RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 LINC00269Q8N2A0 174 aa11.74□□□□□ -0.53
AP4E1-205ENST00000561393 CHCHD7Q9BUK0 85 aa11.74□□□□□ -0.53
AP4E1-205ENST00000561393 UBE2DNLQ8IWF7 75 aa11.73□□□□□ -0.53
AP4E1-205ENST00000561393 DPH3Q96FX2 82 aa11.72□□□□□ -0.53
AP4E1-205ENST00000561393 GTSF1LQ9H1H1 148 aa11.72□□□□□ -0.53
AP4E1-205ENST00000561393 CR1P17927 2039 aa11.72□□□□□ -0.53
AP4E1-205ENST00000561393 MIFP14174 115 aa11.72□□□□□ -0.53
AP4E1-205ENST00000561393 TEX48A0A1B0GUV7 120 aa11.72□□□□□ -0.53
AP4E1-205ENST00000561393 POM121L12Q8N7R1 296 aa11.72□□□□□ -0.53
AP4E1-205ENST00000561393 SLC25A20O43772 301 aa11.71□□□□□ -0.53
AP4E1-205ENST00000561393 MIR7-3HGQ8N6C7 128 aa11.71□□□□□ -0.53
AP4E1-205ENST00000561393 SETXQ7Z333 2677 aaKnown RBP11.71□□□□□ -0.53
AP4E1-205ENST00000561393 IGKV2D-24A0A075B6R9 120 aa11.71□□□□□ -0.53
AP4E1-205ENST00000561393 PRB2P02812 416 aaPredicted RBP11.71□□□□□ -0.53
AP4E1-205ENST00000561393 SHISA2Q6UWI4 295 aa11.71□□□□□ -0.53
AP4E1-205ENST00000561393 SND1-IT1Q9HBX3 110 aa11.71□□□□□ -0.53
AP4E1-205ENST00000561393 TSPEAR-AS2P59090 65 aa11.71□□□□□ -0.54
AP4E1-205ENST00000561393 MRPS36P82909 103 aaKnown RBP11.7□□□□□ -0.54
AP4E1-205ENST00000561393 KIR2DL5BQ8NHK3 375 aa11.7□□□□□ -0.54
AP4E1-205ENST00000561393 LINC01546A6NGU7 62 aa11.7□□□□□ -0.54
AP4E1-205ENST00000561393 TSPAN13O95857 204 aa11.7□□□□□ -0.54
AP4E1-205ENST00000561393 TIRAPP58753 221 aa11.7□□□□□ -0.54
AP4E1-205ENST00000561393 UBE2D1P51668 147 aa11.7□□□□□ -0.54
AP4E1-205ENST00000561393 UBR5O95071 2799 aaPredicted RBP11.69□□□□□ -0.54
AP4E1-205ENST00000561393 MIAQ16674 131 aa11.69□□□□□ -0.54
AP4E1-205ENST00000561393 CLUHP3Q96NS8 147 aa11.69□□□□□ -0.54
AP4E1-205ENST00000561393 CDC42SE2Q9NRR3 84 aa11.68□□□□□ -0.54
AP4E1-205ENST00000561393 TRAV13-2A0A0B4J235 113 aa11.68□□□□□ -0.54
AP4E1-205ENST00000561393 KRTAP1-1Q07627 177 aa11.68□□□□□ -0.54
AP4E1-205ENST00000561393 ZNF575Q86XF7 245 aa11.68□□□□□ -0.54
AP4E1-205ENST00000561393 LINC00242Q5T6M2 205 aa11.68□□□□□ -0.54
AP4E1-205ENST00000561393 SIGMAR1Q99720 223 aa11.68□□□□□ -0.54
AP4E1-205ENST00000561393 FHL2Q14192 279 aa11.67□□□□□ -0.54
AP4E1-205ENST00000561393 REG3AQ06141 175 aa11.67□□□□□ -0.54
AP4E1-205ENST00000561393 C1orf43Q9BWL3 253 aa11.67□□□□□ -0.54
AP4E1-205ENST00000561393 APCP25054 2843 aa11.66□□□□□ -0.54
AP4E1-205ENST00000561393 CELSR2Q9HCU4 2923 aa11.66□□□□□ -0.54
AP4E1-205ENST00000561393 TRAV8-4A0A0B4J246 113 aa11.66□□□□□ -0.54
AP4E1-205ENST00000561393 NTN5Q8WTR8 489 aaPredicted RBP11.66□□□□□ -0.54
AP4E1-205ENST00000561393 CARD19Q96LW7 228 aa11.66□□□□□ -0.54
AP4E1-205ENST00000561393 SPANXB1Q9NS25 103 aaPredicted RBP11.66□□□□□ -0.54
AP4E1-205ENST00000561393 C11orf45Q8TAV5 145 aa11.66□□□□□ -0.54
AP4E1-205ENST00000561393 EDA2RQ9HAV5 297 aa11.66□□□□□ -0.54
AP4E1-205ENST00000561393 ZFAND6Q6FIF0 208 aa11.65□□□□□ -0.54
AP4E1-205ENST00000561393 RETNQ9HD89 108 aa11.65□□□□□ -0.54
AP4E1-205ENST00000561393 PPDPFLQ8WWR9 84 aa11.65□□□□□ -0.54
AP4E1-205ENST00000561393 PTH2Q96A98 100 aa11.65□□□□□ -0.54
AP4E1-205ENST00000561393 AMELXQ99217 191 aa11.65□□□□□ -0.54
AP4E1-205ENST00000561393 PSCAO43653 123 aa11.65□□□□□ -0.54
AP4E1-205ENST00000561393 H7C423 109 aa11.64□□□□□ -0.55
AP4E1-205ENST00000561393 IGLV4-60A0A075B6I1 120 aa11.64□□□□□ -0.55
AP4E1-205ENST00000561393 COX6A2Q02221 97 aa11.64□□□□□ -0.55
AP4E1-205ENST00000561393 SPAG11BQ08648 103 aa11.64□□□□□ -0.55
AP4E1-205ENST00000561393 CHCHD10Q8WYQ3 142 aaPredicted RBP11.64□□□□□ -0.55
AP4E1-205ENST00000561393 CLEC2BQ92478 149 aa11.64□□□□□ -0.55
AP4E1-205ENST00000561393 GAGE12HA6NDE8 117 aa11.63□□□□□ -0.55
AP4E1-205ENST00000561393 NDUFA1O15239 70 aa11.62□□□□□ -0.55
AP4E1-205ENST00000561393 TCL1BO95988 128 aa11.62□□□□□ -0.55
AP4E1-205ENST00000561393 SMG1Q96Q15 3661 aaKnown RBP11.62□□□□□ -0.55
AP4E1-205ENST00000561393 DEFB131BA0A096LNP1 70 aa11.62□□□□□ -0.55
AP4E1-205ENST00000561393 LINC01620Q4KN68 170 aa11.62□□□□□ -0.55
AP4E1-205ENST00000561393 CAMK2N2Q96S95 79 aa11.62□□□□□ -0.55
AP4E1-205ENST00000561393 OVOL2Q9BRP0 275 aa11.62□□□□□ -0.55
AP4E1-205ENST00000561393 LINC00308Q8TCZ7 52 aa11.61□□□□□ -0.55
AP4E1-205ENST00000561393 TTC32Q5I0X7 151 aa11.61□□□□□ -0.55
AP4E1-205ENST00000561393 LINC00959A0A1B0GUT2 108 aa11.6□□□□□ -0.55
AP4E1-205ENST00000561393 A0A0B4J2C4 111 aa11.6□□□□□ -0.55
AP4E1-205ENST00000561393 NTM-AS1Q6ZSK4 140 aa11.6□□□□□ -0.55
AP4E1-205ENST00000561393 CCL18P55774 89 aa11.59□□□□□ -0.55
AP4E1-205ENST00000561393 LINC00526Q96FQ7 95 aa11.59□□□□□ -0.55
AP4E1-205ENST00000561393 ANKRD29Q8N6D5 301 aa11.59□□□□□ -0.55
AP4E1-205ENST00000561393 KPRPQ5T749 579 aaPredicted RBP11.58□□□□□ -0.56
AP4E1-205ENST00000561393 SMIM1B2RUZ4 78 aa11.58□□□□□ -0.56
AP4E1-205ENST00000561393 COL6A5A8TX70 2615 aa11.57□□□□□ -0.56
AP4E1-205ENST00000561393 A8MTW9 85 aa11.57□□□□□ -0.56
AP4E1-205ENST00000561393 GAGE2EQ4V326 116 aa11.57□□□□□ -0.56
AP4E1-205ENST00000561393 HIGD2BQ4VC39 106 aa11.57□□□□□ -0.56
AP4E1-205ENST00000561393 GAGE2DQ9UEU5 116 aa11.57□□□□□ -0.56
AP4E1-205ENST00000561393 LAMTOR3Q9UHA4 124 aa11.57□□□□□ -0.56
AP4E1-205ENST00000561393 NBEAL2Q6ZNJ1 2754 aa11.56□□□□□ -0.56
AP4E1-205ENST00000561393 NF1P21359 2839 aa11.56□□□□□ -0.56
AP4E1-205ENST00000561393 KRTAP10-3P60369 221 aa11.56□□□□□ -0.56
AP4E1-205ENST00000561393 TEN1Q86WV5 123 aa11.56□□□□□ -0.56
AP4E1-205ENST00000561393 GAGE2AQ6NT46 116 aa11.55□□□□□ -0.56
AP4E1-205ENST00000561393 ADAMTSL4-AS1Q5T5F5 129 aa11.55□□□□□ -0.56
AP4E1-205ENST00000561393 BAALC-AS2P0C853 105 aa11.55□□□□□ -0.56
AP4E1-205ENST00000561393 CSDC2Q9Y534 153 aaKnown RBP11.55□□□□□ -0.56
AP4E1-205ENST00000561393 TRIAP1O43715 76 aa11.54□□□□□ -0.56
AP4E1-205ENST00000561393 NANOS2P60321 138 aaKnown RBP11.54□□□□□ -0.56
AP4E1-205ENST00000561393 NOTCH1P46531 2555 aa11.54□□□□□ -0.56
AP4E1-205ENST00000561393 SPANXCQ9NY87 97 aa11.54□□□□□ -0.56
AP4E1-205ENST00000561393 STAB1Q9NY15 2570 aa11.54□□□□□ -0.56
AP4E1-205ENST00000561393 A0A0J9YWU9 116 aa11.54□□□□□ -0.56
AP4E1-205ENST00000561393 RNF183Q96D59 192 aa11.54□□□□□ -0.56
AP4E1-205ENST00000561393 CXCL5P42830 114 aa11.53□□□□□ -0.56
AP4E1-205ENST00000561393 NCR3O14931 201 aa11.53□□□□□ -0.56
AP4E1-205ENST00000561393 LELP1Q5T871 98 aa11.53□□□□□ -0.56
AP4E1-205ENST00000561393 CELA1Q9UNI1 258 aa11.53□□□□□ -0.56
AP4E1-205ENST00000561393 X6R8D5 127 aa11.52□□□□□ -0.56
AP4E1-205ENST00000561393 KRTAP24-1Q3LI83 254 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms