RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 HIST1H2BDP58876 126 aa5.93□□□□□ -1.46
HMG20A-209ENST00000559728 HIST1H2BCP62807 126 aa5.93□□□□□ -1.46
HMG20A-209ENST00000559728 HIST2H2BEQ16778 126 aa5.93□□□□□ -1.46
HMG20A-209ENST00000559728 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.93□□□□□ -1.46
HMG20A-209ENST00000559728 DGAT2L7PQ6IED9 249 aa5.93□□□□□ -1.46
HMG20A-209ENST00000559728 NTN5Q8WTR8 489 aaPredicted RBP5.93□□□□□ -1.46
HMG20A-209ENST00000559728 HIST1H2BHQ93079 126 aa5.93□□□□□ -1.46
HMG20A-209ENST00000559728 RMI2Q96E14 147 aa5.93□□□□□ -1.46
HMG20A-209ENST00000559728 HIST1H2BNQ99877 126 aa5.93□□□□□ -1.46
HMG20A-209ENST00000559728 HIST1H2BMQ99879 126 aa5.93□□□□□ -1.46
HMG20A-209ENST00000559728 COX11Q9Y6N1 276 aa5.93□□□□□ -1.46
HMG20A-209ENST00000559728 CCL25O15444 150 aa5.92□□□□□ -1.46
HMG20A-209ENST00000559728 ERASQ7Z444 233 aa5.92□□□□□ -1.46
HMG20A-209ENST00000559728 Q8N814 137 aa5.92□□□□□ -1.46
HMG20A-209ENST00000559728 C15orf56Q8N910 161 aa5.92□□□□□ -1.46
HMG20A-209ENST00000559728 CHCHD1Q96BP2 118 aaKnown RBP5.92□□□□□ -1.46
HMG20A-209ENST00000559728 TMEM141Q96I45 108 aa5.92□□□□□ -1.46
HMG20A-209ENST00000559728 TRAV13-1A0A0B4J241 112 aa5.91□□□□□ -1.46
HMG20A-209ENST00000559728 USP17L23D6RBM5 183 aa5.91□□□□□ -1.46
HMG20A-209ENST00000559728 PSCAO43653 123 aa5.91□□□□□ -1.46
HMG20A-209ENST00000559728 SERF1AO75920 110 aa5.91□□□□□ -1.46
HMG20A-209ENST00000559728 XCL1P47992 114 aa5.91□□□□□ -1.46
HMG20A-209ENST00000559728 UBE2D1P51668 147 aa5.91□□□□□ -1.46
HMG20A-209ENST00000559728 RAB5BP61020 215 aa5.91□□□□□ -1.46
HMG20A-209ENST00000559728 COX6A2Q02221 97 aa5.91□□□□□ -1.46
HMG20A-209ENST00000559728 SMAGPQ0VAQ4 97 aa5.91□□□□□ -1.46
HMG20A-209ENST00000559728 LINC00242Q5T6M2 205 aa5.91□□□□□ -1.46
HMG20A-209ENST00000559728 CD164L2Q6UWJ8 174 aa5.91□□□□□ -1.46
HMG20A-209ENST00000559728 FAM19A3Q7Z5A8 133 aa5.91□□□□□ -1.46
HMG20A-209ENST00000559728 SPATA12Q7Z6I5 190 aa5.91□□□□□ -1.46
HMG20A-209ENST00000559728 SCGB3A1Q96QR1 104 aa5.91□□□□□ -1.46
HMG20A-209ENST00000559728 HERC2O95714 4834 aa5.91□□□□□ -1.46
HMG20A-209ENST00000559728 IGHV3OR16-9A0A0B4J2B5 98 aa5.9□□□□□ -1.46
HMG20A-209ENST00000559728 IFITM10A6NMD0 228 aa5.9□□□□□ -1.46
HMG20A-209ENST00000559728 C1orf196B1AJZ1 125 aa5.9□□□□□ -1.46
HMG20A-209ENST00000559728 HBDP02042 147 aa5.9□□□□□ -1.46
HMG20A-209ENST00000559728 SLPIP03973 132 aa5.9□□□□□ -1.46
HMG20A-209ENST00000559728 PRSS1P07477 247 aa5.9□□□□□ -1.46
HMG20A-209ENST00000559728 FAM19A2Q8N3H0 131 aa5.9□□□□□ -1.46
HMG20A-209ENST00000559728 G0S2P27469 103 aa5.89□□□□□ -1.47
HMG20A-209ENST00000559728 SS18Q15532 418 aa5.89□□□□□ -1.47
HMG20A-209ENST00000559728 COA6Q5JTJ3 125 aaKnown RBP5.89□□□□□ -1.47
HMG20A-209ENST00000559728 TEX43Q6ZNM6 134 aa5.89□□□□□ -1.47
HMG20A-209ENST00000559728 BAGE3Q86Y29 109 aa5.89□□□□□ -1.47
HMG20A-209ENST00000559728 VCX2Q9H322 139 aa5.89□□□□□ -1.47
HMG20A-209ENST00000559728 CST9LQ9H4G1 147 aa5.89□□□□□ -1.47
HMG20A-209ENST00000559728 LINC01549A6NIU2 74 aa5.88□□□□□ -1.47
HMG20A-209ENST00000559728 C5orf38Q86SI9 138 aa5.88□□□□□ -1.47
HMG20A-209ENST00000559728 A0A0J9YXV3 536 aa5.87□□□□□ -1.47
HMG20A-209ENST00000559728 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.87□□□□□ -1.47
HMG20A-209ENST00000559728 HSBP1O75506 76 aa5.87□□□□□ -1.47
HMG20A-209ENST00000559728 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
HMG20A-209ENST00000559728 HSPG2P98160 4391 aa5.86□□□□□ -1.47
HMG20A-209ENST00000559728 IGLV4-69A0A075B6H9 119 aa5.86□□□□□ -1.47
HMG20A-209ENST00000559728 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.86□□□□□ -1.47
HMG20A-209ENST00000559728 IGLV5-45A0A087WSX0 123 aa5.86□□□□□ -1.47
HMG20A-209ENST00000559728 A0A087WZ39 114 aa5.86□□□□□ -1.47
HMG20A-209ENST00000559728 GVQW2A0A096LPI5 108 aaPredicted RBP5.86□□□□□ -1.47
HMG20A-209ENST00000559728 KRTAP10-1P60331 282 aa5.86□□□□□ -1.47
HMG20A-209ENST00000559728 PMVKQ15126 192 aa5.86□□□□□ -1.47
HMG20A-209ENST00000559728 HIGD2BQ4VC39 106 aa5.86□□□□□ -1.47
HMG20A-209ENST00000559728 Q6ZN92 141 aa5.86□□□□□ -1.47
HMG20A-209ENST00000559728 IGHV3-64A0A075B6Q5 118 aa5.85□□□□□ -1.47
HMG20A-209ENST00000559728 IGHV1-58A0A0C4DH39 117 aa5.85□□□□□ -1.47
HMG20A-209ENST00000559728 ZNF561-AS1K7EIQ3 104 aa5.85□□□□□ -1.47
HMG20A-209ENST00000559728 COX7A2LO14548 114 aa5.85□□□□□ -1.47
HMG20A-209ENST00000559728 ATP5LO75964 103 aa5.85□□□□□ -1.47
HMG20A-209ENST00000559728 CNBPP62633 177 aaKnown RBP5.85□□□□□ -1.47
HMG20A-209ENST00000559728 KIAA0087Q14695 138 aa5.85□□□□□ -1.47
HMG20A-209ENST00000559728 LINC01620Q4KN68 170 aa5.85□□□□□ -1.47
HMG20A-209ENST00000559728 PAPPA-AS1Q5QFB9 102 aa5.85□□□□□ -1.47
HMG20A-209ENST00000559728 IFI27L1Q96BM0 104 aa5.85□□□□□ -1.47
HMG20A-209ENST00000559728 LINC00526Q96FQ7 95 aa5.85□□□□□ -1.47
HMG20A-209ENST00000559728 C2orf88Q9BSF0 95 aa5.85□□□□□ -1.47
HMG20A-209ENST00000559728 IGLV5-52A0A0A0MRZ9 124 aa5.84□□□□□ -1.47
HMG20A-209ENST00000559728 TINCRA0A1B0GVN0 87 aa5.84□□□□□ -1.47
HMG20A-209ENST00000559728 C16orf90A8MZG2 172 aa5.84□□□□□ -1.47
HMG20A-209ENST00000559728 IGLC3P0DOY3 106 aa5.84□□□□□ -1.47
HMG20A-209ENST00000559728 C14orf177Q52M58 125 aa5.84□□□□□ -1.47
HMG20A-209ENST00000559728 LINC01561Q8N1V8 128 aa5.84□□□□□ -1.47
HMG20A-209ENST00000559728 CDKN2A-AS1Q9UH64 79 aa5.84□□□□□ -1.47
HMG20A-209ENST00000559728 TRAV12-1A0A0B4J245 112 aa5.83□□□□□ -1.48
HMG20A-209ENST00000559728 hDV102S1A0JD36 115 aa5.83□□□□□ -1.48
HMG20A-209ENST00000559728 NDUFA6P56556 154 aa5.83□□□□□ -1.48
HMG20A-209ENST00000559728 CFAP161Q6P656 301 aa5.83□□□□□ -1.48
HMG20A-209ENST00000559728 KRTAP17-1Q9BYP8 105 aa5.83□□□□□ -1.48
HMG20A-209ENST00000559728 FAM30AQ9NZY2 134 aa5.83□□□□□ -1.48
HMG20A-209ENST00000559728 FAT1Q14517 4588 aa5.83□□□□□ -1.48
HMG20A-209ENST00000559728 C11orf86A6NJI1 115 aa5.82□□□□□ -1.48
HMG20A-209ENST00000559728 SMIM1B2RUZ4 78 aa5.82□□□□□ -1.48
HMG20A-209ENST00000559728 LEPROTL1O95214 131 aa5.82□□□□□ -1.48
HMG20A-209ENST00000559728 FABP4P15090 132 aa5.82□□□□□ -1.48
HMG20A-209ENST00000559728 ZNF22P17026 224 aaPredicted RBP5.82□□□□□ -1.48
HMG20A-209ENST00000559728 GCSHP23434 173 aa5.82□□□□□ -1.48
HMG20A-209ENST00000559728 HERVK_113P63121 156 aa5.82□□□□□ -1.48
HMG20A-209ENST00000559728 ODF1Q14990 250 aa5.82□□□□□ -1.48
HMG20A-209ENST00000559728 SDIM1Q6ZPB5 146 aa5.82□□□□□ -1.48
HMG20A-209ENST00000559728 C9orf163Q8N9P6 203 aa5.82□□□□□ -1.48
HMG20A-209ENST00000559728 MRPL35Q9NZE8 188 aaKnown RBP5.82□□□□□ -1.48
HMG20A-209ENST00000559728 MALP21145 153 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms