RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 SOSTDC1Q6X4U4 206 aa7.1□□□□□ -1.27
LRRC28-216ENST00000559819 LINC00308Q8TCZ7 52 aa7.1□□□□□ -1.27
LRRC28-216ENST00000559819 TMEM243Q9BU79 118 aa7.1□□□□□ -1.27
LRRC28-216ENST00000559819 F5H768 121 aa7.1□□□□□ -1.27
LRRC28-216ENST00000559819 XGP55808 180 aa7.1□□□□□ -1.27
LRRC28-216ENST00000559819 KRTAP10-3P60369 221 aa7.1□□□□□ -1.27
LRRC28-216ENST00000559819 FAM19A3Q7Z5A8 133 aa7.1□□□□□ -1.27
LRRC28-216ENST00000559819 CSDC2Q9Y534 153 aaKnown RBP7.1□□□□□ -1.27
LRRC28-216ENST00000559819 TRGV4A0A0C4DH28 118 aa7.09□□□□□ -1.27
LRRC28-216ENST00000559819 SCGB1A1P11684 91 aa7.09□□□□□ -1.27
LRRC28-216ENST00000559819 IFITM1P13164 125 aa7.09□□□□□ -1.27
LRRC28-216ENST00000559819 CMC4P56277 68 aaPredicted RBP7.09□□□□□ -1.27
LRRC28-216ENST00000559819 MEIG1Q5JSS6 88 aa7.09□□□□□ -1.27
LRRC28-216ENST00000559819 PRIMA1Q86XR5 153 aa7.09□□□□□ -1.27
LRRC28-216ENST00000559819 CIRBPQ14011 172 aaKnown RBP7.08□□□□□ -1.28
LRRC28-216ENST00000559819 ITPR2Q14571 2701 aa7.08□□□□□ -1.28
LRRC28-216ENST00000559819 TRBV10-2A0A0K0K1G8 114 aa7.08□□□□□ -1.28
LRRC28-216ENST00000559819 TEX49A0A1B0GTD5 131 aa7.08□□□□□ -1.28
LRRC28-216ENST00000559819 J3QKU1 62 aa7.08□□□□□ -1.28
LRRC28-216ENST00000559819 FHL2Q14192 279 aa7.08□□□□□ -1.28
LRRC28-216ENST00000559819 OVOL2Q9BRP0 275 aa7.08□□□□□ -1.28
LRRC28-216ENST00000559819 IGLV4-60A0A075B6I1 120 aa7.07□□□□□ -1.28
LRRC28-216ENST00000559819 TRBV6-4A0A1B0GX49 114 aa7.07□□□□□ -1.28
LRRC28-216ENST00000559819 HILS1P60008 231 aa7.07□□□□□ -1.28
LRRC28-216ENST00000559819 H7C423 109 aa7.07□□□□□ -1.28
LRRC28-216ENST00000559819 DEFB130BP0DP73 79 aa7.07□□□□□ -1.28
LRRC28-216ENST00000559819 DEFB130AP0DP74 79 aa7.07□□□□□ -1.28
LRRC28-216ENST00000559819 M0QXV9 152 aa7.07□□□□□ -1.28
LRRC28-216ENST00000559819 C2orf82Q6UX34 121 aa7.07□□□□□ -1.28
LRRC28-216ENST00000559819 RNF183Q96D59 192 aa7.07□□□□□ -1.28
LRRC28-216ENST00000559819 COX6CP09669 75 aa7.06□□□□□ -1.28
LRRC28-216ENST00000559819 SPATA3Q8NHX4 192 aa7.06□□□□□ -1.28
LRRC28-216ENST00000559819 FAM110AQ9BQ89 295 aa7.06□□□□□ -1.28
LRRC28-216ENST00000559819 LST1O00453 97 aa7.06□□□□□ -1.28
LRRC28-216ENST00000559819 TOMM7Q9P0U1 55 aa7.06□□□□□ -1.28
LRRC28-216ENST00000559819 CRLF1O75462 422 aa7.05□□□□□ -1.28
LRRC28-216ENST00000559819 CHCHD5Q9BSY4 110 aa7.05□□□□□ -1.28
LRRC28-216ENST00000559819 TRBV6-8A0A0A6YYG3 113 aa7.05□□□□□ -1.28
LRRC28-216ENST00000559819 PF4P02776 101 aa7.04□□□□□ -1.28
LRRC28-216ENST00000559819 UBE2WQ96B02 151 aa7.04□□□□□ -1.28
LRRC28-216ENST00000559819 COX7B2Q8TF08 81 aa7.04□□□□□ -1.28
LRRC28-216ENST00000559819 UNC79Q9P2D8 2635 aa7.03□□□□□ -1.28
LRRC28-216ENST00000559819 FASNP49327 2511 aaKnown RBP7.03□□□□□ -1.28
LRRC28-216ENST00000559819 LINC00482Q8N8I6 264 aa7.03□□□□□ -1.28
LRRC28-216ENST00000559819 FN1P02751 2386 aaKnown RBP7.02□□□□□ -1.29
LRRC28-216ENST00000559819 A0A096LPF7 62 aa7.02□□□□□ -1.29
LRRC28-216ENST00000559819 HERV-K104P63124 156 aa7.02□□□□□ -1.29
LRRC28-216ENST00000559819 C5orf38Q86SI9 138 aa7.02□□□□□ -1.29
LRRC28-216ENST00000559819 LINC01600Q96MT4 127 aa7.02□□□□□ -1.29
LRRC28-216ENST00000559819 MIR7-3HGQ8N6C7 128 aa7.02□□□□□ -1.29
LRRC28-216ENST00000559819 HELZ2Q9BYK8 2649 aaKnown RBP7.02□□□□□ -1.29
LRRC28-216ENST00000559819 TRAV8-4A0A0B4J246 113 aa7.01□□□□□ -1.29
LRRC28-216ENST00000559819 TMEM262E9PQX1 116 aa7.01□□□□□ -1.29
LRRC28-216ENST00000559819 H3BT86 120 aa7.01□□□□□ -1.29
LRRC28-216ENST00000559819 GYPEP15421 78 aa7.01□□□□□ -1.29
LRRC28-216ENST00000559819 CKS1BP61024 79 aa7.01□□□□□ -1.29
LRRC28-216ENST00000559819 COX7A2LO14548 114 aa7.01□□□□□ -1.29
LRRC28-216ENST00000559819 C11orf68Q9H3H3 251 aaKnown RBP7.01□□□□□ -1.29
LRRC28-216ENST00000559819 X6R8D5 127 aa7.01□□□□□ -1.29
LRRC28-216ENST00000559819 HIVEP2P31629 2446 aa7.01□□□□□ -1.29
LRRC28-216ENST00000559819 DEFB4AO15263 64 aa7□□□□□ -1.29
LRRC28-216ENST00000559819 LY6G6DO95868 133 aa7□□□□□ -1.29
LRRC28-216ENST00000559819 CLPSL2Q6UWE3 100 aa7□□□□□ -1.29
LRRC28-216ENST00000559819 SHISA2Q6UWI4 295 aa7□□□□□ -1.29
LRRC28-216ENST00000559819 IGHV3OR16-9A0A0B4J2B5 98 aa7□□□□□ -1.29
LRRC28-216ENST00000559819 FAM218AQ96MZ4 157 aa6.99□□□□□ -1.29
LRRC28-216ENST00000559819 LINC00158P58513 81 aa6.99□□□□□ -1.29
LRRC28-216ENST00000559819 COPS9Q8WXC6 57 aa6.99□□□□□ -1.29
LRRC28-216ENST00000559819 LINC00959A0A1B0GUT2 108 aa6.99□□□□□ -1.29
LRRC28-216ENST00000559819 A0A1B0GV72 72 aa6.99□□□□□ -1.29
LRRC28-216ENST00000559819 PFN2P35080 140 aa6.99□□□□□ -1.29
LRRC28-216ENST00000559819 LINC00337Q8N6G1 96 aa6.99□□□□□ -1.29
LRRC28-216ENST00000559819 LINC00612Q8N6U2 182 aa6.99□□□□□ -1.29
LRRC28-216ENST00000559819 KIR2DL5BQ8NHK3 375 aa6.99□□□□□ -1.29
LRRC28-216ENST00000559819 GCN1Q92616 2671 aaKnown RBP6.98□□□□□ -1.29
LRRC28-216ENST00000559819 IGKV2-28A0A075B6P5 120 aa6.98□□□□□ -1.29
LRRC28-216ENST00000559819 IGKV2D-28P01615 120 aa6.98□□□□□ -1.29
LRRC28-216ENST00000559819 XCL1P47992 114 aa6.98□□□□□ -1.29
LRRC28-216ENST00000559819 CITED1Q99966 193 aa6.98□□□□□ -1.29
LRRC28-216ENST00000559819 NBEAL2Q6ZNJ1 2754 aa6.98□□□□□ -1.29
LRRC28-216ENST00000559819 A0A087WZ39 114 aa6.98□□□□□ -1.29
LRRC28-216ENST00000559819 FAM222AQ5U5X8 452 aa6.98□□□□□ -1.29
LRRC28-216ENST00000559819 SND1-IT1Q9HBX3 110 aa6.98□□□□□ -1.29
LRRC28-216ENST00000559819 CCL18P55774 89 aa6.97□□□□□ -1.29
LRRC28-216ENST00000559819 DEFB135Q30KP9 77 aa6.97□□□□□ -1.29
LRRC28-216ENST00000559819 TTC32Q5I0X7 151 aa6.97□□□□□ -1.29
LRRC28-216ENST00000559819 C15orf53Q8NAA6 179 aa6.97□□□□□ -1.29
LRRC28-216ENST00000559819 VWFP04275 2813 aa6.97□□□□□ -1.29
LRRC28-216ENST00000559819 INAFM1C9JVW0 142 aa6.96□□□□□ -1.29
LRRC28-216ENST00000559819 CRPP02741 224 aa6.96□□□□□ -1.29
LRRC28-216ENST00000559819 Q8N3U1 123 aa6.96□□□□□ -1.29
LRRC28-216ENST00000559819 SNCGO76070 127 aa6.96□□□□□ -1.3
LRRC28-216ENST00000559819 Q9HAA7 133 aa6.96□□□□□ -1.3
LRRC28-216ENST00000559819 HECTD1Q9ULT8 2610 aa6.95□□□□□ -1.3
LRRC28-216ENST00000559819 TRAV13-2A0A0B4J235 113 aa6.95□□□□□ -1.3
LRRC28-216ENST00000559819 DEFB121Q5J5C9 76 aa6.95□□□□□ -1.3
LRRC28-216ENST00000559819 PRO0255Q9UI72 69 aa6.95□□□□□ -1.3
LRRC28-216ENST00000559819 PAX4O43316 350 aa6.94□□□□□ -1.3
LRRC28-216ENST00000559819 C22orf24Q9Y442 160 aa6.94□□□□□ -1.3
LRRC28-216ENST00000559819 BAALC-AS2P0C853 105 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms