RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 GCGP01275 180 aa3.36□□□□□ -1.87
HERPUD1-208ENST00000563911 ANGP03950 147 aaKnown RBP3.36□□□□□ -1.87
HERPUD1-208ENST00000563911 S100A2P29034 98 aa3.36□□□□□ -1.87
HERPUD1-208ENST00000563911 CSN1S1P47710 185 aa3.36□□□□□ -1.87
HERPUD1-208ENST00000563911 LGALSLQ3ZCW2 172 aaPredicted RBP3.36□□□□□ -1.87
HERPUD1-208ENST00000563911 PYDC2Q56P42 97 aa3.36□□□□□ -1.87
HERPUD1-208ENST00000563911 TCTE3Q8IZS6 198 aa3.36□□□□□ -1.87
HERPUD1-208ENST00000563911 C15orf56Q8N910 161 aa3.36□□□□□ -1.87
HERPUD1-208ENST00000563911 KCNS1Q96KK3 526 aa3.36□□□□□ -1.87
HERPUD1-208ENST00000563911 CHCHD7Q9BUK0 85 aa3.36□□□□□ -1.87
HERPUD1-208ENST00000563911 ACTR3CQ9C0K3 210 aaPredicted RBP3.36□□□□□ -1.87
HERPUD1-208ENST00000563911 OTORQ9NRC9 128 aa3.36□□□□□ -1.87
HERPUD1-208ENST00000563911 LYRM2Q9NU23 88 aaPredicted RBP3.36□□□□□ -1.87
HERPUD1-208ENST00000563911 IGHV3-64A0A075B6Q5 118 aa3.35□□□□□ -1.87
HERPUD1-208ENST00000563911 A0A096LNI7 61 aa3.35□□□□□ -1.87
HERPUD1-208ENST00000563911 IGKV2-24A0A0C4DH68 120 aa3.35□□□□□ -1.87
HERPUD1-208ENST00000563911 A8MWV9 139 aa3.35□□□□□ -1.87
HERPUD1-208ENST00000563911 H7C1H1 209 aa3.35□□□□□ -1.87
HERPUD1-208ENST00000563911 OR7C2O60412 319 aa3.35□□□□□ -1.87
HERPUD1-208ENST00000563911 PMCHP20382 165 aa3.35□□□□□ -1.87
HERPUD1-208ENST00000563911 UBE2L3P68036 154 aaKnown RBP3.35□□□□□ -1.87
HERPUD1-208ENST00000563911 ELOBQ15370 118 aa3.35□□□□□ -1.87
HERPUD1-208ENST00000563911 MIAQ16674 131 aa3.35□□□□□ -1.87
HERPUD1-208ENST00000563911 MRPL55Q7Z7F7 128 aaKnown RBP3.35□□□□□ -1.87
HERPUD1-208ENST00000563911 DEDD2Q8WXF8 326 aa3.35□□□□□ -1.87
HERPUD1-208ENST00000563911 NMES1Q9C002 83 aa3.35□□□□□ -1.87
HERPUD1-208ENST00000563911 NKX6-2Q9C056 277 aaPredicted RBP3.35□□□□□ -1.87
HERPUD1-208ENST00000563911 VAX2Q9UIW0 290 aa3.35□□□□□ -1.87
HERPUD1-208ENST00000563911 ZFP30Q9Y2G7 519 aa3.35□□□□□ -1.87
HERPUD1-208ENST00000563911 IGLV4-60A0A075B6I1 120 aa3.34□□□□□ -1.87
HERPUD1-208ENST00000563911 TGIF2-C20orf24A0A0A6YYL0 155 aa3.34□□□□□ -1.87
HERPUD1-208ENST00000563911 GRIFINA4D1Z8 144 aa3.34□□□□□ -1.87
HERPUD1-208ENST00000563911 H3BVH4 76 aa3.34□□□□□ -1.87
HERPUD1-208ENST00000563911 TAAR5O14804 337 aa3.34□□□□□ -1.87
HERPUD1-208ENST00000563911 HMGB3O15347 200 aaKnown RBP3.34□□□□□ -1.87
HERPUD1-208ENST00000563911 PDE6DO43924 150 aa3.34□□□□□ -1.87
HERPUD1-208ENST00000563911 ARMS2P0C7Q2 107 aa3.34□□□□□ -1.87
HERPUD1-208ENST00000563911 TMBIM6P55061 237 aa3.34□□□□□ -1.87
HERPUD1-208ENST00000563911 CKS1BP61024 79 aa3.34□□□□□ -1.87
HERPUD1-208ENST00000563911 LINC00483Q53H64 154 aa3.34□□□□□ -1.87
HERPUD1-208ENST00000563911 FAM74A4Q5TZK3 123 aa3.34□□□□□ -1.87
HERPUD1-208ENST00000563911 TEX261Q6UWH6 196 aa3.34□□□□□ -1.87
HERPUD1-208ENST00000563911 OR5C1Q8NGR4 320 aa3.34□□□□□ -1.87
HERPUD1-208ENST00000563911 WDR61Q9GZS3 305 aaKnown RBP3.34□□□□□ -1.87
HERPUD1-208ENST00000563911 WFDC1Q9HC57 220 aa3.34□□□□□ -1.87
HERPUD1-208ENST00000563911 OR5AC2Q9NZP5 309 aa3.34□□□□□ -1.87
HERPUD1-208ENST00000563911 IGLV1-50A0A075B6I6 118 aa3.33□□□□□ -1.88
HERPUD1-208ENST00000563911 TRBV7-3A0A075B6L6 115 aa3.33□□□□□ -1.88
HERPUD1-208ENST00000563911 PLA2G10O15496 165 aa3.33□□□□□ -1.88
HERPUD1-208ENST00000563911 HSBP1O75506 76 aa3.33□□□□□ -1.88
HERPUD1-208ENST00000563911 CRPP02741 224 aa3.33□□□□□ -1.88
HERPUD1-208ENST00000563911 TCRAP04437 139 aa3.33□□□□□ -1.88
HERPUD1-208ENST00000563911 SEC11BP0C7V7 166 aa3.33□□□□□ -1.88
HERPUD1-208ENST00000563911 FAUP35544 74 aaKnown RBP3.33□□□□□ -1.88
HERPUD1-208ENST00000563911 ORMDL2Q53FV1 153 aa3.33□□□□□ -1.88
HERPUD1-208ENST00000563911 AKR1C8PQ5T2L2 129 aa3.33□□□□□ -1.88
HERPUD1-208ENST00000563911 PRNTQ86SH4 94 aa3.33□□□□□ -1.88
HERPUD1-208ENST00000563911 LINC00526Q96FQ7 95 aa3.33□□□□□ -1.88
HERPUD1-208ENST00000563911 MRAP2Q96G30 205 aa3.33□□□□□ -1.88
HERPUD1-208ENST00000563911 ZNF471Q9BX82 626 aaPredicted RBP3.33□□□□□ -1.88
HERPUD1-208ENST00000563911 CYTL1Q9NRR1 136 aa3.33□□□□□ -1.88
HERPUD1-208ENST00000563911 IGKV2-28A0A075B6P5 120 aa3.32□□□□□ -1.88
HERPUD1-208ENST00000563911 A0A1W2PNN7 141 aa3.32□□□□□ -1.88
HERPUD1-208ENST00000563911 UPK1BO75841 260 aa3.32□□□□□ -1.88
HERPUD1-208ENST00000563911 SIX6O95475 246 aa3.32□□□□□ -1.88
HERPUD1-208ENST00000563911 IGKV2D-28P01615 120 aa3.32□□□□□ -1.88
HERPUD1-208ENST00000563911 S100A10P60903 97 aa3.32□□□□□ -1.88
HERPUD1-208ENST00000563911 FABP9Q0Z7S8 132 aa3.32□□□□□ -1.88
HERPUD1-208ENST00000563911 OCIAD2Q56VL3 154 aa3.32□□□□□ -1.88
HERPUD1-208ENST00000563911 ORAOV1Q8WV07 137 aa3.32□□□□□ -1.88
HERPUD1-208ENST00000563911 TIMM17AQ99595 171 aa3.32□□□□□ -1.88
HERPUD1-208ENST00000563911 SH3BGRL3Q9H299 93 aa3.32□□□□□ -1.88
HERPUD1-208ENST00000563911 IL36BQ9NZH7 164 aa3.32□□□□□ -1.88
HERPUD1-208ENST00000563911 V9GYY9 64 aa3.32□□□□□ -1.88
HERPUD1-208ENST00000563911 TRBV10-1A0A0K0K1A3 114 aa3.31□□□□□ -1.88
HERPUD1-208ENST00000563911 IFNA1P01562 189 aa3.31□□□□□ -1.88
HERPUD1-208ENST00000563911 SYCNQ0VAF6 134 aa3.31□□□□□ -1.88
HERPUD1-208ENST00000563911 Q5BKY6 102 aa3.31□□□□□ -1.88
HERPUD1-208ENST00000563911 COL5A1-AS1Q5SY13 56 aa3.31□□□□□ -1.88
HERPUD1-208ENST00000563911 SVBPQ8N300 66 aa3.31□□□□□ -1.88
HERPUD1-208ENST00000563911 SMIM20Q8N5G0 67 aa3.31□□□□□ -1.88
HERPUD1-208ENST00000563911 CMTM2Q8TAZ6 248 aa3.31□□□□□ -1.88
HERPUD1-208ENST00000563911 ISOC2Q96AB3 205 aa3.31□□□□□ -1.88
HERPUD1-208ENST00000563911 SNHG12Q9BXW3 62 aa3.31□□□□□ -1.88
HERPUD1-208ENST00000563911 SS18L2Q9UHA2 77 aa3.31□□□□□ -1.88
HERPUD1-208ENST00000563911 PSORS1C2Q9UIG4 136 aa3.31□□□□□ -1.88
HERPUD1-208ENST00000563911 TMSB15BA0A087X1C1 80 aa3.3□□□□□ -1.88
HERPUD1-208ENST00000563911 A0A0U1RQV1 116 aa3.3□□□□□ -1.88
HERPUD1-208ENST00000563911 MUC21A0A140T8X8 626 aa3.3□□□□□ -1.88
HERPUD1-208ENST00000563911 TMEM218A2RU14 115 aa3.3□□□□□ -1.88
HERPUD1-208ENST00000563911 M0R381 172 aa3.3□□□□□ -1.88
HERPUD1-208ENST00000563911 HBG1P69891 147 aa3.3□□□□□ -1.88
HERPUD1-208ENST00000563911 HBG2P69892 147 aa3.3□□□□□ -1.88
HERPUD1-208ENST00000563911 KHDC3LQ587J8 217 aa3.3□□□□□ -1.88
HERPUD1-208ENST00000563911 KRTAP4-1Q9BYQ7 146 aa3.3□□□□□ -1.88
HERPUD1-208ENST00000563911 EPDR1Q9UM22 224 aa3.3□□□□□ -1.88
HERPUD1-208ENST00000563911 ARL2-SNX15V9GYD0 113 aa3.3□□□□□ -1.88
HERPUD1-208ENST00000563911 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 TRBV6-1A0A0K0K1D8 114 aa3.29□□□□□ -1.88
HERPUD1-208ENST00000563911 NAP1L6A6NFF2 107 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms