
TNRC6A-216ENST00000569098 SPANXCQ9NY87 97 aa3.9□□□□□ -1.79
TNRC6A-216ENST00000569098 CDKN2A-AS1Q9UH64 79 aa3.9□□□□□ -1.79
TNRC6A-216ENST00000569098 SORL1Q92673 2214 aa3.89□□□□□ -1.79
TNRC6A-216ENST00000569098 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.89□□□□□ -1.79
TNRC6A-216ENST00000569098 LOC100131303A0A0U1RQF7 123 aa3.89□□□□□ -1.79
TNRC6A-216ENST00000569098 A0A1W2PPM0 123 aa3.89□□□□□ -1.79
TNRC6A-216ENST00000569098 NDUFA1O15239 70 aa3.89□□□□□ -1.79
TNRC6A-216ENST00000569098 FABP2P12104 132 aa3.89□□□□□ -1.79
TNRC6A-216ENST00000569098 CIRBPQ14011 172 aaKnown RBP3.89□□□□□ -1.79
TNRC6A-216ENST00000569098 NHP2Q9NX24 153 aaKnown RBP3.89□□□□□ -1.79
TNRC6A-216ENST00000569098 NDUFA12Q9UI09 145 aa3.89□□□□□ -1.79
TNRC6A-216ENST00000569098 IGHV3OR16-9A0A0B4J2B5 98 aa3.88□□□□□ -1.79
TNRC6A-216ENST00000569098 A0A0B4J2C4 111 aa3.88□□□□□ -1.79
TNRC6A-216ENST00000569098 SMIM1B2RUZ4 78 aa3.88□□□□□ -1.79
TNRC6A-216ENST00000569098 IGLL5B9A064 214 aa3.88□□□□□ -1.79
TNRC6A-216ENST00000569098 F5H768 121 aa3.88□□□□□ -1.79
TNRC6A-216ENST00000569098 H3BUT2 72 aa3.88□□□□□ -1.79
TNRC6A-216ENST00000569098 K7EP34 96 aa3.88□□□□□ -1.79
TNRC6A-216ENST00000569098 COX6A2Q02221 97 aa3.88□□□□□ -1.79
TNRC6A-216ENST00000569098 LYRM7Q5U5X0 104 aa3.88□□□□□ -1.79
TNRC6A-216ENST00000569098 C10orf126Q8N4M7 172 aa3.88□□□□□ -1.79
TNRC6A-216ENST00000569098 LITAFQ99732 161 aa3.88□□□□□ -1.79
TNRC6A-216ENST00000569098 CHCHD5Q9BSY4 110 aa3.88□□□□□ -1.79
TNRC6A-216ENST00000569098 ICOSQ9Y6W8 199 aa3.88□□□□□ -1.79
TNRC6A-216ENST00000569098 WNK1Q9H4A3 2382 aa3.88□□□□□ -1.79
TNRC6A-216ENST00000569098 A0A087WZ39 114 aa3.87□□□□□ -1.79
TNRC6A-216ENST00000569098 TRAV8-3A0A0A6YYJ7 113 aa3.87□□□□□ -1.79
TNRC6A-216ENST00000569098 TRAV13-1A0A0B4J241 112 aa3.87□□□□□ -1.79
TNRC6A-216ENST00000569098 LINC00959A0A1B0GUT2 108 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms