RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 PRRC2AP48634 2157 aaKnown RBP5.37□□□□□ -1.55
CFDP1-202ENST00000562602 APCP25054 2843 aa5.37□□□□□ -1.55
CFDP1-202ENST00000562602 IGHV3OR16-12A0A075B7B8 117 aa5.36□□□□□ -1.55
CFDP1-202ENST00000562602 TRAV26-1A0A087WT03 109 aa5.36□□□□□ -1.55
CFDP1-202ENST00000562602 TRAV13-2A0A0B4J235 113 aa5.36□□□□□ -1.55
CFDP1-202ENST00000562602 SNCGO76070 127 aa5.36□□□□□ -1.55
CFDP1-202ENST00000562602 DEFB121Q5J5C9 76 aa5.36□□□□□ -1.55
CFDP1-202ENST00000562602 ADAMTSL4-AS1Q5T5F5 129 aa5.36□□□□□ -1.55
CFDP1-202ENST00000562602 LINC00242Q5T6M2 205 aa5.36□□□□□ -1.55
CFDP1-202ENST00000562602 FAM222AQ5U5X8 452 aa5.36□□□□□ -1.55
CFDP1-202ENST00000562602 CEMP1Q6PRD7 247 aaPredicted RBP5.36□□□□□ -1.55
CFDP1-202ENST00000562602 LINC00308Q8TCZ7 52 aa5.36□□□□□ -1.55
CFDP1-202ENST00000562602 CDC42SE2Q9NRR3 84 aa5.36□□□□□ -1.55
CFDP1-202ENST00000562602 MYO9AB2RTY4 2548 aa5.36□□□□□ -1.55
CFDP1-202ENST00000562602 IGHV3-38A0A0C4DH36 116 aa5.35□□□□□ -1.55
CFDP1-202ENST00000562602 DNAJC9-AS1A6NH13 148 aa5.35□□□□□ -1.55
CFDP1-202ENST00000562602 TRACP01848 142 aa5.35□□□□□ -1.55
CFDP1-202ENST00000562602 NTN5Q8WTR8 489 aaPredicted RBP5.35□□□□□ -1.55
CFDP1-202ENST00000562602 Q9H8V8 135 aa5.35□□□□□ -1.55
CFDP1-202ENST00000562602 PDZD2O15018 2839 aa5.35□□□□□ -1.55
CFDP1-202ENST00000562602 NOTCH2Q04721 2471 aa5.34□□□□□ -1.55
CFDP1-202ENST00000562602 TRGV2A0A075B6R0 118 aa5.34□□□□□ -1.55
CFDP1-202ENST00000562602 SMIM1B2RUZ4 78 aa5.34□□□□□ -1.55
CFDP1-202ENST00000562602 COX7A2LO14548 114 aa5.34□□□□□ -1.55
CFDP1-202ENST00000562602 XGP55808 180 aa5.34□□□□□ -1.55
CFDP1-202ENST00000562602 GAGE2BQ13066 116 aa5.34□□□□□ -1.55
CFDP1-202ENST00000562602 GAGE2EQ4V326 116 aa5.34□□□□□ -1.55
CFDP1-202ENST00000562602 RNASE13Q5GAN3 156 aaKnown RBP5.34□□□□□ -1.55
CFDP1-202ENST00000562602 MEIG1Q5JSS6 88 aa5.34□□□□□ -1.55
CFDP1-202ENST00000562602 PRIMA1Q86XR5 153 aa5.34□□□□□ -1.55
CFDP1-202ENST00000562602 ZNF625Q96I27 306 aaPredicted RBP5.34□□□□□ -1.55
CFDP1-202ENST00000562602 GAGE2DQ9UEU5 116 aa5.34□□□□□ -1.55
CFDP1-202ENST00000562602 NDUFA7O95182 113 aa5.33□□□□□ -1.56
CFDP1-202ENST00000562602 IGLV1-51P01701 117 aa5.33□□□□□ -1.56
CFDP1-202ENST00000562602 MT-ATP8P03928 68 aa5.33□□□□□ -1.56
CFDP1-202ENST00000562602 Q6ZTI0 123 aa5.33□□□□□ -1.56
CFDP1-202ENST00000562602 LINC01561Q8N1V8 128 aa5.33□□□□□ -1.56
CFDP1-202ENST00000562602 CSPG4Q6UVK1 2322 aa5.32□□□□□ -1.56
CFDP1-202ENST00000562602 TRAV13-1A0A0B4J241 112 aa5.32□□□□□ -1.56
CFDP1-202ENST00000562602 TRGV4A0A0C4DH28 118 aa5.32□□□□□ -1.56
CFDP1-202ENST00000562602 GAGE12JA6NER3 117 aa5.32□□□□□ -1.56
CFDP1-202ENST00000562602 SMIM9A6NGZ8 99 aa5.32□□□□□ -1.56
CFDP1-202ENST00000562602 F5H768 121 aa5.32□□□□□ -1.56
CFDP1-202ENST00000562602 KRTAP10-9P60411 292 aa5.32□□□□□ -1.56
CFDP1-202ENST00000562602 COX6A2Q02221 97 aa5.32□□□□□ -1.56
CFDP1-202ENST00000562602 GAGE4Q13068 117 aa5.32□□□□□ -1.56
CFDP1-202ENST00000562602 GAGE5Q13069 117 aa5.32□□□□□ -1.56
CFDP1-202ENST00000562602 TTC32Q5I0X7 151 aa5.32□□□□□ -1.56
CFDP1-202ENST00000562602 LINC00482Q8N8I6 264 aa5.32□□□□□ -1.56
CFDP1-202ENST00000562602 CITED1Q99966 193 aa5.32□□□□□ -1.56
CFDP1-202ENST00000562602 NOP10Q9NPE3 64 aaKnown RBP5.32□□□□□ -1.56
CFDP1-202ENST00000562602 ABCA12Q86UK0 2595 aa5.31□□□□□ -1.56
CFDP1-202ENST00000562602 IBA57-AS1B1ANH7 110 aa5.31□□□□□ -1.56
CFDP1-202ENST00000562602 H0YGX0 51 aa5.31□□□□□ -1.56
CFDP1-202ENST00000562602 PRM2P04554 102 aa5.31□□□□□ -1.56
CFDP1-202ENST00000562602 INAFM2P0DMQ5 153 aa5.31□□□□□ -1.56
CFDP1-202ENST00000562602 HIST2H2BDQ6DRA6 164 aa5.31□□□□□ -1.56
CFDP1-202ENST00000562602 NTM-AS1Q6ZSK4 140 aa5.31□□□□□ -1.56
CFDP1-202ENST00000562602 C11orf44Q8N8P7 122 aa5.31□□□□□ -1.56
CFDP1-202ENST00000562602 KIR2DL5BQ8NHK3 375 aa5.31□□□□□ -1.56
CFDP1-202ENST00000562602 COX7B2Q8TF08 81 aa5.31□□□□□ -1.56
CFDP1-202ENST00000562602 CITED2Q99967 270 aaPredicted RBP5.31□□□□□ -1.56
CFDP1-202ENST00000562602 ANAPC13Q9BS18 74 aa5.31□□□□□ -1.56
CFDP1-202ENST00000562602 IMUPQ9GZP8 106 aa5.31□□□□□ -1.56
CFDP1-202ENST00000562602 Q9UF83 564 aa5.31□□□□□ -1.56
CFDP1-202ENST00000562602 SPG11Q96JI7 2443 aa5.31□□□□□ -1.56
CFDP1-202ENST00000562602 NF1P21359 2839 aa5.3□□□□□ -1.56
CFDP1-202ENST00000562602 TRBV6-8A0A0A6YYG3 113 aa5.3□□□□□ -1.56
CFDP1-202ENST00000562602 TEX49A0A1B0GTD5 131 aa5.3□□□□□ -1.56
CFDP1-202ENST00000562602 CRPP02741 224 aa5.3□□□□□ -1.56
CFDP1-202ENST00000562602 LINC00694P0DN24 101 aa5.3□□□□□ -1.56
CFDP1-202ENST00000562602 RPL28P46779 137 aaKnown RBP5.3□□□□□ -1.56
CFDP1-202ENST00000562602 LINC01006Q8NI28 216 aa5.3□□□□□ -1.56
CFDP1-202ENST00000562602 KRTAP3-1Q9BYR8 98 aa5.3□□□□□ -1.56
CFDP1-202ENST00000562602 CREBBPQ92793 2442 aa5.3□□□□□ -1.56
CFDP1-202ENST00000562602 A0A087WZ39 114 aa5.29□□□□□ -1.56
CFDP1-202ENST00000562602 A0A1B0GUV1 79 aa5.29□□□□□ -1.56
CFDP1-202ENST00000562602 A0A1W2PRX2 142 aa5.29□□□□□ -1.56
CFDP1-202ENST00000562602 A8MZ25 164 aa5.29□□□□□ -1.56
CFDP1-202ENST00000562602 GAGE7O76087 117 aa5.29□□□□□ -1.56
CFDP1-202ENST00000562602 GIG44P09565 113 aaPredicted RBP5.29□□□□□ -1.56
CFDP1-202ENST00000562602 GAGE12FP0CL80 117 aa5.29□□□□□ -1.56
CFDP1-202ENST00000562602 GAGE12GP0CL81 117 aa5.29□□□□□ -1.56
CFDP1-202ENST00000562602 GAGE12IP0CL82 117 aa5.29□□□□□ -1.56
CFDP1-202ENST00000562602 NPC2P61916 151 aa5.29□□□□□ -1.56
CFDP1-202ENST00000562602 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.29□□□□□ -1.56
CFDP1-202ENST00000562602 CSNK1G2-AS1Q8NCQ2 148 aa5.29□□□□□ -1.56
CFDP1-202ENST00000562602 PLAC8L1A1L4L8 177 aa5.28□□□□□ -1.56
CFDP1-202ENST00000562602 HILS1P60008 231 aa5.28□□□□□ -1.56
CFDP1-202ENST00000562602 FHL2Q14192 279 aa5.28□□□□□ -1.56
CFDP1-202ENST00000562602 SS18Q15532 418 aa5.28□□□□□ -1.56
CFDP1-202ENST00000562602 LINC00612Q8N6U2 182 aa5.28□□□□□ -1.56
CFDP1-202ENST00000562602 DAND5Q8N907 189 aa5.28□□□□□ -1.56
CFDP1-202ENST00000562602 C15orf53Q8NAA6 179 aa5.28□□□□□ -1.56
CFDP1-202ENST00000562602 MUC7Q8TAX7 377 aa5.28□□□□□ -1.56
CFDP1-202ENST00000562602 CLEC2BQ92478 149 aa5.28□□□□□ -1.56
CFDP1-202ENST00000562602 CHCHD5Q9BSY4 110 aa5.28□□□□□ -1.56
CFDP1-202ENST00000562602 TEP1Q99973 2627 aaKnown RBP5.28□□□□□ -1.56
CFDP1-202ENST00000562602 MAP1AP78559 2803 aaPredicted RBP5.28□□□□□ -1.56
CFDP1-202ENST00000562602 IGHV3OR16-9A0A0B4J2B5 98 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms