RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 IGHV3-33P01772 117 aa8□□□□□ -1.13
LDLR-212ENST00000560467 IGHV3-30-3P0DP02 117 aa8□□□□□ -1.13
LDLR-212ENST00000560467 IGHV3-30-5P0DP03 117 aa8□□□□□ -1.13
LDLR-212ENST00000560467 CTAG1AP78358 180 aa8□□□□□ -1.13
LDLR-212ENST00000560467 LINC01556Q5JQF7 62 aa8□□□□□ -1.13
LDLR-212ENST00000560467 Q6ZUT4 128 aa8□□□□□ -1.13
LDLR-212ENST00000560467 Q8N976 141 aa8□□□□□ -1.13
LDLR-212ENST00000560467 AMELXQ99217 191 aa8□□□□□ -1.13
LDLR-212ENST00000560467 UPK3BQ9BT76 320 aa8□□□□□ -1.13
LDLR-212ENST00000560467 LINC00588Q9Y4M8 146 aa8□□□□□ -1.13
LDLR-212ENST00000560467 PCP4L1A6NKN8 68 aa7.99□□□□□ -1.13
LDLR-212ENST00000560467 H3BRM9 83 aa7.99□□□□□ -1.13
LDLR-212ENST00000560467 IGKCP01834 107 aa7.99□□□□□ -1.13
LDLR-212ENST00000560467 HERVK_113P61574 105 aa7.99□□□□□ -1.13
LDLR-212ENST00000560467 HERVK_113P63121 156 aa7.99□□□□□ -1.13
LDLR-212ENST00000560467 LINC01545Q5VT33 79 aa7.99□□□□□ -1.13
LDLR-212ENST00000560467 WFDC10BQ8IUB3 73 aa7.99□□□□□ -1.13
LDLR-212ENST00000560467 LINC00269Q8N2A0 174 aa7.99□□□□□ -1.13
LDLR-212ENST00000560467 Q9H8V8 135 aa7.99□□□□□ -1.13
LDLR-212ENST00000560467 KLK12Q9UKR0 248 aa7.99□□□□□ -1.13
LDLR-212ENST00000560467 DMBT1Q9UGM3 2413 aaPredicted RBP7.98□□□□□ -1.13
LDLR-212ENST00000560467 IGLV4-60A0A075B6I1 120 aa7.98□□□□□ -1.13
LDLR-212ENST00000560467 TRAV8-4A0A0B4J246 113 aa7.98□□□□□ -1.13
LDLR-212ENST00000560467 DNAH10OSP0CZ25 163 aa7.98□□□□□ -1.13
LDLR-212ENST00000560467 REG3AQ06141 175 aa7.98□□□□□ -1.13
LDLR-212ENST00000560467 ODF1Q14990 250 aa7.98□□□□□ -1.13
LDLR-212ENST00000560467 RNASE13Q5GAN3 156 aaKnown RBP7.98□□□□□ -1.13
LDLR-212ENST00000560467 RMI2Q96E14 147 aa7.98□□□□□ -1.13
LDLR-212ENST00000560467 KRTAP1-5Q9BYS1 174 aa7.98□□□□□ -1.13
LDLR-212ENST00000560467 MRPL35Q9NZE8 188 aaKnown RBP7.98□□□□□ -1.13
LDLR-212ENST00000560467 TRAV8-3A0A0A6YYJ7 113 aa7.97□□□□□ -1.13
LDLR-212ENST00000560467 TINCRA0A1B0GVN0 87 aa7.97□□□□□ -1.13
LDLR-212ENST00000560467 KRTAP10-2P60368 255 aa7.97□□□□□ -1.13
LDLR-212ENST00000560467 TMEM170BQ5T4T1 132 aa7.97□□□□□ -1.13
LDLR-212ENST00000560467 TSTD3H0UI37 97 aa7.96□□□□□ -1.14
LDLR-212ENST00000560467 UBE2D1P51668 147 aa7.96□□□□□ -1.14
LDLR-212ENST00000560467 MIAQ16674 131 aa7.96□□□□□ -1.14
LDLR-212ENST00000560467 TTC32Q5I0X7 151 aa7.96□□□□□ -1.14
LDLR-212ENST00000560467 UBE2WQ96B02 151 aa7.96□□□□□ -1.14
LDLR-212ENST00000560467 PMCHL2Q9BQD1 86 aa7.96□□□□□ -1.14
LDLR-212ENST00000560467 CHAC1Q9BUX1 264 aa7.96□□□□□ -1.14
LDLR-212ENST00000560467 VAMP8Q9BV40 100 aa7.96□□□□□ -1.14
LDLR-212ENST00000560467 A0A0J9YXV3 536 aa7.95□□□□□ -1.14
LDLR-212ENST00000560467 LINC00959A0A1B0GUT2 108 aa7.95□□□□□ -1.14
LDLR-212ENST00000560467 IGLC3P0DOY3 106 aa7.95□□□□□ -1.14
LDLR-212ENST00000560467 PYY3Q5JQD4 70 aa7.95□□□□□ -1.14
LDLR-212ENST00000560467 ZC2HC1BQ5TFG8 222 aa7.95□□□□□ -1.14
LDLR-212ENST00000560467 LINC00469Q8N7U9 141 aa7.95□□□□□ -1.14
LDLR-212ENST00000560467 LBHQ53QV2 105 aaPredicted RBP7.94□□□□□ -1.14
LDLR-212ENST00000560467 CLPSL2Q6UWE3 100 aa7.94□□□□□ -1.14
LDLR-212ENST00000560467 NFE4Q86UQ8 179 aa7.94□□□□□ -1.14
LDLR-212ENST00000560467 C1orf43Q9BWL3 253 aa7.94□□□□□ -1.14
LDLR-212ENST00000560467 COX11Q9Y6N1 276 aa7.94□□□□□ -1.14
LDLR-212ENST00000560467 FAT1Q14517 4588 aa7.93□□□□□ -1.14
LDLR-212ENST00000560467 MALP21145 153 aa7.93□□□□□ -1.14
LDLR-212ENST00000560467 XCL1P47992 114 aa7.93□□□□□ -1.14
LDLR-212ENST00000560467 LINC00242Q5T6M2 205 aa7.93□□□□□ -1.14
LDLR-212ENST00000560467 ATOH7Q8N100 152 aa7.93□□□□□ -1.14
LDLR-212ENST00000560467 TM2D2Q9BX73 214 aa7.93□□□□□ -1.14
LDLR-212ENST00000560467 PRR34Q9NV39 138 aa7.93□□□□□ -1.14
LDLR-212ENST00000560467 IBA57-AS1B1ANH7 110 aa7.92□□□□□ -1.14
LDLR-212ENST00000560467 CD164L2Q6UWJ8 174 aa7.92□□□□□ -1.14
LDLR-212ENST00000560467 FAM19A3Q7Z5A8 133 aa7.92□□□□□ -1.14
LDLR-212ENST00000560467 CHCHD10Q8WYQ3 142 aaPredicted RBP7.92□□□□□ -1.14
LDLR-212ENST00000560467 C11orf86A6NJI1 115 aa7.91□□□□□ -1.14
LDLR-212ENST00000560467 COX7A2LO14548 114 aa7.91□□□□□ -1.14
LDLR-212ENST00000560467 APOMO95445 188 aa7.91□□□□□ -1.14
LDLR-212ENST00000560467 FUSP35637 526 aaKnown RBP eCLIP7.91□□□□□ -1.14
LDLR-212ENST00000560467 FAM104AQ969W3 186 aa7.91□□□□□ -1.14
LDLR-212ENST00000560467 IGLV4-69A0A075B6H9 119 aa7.9□□□□□ -1.14
LDLR-212ENST00000560467 IGLV10-54A0A075B6I4 117 aa7.9□□□□□ -1.14
LDLR-212ENST00000560467 IGKV2D-24A0A075B6R9 120 aa7.9□□□□□ -1.14
LDLR-212ENST00000560467 EPM2AB3EWF7 344 aa7.9□□□□□ -1.14
LDLR-212ENST00000560467 CFAP161Q6P656 301 aa7.9□□□□□ -1.14
LDLR-212ENST00000560467 ENHOQ6UWT2 76 aa7.9□□□□□ -1.14
LDLR-212ENST00000560467 Q8N3U1 123 aa7.9□□□□□ -1.14
LDLR-212ENST00000560467 Q9HAA7 133 aa7.9□□□□□ -1.14
LDLR-212ENST00000560467 PAM16Q9Y3D7 125 aa7.9□□□□□ -1.14
LDLR-212ENST00000560467 GAGE12HA6NDE8 117 aa7.89□□□□□ -1.15
LDLR-212ENST00000560467 PRSS2P07478 247 aa7.89□□□□□ -1.15
LDLR-212ENST00000560467 ZNF22P17026 224 aaPredicted RBP7.89□□□□□ -1.15
LDLR-212ENST00000560467 LINC01561Q8N1V8 128 aa7.89□□□□□ -1.15
LDLR-212ENST00000560467 STPG4Q8N801 248 aa7.89□□□□□ -1.15
LDLR-212ENST00000560467 PLEKHB2Q96CS7 222 aa7.89□□□□□ -1.15
LDLR-212ENST00000560467 CDKN2A-AS1Q9UH64 79 aa7.89□□□□□ -1.15
LDLR-212ENST00000560467 MYCBP2O75592 4640 aa7.89□□□□□ -1.15
LDLR-212ENST00000560467 hDV102S1A0JD36 115 aa7.88□□□□□ -1.15
LDLR-212ENST00000560467 PSCAO43653 123 aa7.88□□□□□ -1.15
LDLR-212ENST00000560467 LGALS3P17931 250 aaKnown RBP7.88□□□□□ -1.15
LDLR-212ENST00000560467 SPATA45Q537H7 98 aa7.88□□□□□ -1.15
LDLR-212ENST00000560467 FLG2Q5D862 2391 aaPredicted RBP7.87□□□□□ -1.15
LDLR-212ENST00000560467 IGLV5-45A0A087WSX0 123 aa7.87□□□□□ -1.15
LDLR-212ENST00000560467 A0A087WZ39 114 aa7.87□□□□□ -1.15
LDLR-212ENST00000560467 IGHV3OR16-9A0A0B4J2B5 98 aa7.87□□□□□ -1.15
LDLR-212ENST00000560467 TMEM223A0PJW6 202 aa7.87□□□□□ -1.15
LDLR-212ENST00000560467 LINC00587B1AMM8 73 aa7.87□□□□□ -1.15
LDLR-212ENST00000560467 E9PLD3 99 aa7.87□□□□□ -1.15
LDLR-212ENST00000560467 INAFM2P0DMQ5 153 aa7.87□□□□□ -1.15
LDLR-212ENST00000560467 NMUP48645 174 aa7.87□□□□□ -1.15
LDLR-212ENST00000560467 C5orf38Q86SI9 138 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms