RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 AMMECR1LQ6DCA0 310 aa11.68□□□□□ -0.54
RAB40C-210ENST00000566290 TTTY13Q9BZ97 58 aa11.68□□□□□ -0.54
RAB40C-210ENST00000566290 IGHV1-58A0A0C4DH39 117 aa11.67□□□□□ -0.54
RAB40C-210ENST00000566290 VSIG2Q96IQ7 327 aa11.67□□□□□ -0.54
RAB40C-210ENST00000566290 CELA1Q9UNI1 258 aa11.67□□□□□ -0.54
RAB40C-210ENST00000566290 LGALS3P17931 250 aaKnown RBP11.66□□□□□ -0.54
RAB40C-210ENST00000566290 TCTAP57738 103 aa11.66□□□□□ -0.54
RAB40C-210ENST00000566290 GEMIN7Q9H840 131 aaKnown RBP11.66□□□□□ -0.54
RAB40C-210ENST00000566290 CCL25O15444 150 aa11.65□□□□□ -0.54
RAB40C-210ENST00000566290 TSPEAR-AS2P59090 65 aa11.65□□□□□ -0.54
RAB40C-210ENST00000566290 LINC00242Q5T6M2 205 aa11.65□□□□□ -0.54
RAB40C-210ENST00000566290 CEND1Q8N111 149 aa11.65□□□□□ -0.54
RAB40C-210ENST00000566290 ALMS1Q8TCU4 4167 aa11.64□□□□□ -0.55
RAB40C-210ENST00000566290 IGLV5-39A0A0G2JS06 123 aa11.64□□□□□ -0.55
RAB40C-210ENST00000566290 MRPL23Q16540 153 aaKnown RBP11.64□□□□□ -0.55
RAB40C-210ENST00000566290 COX11Q9Y6N1 276 aa11.64□□□□□ -0.55
RAB40C-210ENST00000566290 KIAA1109Q2LD37 5005 aa11.63□□□□□ -0.55
RAB40C-210ENST00000566290 A0A0J9YY99 117 aa11.63□□□□□ -0.55
RAB40C-210ENST00000566290 IGHV3-30-3P0DP02 117 aa11.63□□□□□ -0.55
RAB40C-210ENST00000566290 LINC00469Q8N7U9 141 aa11.63□□□□□ -0.55
RAB40C-210ENST00000566290 A0A1B0GWB2 263 aa11.62□□□□□ -0.55
RAB40C-210ENST00000566290 TAX1BP3O14907 124 aa11.62□□□□□ -0.55
RAB40C-210ENST00000566290 SCGB1D4Q6XE38 83 aa11.62□□□□□ -0.55
RAB40C-210ENST00000566290 CHCHD5Q9BSY4 110 aa11.62□□□□□ -0.55
RAB40C-210ENST00000566290 RNASE13Q5GAN3 156 aaKnown RBP11.61□□□□□ -0.55
RAB40C-210ENST00000566290 ICOSQ9Y6W8 199 aa11.61□□□□□ -0.55
RAB40C-210ENST00000566290 TMEM238LA0A1B0GVL6 79 aa11.6□□□□□ -0.55
RAB40C-210ENST00000566290 A6NJY4 79 aa11.6□□□□□ -0.55
RAB40C-210ENST00000566290 DEFB4AO15263 64 aa11.6□□□□□ -0.55
RAB40C-210ENST00000566290 TIMM17BO60830 172 aa11.6□□□□□ -0.55
RAB40C-210ENST00000566290 C12orf74Q32Q52 190 aa11.6□□□□□ -0.55
RAB40C-210ENST00000566290 LINC01561Q8N1V8 128 aa11.6□□□□□ -0.55
RAB40C-210ENST00000566290 CDKN2A-AS1Q9UH64 79 aa11.6□□□□□ -0.55
RAB40C-210ENST00000566290 Q6ZVH6 145 aa11.59□□□□□ -0.55
RAB40C-210ENST00000566290 HIST1H4GQ99525 98 aa11.59□□□□□ -0.55
RAB40C-210ENST00000566290 TMEM238C9JI98 176 aa11.58□□□□□ -0.56
RAB40C-210ENST00000566290 F5H768 121 aa11.58□□□□□ -0.56
RAB40C-210ENST00000566290 GCSHP23434 173 aa11.58□□□□□ -0.56
RAB40C-210ENST00000566290 FXYD2P54710 66 aa11.58□□□□□ -0.56
RAB40C-210ENST00000566290 GAGE6Q13070 117 aa11.58□□□□□ -0.56
RAB40C-210ENST00000566290 LELP1Q5T871 98 aa11.58□□□□□ -0.56
RAB40C-210ENST00000566290 SMIM1B2RUZ4 78 aa11.57□□□□□ -0.56
RAB40C-210ENST00000566290 NDUFA1O15239 70 aa11.57□□□□□ -0.56
RAB40C-210ENST00000566290 PPDPFQ9H3Y8 114 aa11.57□□□□□ -0.56
RAB40C-210ENST00000566290 DNAH10Q8IVF4 4471 aa11.56□□□□□ -0.56
RAB40C-210ENST00000566290 IGLV4-60A0A075B6I1 120 aa11.56□□□□□ -0.56
RAB40C-210ENST00000566290 A0A0J9YXY3 114 aa11.56□□□□□ -0.56
RAB40C-210ENST00000566290 RBX1P62877 108 aa11.56□□□□□ -0.56
RAB40C-210ENST00000566290 C10orf126Q8N4M7 172 aa11.56□□□□□ -0.56
RAB40C-210ENST00000566290 NDUFA12Q9UI09 145 aa11.56□□□□□ -0.56
RAB40C-210ENST00000566290 A0A096LPF7 62 aa11.55□□□□□ -0.56
RAB40C-210ENST00000566290 TRAV13-1A0A0B4J241 112 aa11.55□□□□□ -0.56
RAB40C-210ENST00000566290 COX6A2Q02221 97 aa11.55□□□□□ -0.56
RAB40C-210ENST00000566290 SFTA2Q6UW10 78 aa11.55□□□□□ -0.56
RAB40C-210ENST00000566290 SPANXDQ9BXN6 97 aa11.55□□□□□ -0.56
RAB40C-210ENST00000566290 SPANXCQ9NY87 97 aa11.55□□□□□ -0.56
RAB40C-210ENST00000566290 TRAV8-3A0A0A6YYJ7 113 aa11.54□□□□□ -0.56
RAB40C-210ENST00000566290 IGHV3OR16-9A0A0B4J2B5 98 aa11.54□□□□□ -0.56
RAB40C-210ENST00000566290 C9orf118A6NHY6 69 aa11.54□□□□□ -0.56
RAB40C-210ENST00000566290 IGHV3-30P01768 117 aa11.54□□□□□ -0.56
RAB40C-210ENST00000566290 SPINK8P0C7L1 97 aa11.54□□□□□ -0.56
RAB40C-210ENST00000566290 SMIM13P0DJ93 91 aa11.54□□□□□ -0.56
RAB40C-210ENST00000566290 IGHV3-30-5P0DP03 117 aa11.54□□□□□ -0.56
RAB40C-210ENST00000566290 HECTD4Q9Y4D8 3996 aa11.54□□□□□ -0.56
RAB40C-210ENST00000566290 A0A087WZ39 114 aa11.53□□□□□ -0.56
RAB40C-210ENST00000566290 A0A0J9YWU9 116 aa11.53□□□□□ -0.56
RAB40C-210ENST00000566290 PTTG1IPP53801 180 aa11.53□□□□□ -0.56
RAB40C-210ENST00000566290 HERV-K104P63124 156 aa11.53□□□□□ -0.56
RAB40C-210ENST00000566290 SRSF9Q13242 221 aaKnown RBP eCLIP11.53□□□□□ -0.56
RAB40C-210ENST00000566290 LITAFQ99732 161 aa11.53□□□□□ -0.56
RAB40C-210ENST00000566290 LINC00959A0A1B0GUT2 108 aa11.52□□□□□ -0.57
RAB40C-210ENST00000566290 ZNF625Q96I27 306 aaPredicted RBP11.51□□□□□ -0.57
RAB40C-210ENST00000566290 IFITM1P13164 125 aa11.5□□□□□ -0.57
RAB40C-210ENST00000566290 SS18Q15532 418 aa11.5□□□□□ -0.57
RAB40C-210ENST00000566290 IGHV3-64A0A075B6Q5 118 aa11.49□□□□□ -0.57
RAB40C-210ENST00000566290 NHP2Q9NX24 153 aaKnown RBP11.49□□□□□ -0.57
RAB40C-210ENST00000566290 K7EP13 123 aa11.48□□□□□ -0.57
RAB40C-210ENST00000566290 RPL24P83731 157 aaKnown RBP11.48□□□□□ -0.57
RAB40C-210ENST00000566290 MIAQ16674 131 aa11.48□□□□□ -0.57
RAB40C-210ENST00000566290 Q6ZTC4 211 aa11.48□□□□□ -0.57
RAB40C-210ENST00000566290 C11orf45Q8TAV5 145 aa11.48□□□□□ -0.57
RAB40C-210ENST00000566290 COPS9Q8WXC6 57 aa11.48□□□□□ -0.57
RAB40C-210ENST00000566290 PRR34Q9NV39 138 aa11.48□□□□□ -0.57
RAB40C-210ENST00000566290 KMT2AQ03164 3969 aa11.47□□□□□ -0.57
RAB40C-210ENST00000566290 TMEM262E9PQX1 116 aa11.47□□□□□ -0.57
RAB40C-210ENST00000566290 HTN3P15516 51 aa11.47□□□□□ -0.57
RAB40C-210ENST00000566290 UBE2V1Q13404 147 aa11.47□□□□□ -0.57
RAB40C-210ENST00000566290 LYPD5Q6UWN5 251 aa11.47□□□□□ -0.57
RAB40C-210ENST00000566290 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.46□□□□□ -0.57
RAB40C-210ENST00000566290 A0A0B4J2C4 111 aa11.46□□□□□ -0.57
RAB40C-210ENST00000566290 CIRBPQ14011 172 aaKnown RBP11.46□□□□□ -0.57
RAB40C-210ENST00000566290 CD164L2Q6UWJ8 174 aa11.46□□□□□ -0.57
RAB40C-210ENST00000566290 A0A1W2PPM0 123 aa11.45□□□□□ -0.58
RAB40C-210ENST00000566290 ABCA13Q86UQ4 5058 aa11.45□□□□□ -0.58
RAB40C-210ENST00000566290 TRAV10A0A0B4J240 114 aa11.44□□□□□ -0.58
RAB40C-210ENST00000566290 C15orf53Q8NAA6 179 aa11.44□□□□□ -0.58
RAB40C-210ENST00000566290 COX7B2Q8TF08 81 aa11.44□□□□□ -0.58
RAB40C-210ENST00000566290 Q9H8V8 135 aa11.44□□□□□ -0.58
RAB40C-210ENST00000566290 DEFB131BA0A096LNP1 70 aa11.43□□□□□ -0.58
RAB40C-210ENST00000566290 IGLL5B9A064 214 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms