RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 CCDC179H3BU77 68 aa9.95□□□□□ -0.82
CARMIL3-203ENST00000560349 TCL1BO95988 128 aa9.95□□□□□ -0.82
CARMIL3-203ENST00000560349 LGALS3P17931 250 aaKnown RBP9.94□□□□□ -0.82
CARMIL3-203ENST00000560349 FAM222AQ5U5X8 452 aa9.94□□□□□ -0.82
CARMIL3-203ENST00000560349 TRBV10-1A0A0K0K1A3 114 aa9.94□□□□□ -0.82
CARMIL3-203ENST00000560349 SPANXA1Q9NS26 97 aa9.94□□□□□ -0.82
CARMIL3-203ENST00000560349 TRAV13-1A0A0B4J241 112 aa9.93□□□□□ -0.82
CARMIL3-203ENST00000560349 EIF4EBP3O60516 100 aaPredicted RBP9.93□□□□□ -0.82
CARMIL3-203ENST00000560349 C10orf126Q8N4M7 172 aa9.93□□□□□ -0.82
CARMIL3-203ENST00000560349 IGKV3OR2-268A0A0C4DH90 116 aa9.93□□□□□ -0.82
CARMIL3-203ENST00000560349 IGHV4-30-4P0DP06 118 aa9.93□□□□□ -0.82
CARMIL3-203ENST00000560349 LEPROTO15243 131 aa9.92□□□□□ -0.82
CARMIL3-203ENST00000560349 COX6A2Q02221 97 aa9.92□□□□□ -0.82
CARMIL3-203ENST00000560349 DAZ4Q86SG3 579 aaKnown RBP9.92□□□□□ -0.82
CARMIL3-203ENST00000560349 ATP6V0E2Q8NHE4 81 aa9.92□□□□□ -0.82
CARMIL3-203ENST00000560349 DAZ3Q9NR90 486 aaKnown RBP9.92□□□□□ -0.82
CARMIL3-203ENST00000560349 PRO1854Q9UHT4 67 aa9.92□□□□□ -0.82
CARMIL3-203ENST00000560349 IGHV4-28A0A0C4DH34 117 aa9.91□□□□□ -0.82
CARMIL3-203ENST00000560349 A4D1N5 150 aa9.91□□□□□ -0.82
CARMIL3-203ENST00000560349 MRPS36P82909 103 aaKnown RBP9.91□□□□□ -0.82
CARMIL3-203ENST00000560349 CELA1Q9UNI1 258 aa9.91□□□□□ -0.82
CARMIL3-203ENST00000560349 TRBV6-4A0A1B0GX49 114 aa9.91□□□□□ -0.82
CARMIL3-203ENST00000560349 WFDC9Q8NEX5 89 aa9.91□□□□□ -0.82
CARMIL3-203ENST00000560349 CARD19Q96LW7 228 aa9.91□□□□□ -0.82
CARMIL3-203ENST00000560349 CDKN2A-AS1Q9UH64 79 aa9.91□□□□□ -0.82
CARMIL3-203ENST00000560349 IGHV3-30-3P0DP02 117 aa9.9□□□□□ -0.82
CARMIL3-203ENST00000560349 ZFAND6Q6FIF0 208 aa9.9□□□□□ -0.82
CARMIL3-203ENST00000560349 C3orf56Q8N813 242 aa9.9□□□□□ -0.82
CARMIL3-203ENST00000560349 TIMM21Q9BVV7 248 aa9.9□□□□□ -0.82
CARMIL3-203ENST00000560349 GYPEP15421 78 aa9.9□□□□□ -0.82
CARMIL3-203ENST00000560349 PRIMA1Q86XR5 153 aa9.9□□□□□ -0.82
CARMIL3-203ENST00000560349 TRBV20-1A0A075B6N2 111 aa9.89□□□□□ -0.83
CARMIL3-203ENST00000560349 UBE2L6O14933 153 aa9.89□□□□□ -0.83
CARMIL3-203ENST00000560349 KRTAP10-11P60412 298 aa9.89□□□□□ -0.83
CARMIL3-203ENST00000560349 MUSTN1Q8IVN3 82 aa9.89□□□□□ -0.83
CARMIL3-203ENST00000560349 SCGB1C2P0DMR2 95 aa9.89□□□□□ -0.83
CARMIL3-203ENST00000560349 LYRM7Q5U5X0 104 aa9.89□□□□□ -0.83
CARMIL3-203ENST00000560349 RETNQ9HD89 108 aa9.89□□□□□ -0.83
CARMIL3-203ENST00000560349 HTN3P15516 51 aa9.89□□□□□ -0.83
CARMIL3-203ENST00000560349 APOC4P55056 127 aa9.89□□□□□ -0.83
CARMIL3-203ENST00000560349 SBSPONQ8IVN8 264 aa9.89□□□□□ -0.83
CARMIL3-203ENST00000560349 TMEM243Q9BU79 118 aa9.89□□□□□ -0.83
CARMIL3-203ENST00000560349 MGAM2Q2M2H8 2515 aa9.88□□□□□ -0.83
CARMIL3-203ENST00000560349 IGHV3-33P01772 117 aa9.88□□□□□ -0.83
CARMIL3-203ENST00000560349 TEN1Q86WV5 123 aa9.88□□□□□ -0.83
CARMIL3-203ENST00000560349 KIR2DL5BQ8NHK3 375 aa9.88□□□□□ -0.83
CARMIL3-203ENST00000560349 CHCHD5Q9BSY4 110 aa9.88□□□□□ -0.83
CARMIL3-203ENST00000560349 IGLV4-60A0A075B6I1 120 aa9.87□□□□□ -0.83
CARMIL3-203ENST00000560349 TINCRA0A1B0GVN0 87 aa9.87□□□□□ -0.83
CARMIL3-203ENST00000560349 LINC00242Q5T6M2 205 aa9.87□□□□□ -0.83
CARMIL3-203ENST00000560349 A0A0J9YXY3 114 aa9.86□□□□□ -0.83
CARMIL3-203ENST00000560349 CDC42SE2Q9NRR3 84 aa9.86□□□□□ -0.83
CARMIL3-203ENST00000560349 H7C2G1 150 aa9.86□□□□□ -0.83
CARMIL3-203ENST00000560349 NPC2P61916 151 aa9.86□□□□□ -0.83
CARMIL3-203ENST00000560349 C5orf47Q569G3 176 aa9.86□□□□□ -0.83
CARMIL3-203ENST00000560349 PPDPFLQ8WWR9 84 aa9.86□□□□□ -0.83
CARMIL3-203ENST00000560349 CSDC2Q9Y534 153 aaKnown RBP9.86□□□□□ -0.83
CARMIL3-203ENST00000560349 TRBV6-8A0A0A6YYG3 113 aa9.85□□□□□ -0.83
CARMIL3-203ENST00000560349 NDUFV3P56181 108 aaKnown RBP9.85□□□□□ -0.83
CARMIL3-203ENST00000560349 LINC00612Q8N6U2 182 aa9.85□□□□□ -0.83
CARMIL3-203ENST00000560349 Q8NAQ8 132 aa9.85□□□□□ -0.83
CARMIL3-203ENST00000560349 A0A0B4J2C4 111 aa9.84□□□□□ -0.83
CARMIL3-203ENST00000560349 IGHV1-58A0A0C4DH39 117 aa9.84□□□□□ -0.83
CARMIL3-203ENST00000560349 DAD1P61803 113 aa9.84□□□□□ -0.83
CARMIL3-203ENST00000560349 CLPSL2Q6UWE3 100 aa9.84□□□□□ -0.83
CARMIL3-203ENST00000560349 ANKRD29Q8N6D5 301 aa9.84□□□□□ -0.83
CARMIL3-203ENST00000560349 ZNF625Q96I27 306 aaPredicted RBP9.84□□□□□ -0.83
CARMIL3-203ENST00000560349 VSIG2Q96IQ7 327 aa9.84□□□□□ -0.83
CARMIL3-203ENST00000560349 LITAFQ99732 161 aa9.84□□□□□ -0.83
CARMIL3-203ENST00000560349 SMIM9A6NGZ8 99 aa9.84□□□□□ -0.83
CARMIL3-203ENST00000560349 PRB2P02812 416 aaPredicted RBP9.84□□□□□ -0.83
CARMIL3-203ENST00000560349 Q8N3U1 123 aa9.84□□□□□ -0.83
CARMIL3-203ENST00000560349 A0A0U1RRA0 63 aa9.83□□□□□ -0.84
CARMIL3-203ENST00000560349 DAND5Q8N907 189 aa9.83□□□□□ -0.84
CARMIL3-203ENST00000560349 NDUFA12Q9UI09 145 aa9.83□□□□□ -0.84
CARMIL3-203ENST00000560349 PAX4O43316 350 aa9.83□□□□□ -0.84
CARMIL3-203ENST00000560349 TMEM101Q96IK0 257 aa9.83□□□□□ -0.84
CARMIL3-203ENST00000560349 TMEM262E9PQX1 116 aa9.82□□□□□ -0.84
CARMIL3-203ENST00000560349 ADAMTSL4-AS1Q5T5F5 129 aa9.82□□□□□ -0.84
CARMIL3-203ENST00000560349 PRO0255Q9UI72 69 aa9.82□□□□□ -0.84
CARMIL3-203ENST00000560349 C9JAW5 83 aa9.82□□□□□ -0.84
CARMIL3-203ENST00000560349 F5H768 121 aa9.82□□□□□ -0.84
CARMIL3-203ENST00000560349 SLC25A20O43772 301 aa9.82□□□□□ -0.84
CARMIL3-203ENST00000560349 LYRM9A8MSI8 78 aa9.81□□□□□ -0.84
CARMIL3-203ENST00000560349 WIPF1O43516 503 aa9.81□□□□□ -0.84
CARMIL3-203ENST00000560349 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.8□□□□□ -0.84
CARMIL3-203ENST00000560349 PRSS2P07478 247 aa9.8□□□□□ -0.84
CARMIL3-203ENST00000560349 DNAH3Q8TD57 4116 aa9.8□□□□□ -0.84
CARMIL3-203ENST00000560349 Q1RN00 199 aa9.79□□□□□ -0.84
CARMIL3-203ENST00000560349 SMIM1B2RUZ4 78 aa9.79□□□□□ -0.84
CARMIL3-203ENST00000560349 HERVK_113P63121 156 aa9.79□□□□□ -0.84
CARMIL3-203ENST00000560349 MIFP14174 115 aa9.79□□□□□ -0.84
CARMIL3-203ENST00000560349 TIRAPP58753 221 aa9.79□□□□□ -0.84
CARMIL3-203ENST00000560349 GAGE2BQ13066 116 aa9.79□□□□□ -0.84
CARMIL3-203ENST00000560349 GAGE2EQ4V326 116 aa9.79□□□□□ -0.84
CARMIL3-203ENST00000560349 MEIG1Q5JSS6 88 aa9.79□□□□□ -0.84
CARMIL3-203ENST00000560349 GAGE2DQ9UEU5 116 aa9.79□□□□□ -0.84
CARMIL3-203ENST00000560349 IGLV5-45A0A087WSX0 123 aa9.78□□□□□ -0.84
CARMIL3-203ENST00000560349 TRIAP1O43715 76 aa9.78□□□□□ -0.84
CARMIL3-203ENST00000560349 Q9H8V8 135 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms