RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 LINC00959A0A1B0GUT2 108 aa13.43□□□□□ -0.26
CLN6-205ENST00000564846 CCL25O15444 150 aa13.43□□□□□ -0.26
CLN6-205ENST00000564846 TAL2Q16559 108 aa13.43□□□□□ -0.26
CLN6-205ENST00000564846 KRTAP21-3Q3LHN1 58 aa13.43□□□□□ -0.26
CLN6-205ENST00000564846 IGLV5-39A0A0G2JS06 123 aa13.42□□□□□ -0.26
CLN6-205ENST00000564846 SS18Q15532 418 aa13.41□□□□□ -0.26
CLN6-205ENST00000564846 SMIM1B2RUZ4 78 aa13.4□□□□□ -0.26
CLN6-205ENST00000564846 ORAOV1Q8WV07 137 aa13.4□□□□□ -0.26
CLN6-205ENST00000564846 ANGP03950 147 aaKnown RBP13.4□□□□□ -0.26
CLN6-205ENST00000564846 LINC00269Q8N2A0 174 aa13.4□□□□□ -0.26
CLN6-205ENST00000564846 ZFAND6Q6FIF0 208 aa13.39□□□□□ -0.27
CLN6-205ENST00000564846 C15orf53Q8NAA6 179 aa13.39□□□□□ -0.27
CLN6-205ENST00000564846 HIST1H4GQ99525 98 aa13.39□□□□□ -0.27
CLN6-205ENST00000564846 IGHV3OR16-9A0A0B4J2B5 98 aa13.38□□□□□ -0.27
CLN6-205ENST00000564846 REG3AQ06141 175 aa13.37□□□□□ -0.27
CLN6-205ENST00000564846 Q8N3U1 123 aa13.37□□□□□ -0.27
CLN6-205ENST00000564846 TM2D2Q9BX73 214 aa13.37□□□□□ -0.27
CLN6-205ENST00000564846 NDUFA12Q9UI09 145 aa13.37□□□□□ -0.27
CLN6-205ENST00000564846 GCSHP23434 173 aa13.37□□□□□ -0.27
CLN6-205ENST00000564846 ESRGQ1W209 222 aa13.37□□□□□ -0.27
CLN6-205ENST00000564846 CEND1Q8N111 149 aa13.37□□□□□ -0.27
CLN6-205ENST00000564846 A0A087WZ39 114 aa13.36□□□□□ -0.27
CLN6-205ENST00000564846 CLPSL2Q6UWE3 100 aa13.36□□□□□ -0.27
CLN6-205ENST00000564846 C10orf126Q8N4M7 172 aa13.36□□□□□ -0.27
CLN6-205ENST00000564846 SPANXB1Q9NS25 103 aaPredicted RBP13.36□□□□□ -0.27
CLN6-205ENST00000564846 A6NDN8 102 aa13.35□□□□□ -0.27
CLN6-205ENST00000564846 NHLRC4P0CG21 123 aaPredicted RBP13.35□□□□□ -0.27
CLN6-205ENST00000564846 A0A0J9YXY3 114 aa13.34□□□□□ -0.27
CLN6-205ENST00000564846 XCL1P47992 114 aa13.34□□□□□ -0.27
CLN6-205ENST00000564846 SRSF9Q13242 221 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLN6-205ENST00000564846 NDUFA1O15239 70 aa13.33□□□□□ -0.28
CLN6-205ENST00000564846 WFDC10BQ8IUB3 73 aa13.33□□□□□ -0.28
CLN6-205ENST00000564846 PRR34Q9NV39 138 aa13.33□□□□□ -0.28
CLN6-205ENST00000564846 PTTG1IPP53801 180 aa13.32□□□□□ -0.28
CLN6-205ENST00000564846 FXYD2P54710 66 aa13.32□□□□□ -0.28
CLN6-205ENST00000564846 LINC01561Q8N1V8 128 aa13.32□□□□□ -0.28
CLN6-205ENST00000564846 DNAH9Q9NYC9 4486 aa13.32□□□□□ -0.28
CLN6-205ENST00000564846 A0A1B0GV90 55 aa13.32□□□□□ -0.28
CLN6-205ENST00000564846 TMEM238C9JI98 176 aa13.32□□□□□ -0.28
CLN6-205ENST00000564846 CD164L2Q6UWJ8 174 aa13.32□□□□□ -0.28
CLN6-205ENST00000564846 C5orf38Q86SI9 138 aa13.32□□□□□ -0.28
CLN6-205ENST00000564846 KLK12Q9UKR0 248 aa13.32□□□□□ -0.28
CLN6-205ENST00000564846 CHCHD10Q8WYQ3 142 aaPredicted RBP13.31□□□□□ -0.28
CLN6-205ENST00000564846 IGHV3-30P01768 117 aa13.3□□□□□ -0.28
CLN6-205ENST00000564846 IGHV3-33P01772 117 aa13.3□□□□□ -0.28
CLN6-205ENST00000564846 IGHV3-30-5P0DP03 117 aa13.3□□□□□ -0.28
CLN6-205ENST00000564846 Q9H8V8 135 aa13.3□□□□□ -0.28
CLN6-205ENST00000564846 DNHD1Q96M86 4753 aa13.29□□□□□ -0.28
CLN6-205ENST00000564846 COX7B2Q8TF08 81 aa13.29□□□□□ -0.28
CLN6-205ENST00000564846 TIMM17BO60830 172 aa13.28□□□□□ -0.28
CLN6-205ENST00000564846 IGLV10-54A0A075B6I4 117 aa13.27□□□□□ -0.28
CLN6-205ENST00000564846 IGLL5B9A064 214 aa13.27□□□□□ -0.28
CLN6-205ENST00000564846 K7EP13 123 aa13.27□□□□□ -0.28
CLN6-205ENST00000564846 CRPP02741 224 aa13.27□□□□□ -0.28
CLN6-205ENST00000564846 HERV-K104P63124 156 aa13.27□□□□□ -0.28
CLN6-205ENST00000564846 ENHOQ6UWT2 76 aa13.27□□□□□ -0.28
CLN6-205ENST00000564846 ZNF625Q96I27 306 aaPredicted RBP13.27□□□□□ -0.28
CLN6-205ENST00000564846 TMEM238LA0A1B0GVL6 79 aa13.27□□□□□ -0.29
CLN6-205ENST00000564846 A6NJY4 79 aa13.27□□□□□ -0.29
CLN6-205ENST00000564846 TAX1BP3O14907 124 aa13.27□□□□□ -0.29
CLN6-205ENST00000564846 LINC01556Q5JQF7 62 aa13.27□□□□□ -0.29
CLN6-205ENST00000564846 LITAFQ99732 161 aa13.27□□□□□ -0.29
CLN6-205ENST00000564846 TRAV8-4A0A0B4J246 113 aa13.26□□□□□ -0.29
CLN6-205ENST00000564846 COX7A2LO14548 114 aa13.26□□□□□ -0.29
CLN6-205ENST00000564846 TOMM7Q9P0U1 55 aa13.26□□□□□ -0.29
CLN6-205ENST00000564846 CIRBPQ14011 172 aaKnown RBP13.25□□□□□ -0.29
CLN6-205ENST00000564846 Q6ZVH6 145 aa13.25□□□□□ -0.29
CLN6-205ENST00000564846 SMIM13P0DJ93 91 aa13.25□□□□□ -0.29
CLN6-205ENST00000564846 CCL18P55774 89 aa13.25□□□□□ -0.29
CLN6-205ENST00000564846 UBE2WQ96B02 151 aa13.25□□□□□ -0.29
CLN6-205ENST00000564846 SPANXDQ9BXN6 97 aa13.25□□□□□ -0.29
CLN6-205ENST00000564846 NHP2Q9NX24 153 aaKnown RBP13.25□□□□□ -0.29
CLN6-205ENST00000564846 SPANXCQ9NY87 97 aa13.25□□□□□ -0.29
CLN6-205ENST00000564846 COX11Q9Y6N1 276 aa13.25□□□□□ -0.29
CLN6-205ENST00000564846 FOXI1Q12951 378 aa13.24□□□□□ -0.29
CLN6-205ENST00000564846 MIAQ16674 131 aa13.24□□□□□ -0.29
CLN6-205ENST00000564846 SFTA2Q6UW10 78 aa13.24□□□□□ -0.29
CLN6-205ENST00000564846 DNAH10OSP0CZ25 163 aa13.23□□□□□ -0.29
CLN6-205ENST00000564846 LINC00588Q9Y4M8 146 aa13.23□□□□□ -0.29
CLN6-205ENST00000564846 MALP21145 153 aa13.22□□□□□ -0.29
CLN6-205ENST00000564846 Q8IZM0 81 aa13.22□□□□□ -0.29
CLN6-205ENST00000564846 GAGE12HA6NDE8 117 aa13.22□□□□□ -0.29
CLN6-205ENST00000564846 ADAMTSL4-AS1Q5T5F5 129 aa13.22□□□□□ -0.29
CLN6-205ENST00000564846 A0A1B0GWB2 263 aa13.21□□□□□ -0.29
CLN6-205ENST00000564846 PRSS2P07478 247 aa13.21□□□□□ -0.29
CLN6-205ENST00000564846 C6orf226Q5I0X4 101 aa13.21□□□□□ -0.29
CLN6-205ENST00000564846 COL7A1Q02388 2944 aa13.21□□□□□ -0.3
CLN6-205ENST00000564846 RPL24P83731 157 aaKnown RBP13.2□□□□□ -0.3
CLN6-205ENST00000564846 MUSTN1Q8IVN3 82 aa13.2□□□□□ -0.3
CLN6-205ENST00000564846 K7ERJ3 54 aa13.2□□□□□ -0.3
CLN6-205ENST00000564846 MEIG1Q5JSS6 88 aa13.2□□□□□ -0.3
CLN6-205ENST00000564846 STAB2Q8WWQ8 2551 aa13.2□□□□□ -0.3
CLN6-205ENST00000564846 APOMO95445 188 aa13.19□□□□□ -0.3
CLN6-205ENST00000564846 UPK3BQ9BT76 320 aa13.19□□□□□ -0.3
CLN6-205ENST00000564846 IFITM1P13164 125 aa13.18□□□□□ -0.3
CLN6-205ENST00000564846 RAB37Q96AX2 223 aa13.18□□□□□ -0.3
CLN6-205ENST00000564846 C9orf118A6NHY6 69 aa13.17□□□□□ -0.3
CLN6-205ENST00000564846 CXCL5P42830 114 aa13.16□□□□□ -0.3
CLN6-205ENST00000564846 COPS9Q8WXC6 57 aa13.16□□□□□ -0.3
CLN6-205ENST00000564846 KLK5Q9Y337 293 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms