RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 LINC00242Q5T6M2 205 aa10.85□□□□□ -0.67
SNX20-204ENST00000568993 SCGB1D4Q6XE38 83 aa10.85□□□□□ -0.67
SNX20-204ENST00000568993 A0A0J9YY99 117 aa10.85□□□□□ -0.67
SNX20-204ENST00000568993 H3BRM9 83 aa10.85□□□□□ -0.67
SNX20-204ENST00000568993 IGHV3-30-3P0DP02 117 aa10.85□□□□□ -0.67
SNX20-204ENST00000568993 VSIG2Q96IQ7 327 aa10.85□□□□□ -0.67
SNX20-204ENST00000568993 HIST1H4GQ99525 98 aa10.85□□□□□ -0.67
SNX20-204ENST00000568993 SAMD5Q5TGI4 173 aa10.84□□□□□ -0.67
SNX20-204ENST00000568993 CDKN2A-AS1Q9UH64 79 aa10.84□□□□□ -0.67
SNX20-204ENST00000568993 SPANXB1Q9NS25 103 aaPredicted RBP10.83□□□□□ -0.68
SNX20-204ENST00000568993 COX6A2Q02221 97 aa10.82□□□□□ -0.68
SNX20-204ENST00000568993 ANAPC13Q9BS18 74 aa10.82□□□□□ -0.68
SNX20-204ENST00000568993 CHCHD5Q9BSY4 110 aa10.82□□□□□ -0.68
SNX20-204ENST00000568993 PPDPFQ9H3Y8 114 aa10.82□□□□□ -0.68
SNX20-204ENST00000568993 IGHV3-64A0A075B6Q5 118 aa10.82□□□□□ -0.68
SNX20-204ENST00000568993 TRAV8-3A0A0A6YYJ7 113 aa10.82□□□□□ -0.68
SNX20-204ENST00000568993 F8WDY8 70 aa10.81□□□□□ -0.68
SNX20-204ENST00000568993 TRAV13-1A0A0B4J241 112 aa10.8□□□□□ -0.68
SNX20-204ENST00000568993 SPINK8P0C7L1 97 aa10.8□□□□□ -0.68
SNX20-204ENST00000568993 SMIM13P0DJ93 91 aa10.8□□□□□ -0.68
SNX20-204ENST00000568993 IGLV4-60A0A075B6I1 120 aa10.8□□□□□ -0.68
SNX20-204ENST00000568993 IGLV5-39A0A0G2JS06 123 aa10.8□□□□□ -0.68
SNX20-204ENST00000568993 A0A1B0GUV1 79 aa10.8□□□□□ -0.68
SNX20-204ENST00000568993 F5H768 121 aa10.79□□□□□ -0.68
SNX20-204ENST00000568993 SRSF9Q13242 221 aaKnown RBP eCLIP10.79□□□□□ -0.68
SNX20-204ENST00000568993 C11orf68Q9H3H3 251 aaKnown RBP10.79□□□□□ -0.68
SNX20-204ENST00000568993 A0A1B0GWB2 263 aa10.79□□□□□ -0.68
SNX20-204ENST00000568993 C12orf74Q32Q52 190 aa10.79□□□□□ -0.68
SNX20-204ENST00000568993 C10orf126Q8N4M7 172 aa10.79□□□□□ -0.68
SNX20-204ENST00000568993 RETNQ9HD89 108 aa10.79□□□□□ -0.68
SNX20-204ENST00000568993 ANK2Q01484 3957 aa10.78□□□□□ -0.68
SNX20-204ENST00000568993 MRPL23Q16540 153 aaKnown RBP10.78□□□□□ -0.68
SNX20-204ENST00000568993 ZFAND6Q6FIF0 208 aa10.78□□□□□ -0.68
SNX20-204ENST00000568993 SH2D6Q7Z4S9 175 aa10.78□□□□□ -0.68
SNX20-204ENST00000568993 SPCS1Q9Y6A9 102 aa10.78□□□□□ -0.68
SNX20-204ENST00000568993 NHP2Q9NX24 153 aaKnown RBP10.77□□□□□ -0.68
SNX20-204ENST00000568993 NDUFA12Q9UI09 145 aa10.77□□□□□ -0.68
SNX20-204ENST00000568993 A0A0J9YXY3 114 aa10.77□□□□□ -0.69
SNX20-204ENST00000568993 H3BUT2 72 aa10.77□□□□□ -0.69
SNX20-204ENST00000568993 IGHV3-30P01768 117 aa10.77□□□□□ -0.69
SNX20-204ENST00000568993 IGHV3-30-5P0DP03 117 aa10.77□□□□□ -0.69
SNX20-204ENST00000568993 A0A1W2PPM0 123 aa10.76□□□□□ -0.69
SNX20-204ENST00000568993 SMIM1B2RUZ4 78 aa10.76□□□□□ -0.69
SNX20-204ENST00000568993 A0A096LPF7 62 aa10.75□□□□□ -0.69
SNX20-204ENST00000568993 RAB37Q96AX2 223 aa10.75□□□□□ -0.69
SNX20-204ENST00000568993 ICOSQ9Y6W8 199 aa10.75□□□□□ -0.69
SNX20-204ENST00000568993 NDUFA1O15239 70 aa10.74□□□□□ -0.69
SNX20-204ENST00000568993 HTN3P15516 51 aa10.74□□□□□ -0.69
SNX20-204ENST00000568993 TMEM262E9PQX1 116 aa10.74□□□□□ -0.69
SNX20-204ENST00000568993 H3BNG1 76 aa10.74□□□□□ -0.69
SNX20-204ENST00000568993 K7ERJ3 54 aa10.74□□□□□ -0.69
SNX20-204ENST00000568993 LITAFQ99732 161 aa10.74□□□□□ -0.69
SNX20-204ENST00000568993 NOTCH1P46531 2555 aa10.73□□□□□ -0.69
SNX20-204ENST00000568993 NHLRC4P0CG21 123 aaPredicted RBP10.73□□□□□ -0.69
SNX20-204ENST00000568993 IGHV3OR16-9A0A0B4J2B5 98 aa10.72□□□□□ -0.69
SNX20-204ENST00000568993 LINC00959A0A1B0GUT2 108 aa10.72□□□□□ -0.69
SNX20-204ENST00000568993 TIMM17BO60830 172 aa10.72□□□□□ -0.69
SNX20-204ENST00000568993 KPRPQ5T749 579 aaPredicted RBP10.72□□□□□ -0.69
SNX20-204ENST00000568993 LELP1Q5T871 98 aa10.72□□□□□ -0.69
SNX20-204ENST00000568993 F8W1H4 67 aa10.71□□□□□ -0.69
SNX20-204ENST00000568993 FABP2P12104 132 aa10.71□□□□□ -0.69
SNX20-204ENST00000568993 CDIP1Q9H305 208 aa10.71□□□□□ -0.69
SNX20-204ENST00000568993 SPANXDQ9BXN6 97 aa10.7□□□□□ -0.7
SNX20-204ENST00000568993 SPANXCQ9NY87 97 aa10.7□□□□□ -0.7
SNX20-204ENST00000568993 NBEAL1Q6ZS30 2694 aa10.7□□□□□ -0.7
SNX20-204ENST00000568993 IGLL5B9A064 214 aa10.7□□□□□ -0.7
SNX20-204ENST00000568993 MT-ATP8P03928 68 aa10.7□□□□□ -0.7
SNX20-204ENST00000568993 A0A087WZ39 114 aa10.69□□□□□ -0.7
SNX20-204ENST00000568993 IGKV3OR2-268A0A0C4DH90 116 aa10.69□□□□□ -0.7
SNX20-204ENST00000568993 A0A0J9YWU9 116 aa10.68□□□□□ -0.7
SNX20-204ENST00000568993 Q6ZTC4 211 aa10.68□□□□□ -0.7
SNX20-204ENST00000568993 ZNF625Q96I27 306 aaPredicted RBP10.68□□□□□ -0.7
SNX20-204ENST00000568993 NAA38Q9BRA0 125 aaKnown RBP10.68□□□□□ -0.7
SNX20-204ENST00000568993 TENM3Q9P273 2699 aa10.68□□□□□ -0.7
SNX20-204ENST00000568993 K7EIL1 84 aa10.68□□□□□ -0.7
SNX20-204ENST00000568993 SS18Q15532 418 aa10.68□□□□□ -0.7
SNX20-204ENST00000568993 ADAMTSL4-AS1Q5T5F5 129 aa10.68□□□□□ -0.7
SNX20-204ENST00000568993 MUSTN1Q8IVN3 82 aa10.68□□□□□ -0.7
SNX20-204ENST00000568993 Q9H8V8 135 aa10.68□□□□□ -0.7
SNX20-204ENST00000568993 TM2D3Q9BRN9 247 aa10.67□□□□□ -0.7
SNX20-204ENST00000568993 CCDC179H3BU77 68 aa10.67□□□□□ -0.7
SNX20-204ENST00000568993 CFC1BP0CG36 223 aa10.67□□□□□ -0.7
SNX20-204ENST00000568993 CFC1P0CG37 223 aa10.67□□□□□ -0.7
SNX20-204ENST00000568993 MIAQ16674 131 aa10.67□□□□□ -0.7
SNX20-204ENST00000568993 LYPD5Q6UWN5 251 aa10.67□□□□□ -0.7
SNX20-204ENST00000568993 LINC01561Q8N1V8 128 aa10.67□□□□□ -0.7
SNX20-204ENST00000568993 TMEM126AQ9H061 195 aa10.67□□□□□ -0.7
SNX20-204ENST00000568993 CIRBPQ14011 172 aaKnown RBP10.65□□□□□ -0.7
SNX20-204ENST00000568993 C11orf45Q8TAV5 145 aa10.65□□□□□ -0.7
SNX20-204ENST00000568993 COX7B2Q8TF08 81 aa10.65□□□□□ -0.7
SNX20-204ENST00000568993 MDFIQ99750 246 aa10.65□□□□□ -0.7
SNX20-204ENST00000568993 PRB2P02812 416 aaPredicted RBP10.65□□□□□ -0.71
SNX20-204ENST00000568993 IFITM1P13164 125 aa10.65□□□□□ -0.71
SNX20-204ENST00000568993 XGP55808 180 aa10.65□□□□□ -0.71
SNX20-204ENST00000568993 LINC00269Q8N2A0 174 aa10.65□□□□□ -0.71
SNX20-204ENST00000568993 APOMO95445 188 aa10.64□□□□□ -0.71
SNX20-204ENST00000568993 WFDC2Q14508 124 aa10.64□□□□□ -0.71
SNX20-204ENST00000568993 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.63□□□□□ -0.71
SNX20-204ENST00000568993 ANGP03950 147 aaKnown RBP10.63□□□□□ -0.71
SNX20-204ENST00000568993 MGAM2Q2M2H8 2515 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms