RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 LINC00242Q5T6M2 205 aa11.28□□□□□ -0.6
TPM1-219ENST00000559397 TRAV8-6A0A0B4J262 113 aa11.27□□□□□ -0.6
TPM1-219ENST00000559397 M0R143 59 aa11.27□□□□□ -0.6
TPM1-219ENST00000559397 RBX1P62877 108 aa11.27□□□□□ -0.6
TPM1-219ENST00000559397 SEC11AP67812 179 aa11.27□□□□□ -0.6
TPM1-219ENST00000559397 UPK3BQ9BT76 320 aa11.27□□□□□ -0.6
TPM1-219ENST00000559397 GEMIN7Q9H840 131 aaKnown RBP11.27□□□□□ -0.6
TPM1-219ENST00000559397 EREGO14944 169 aa11.27□□□□□ -0.61
TPM1-219ENST00000559397 HERVK_113P63121 156 aa11.27□□□□□ -0.61
TPM1-219ENST00000559397 HIGD1BQ9P298 99 aa11.27□□□□□ -0.61
TPM1-219ENST00000559397 KMT2CQ8NEZ4 4911 aaKnown RBP11.26□□□□□ -0.61
TPM1-219ENST00000559397 TRAV13-1A0A0B4J241 112 aa11.26□□□□□ -0.61
TPM1-219ENST00000559397 COX6A2Q02221 97 aa11.26□□□□□ -0.61
TPM1-219ENST00000559397 MPV17L2Q567V2 206 aa11.26□□□□□ -0.61
TPM1-219ENST00000559397 UBE2DNLQ8IWF7 75 aa11.26□□□□□ -0.61
TPM1-219ENST00000559397 MYMXA0A1B0GTQ4 84 aa11.25□□□□□ -0.61
TPM1-219ENST00000559397 TMEM262E9PQX1 116 aa11.25□□□□□ -0.61
TPM1-219ENST00000559397 LEPROTO15243 131 aa11.25□□□□□ -0.61
TPM1-219ENST00000559397 TSPEAR-AS2P59090 65 aa11.25□□□□□ -0.61
TPM1-219ENST00000559397 LINC00469Q8N7U9 141 aa11.25□□□□□ -0.61
TPM1-219ENST00000559397 LINC00476Q8WZB0 136 aa11.25□□□□□ -0.61
TPM1-219ENST00000559397 CDKN2A-AS1Q9UH64 79 aa11.25□□□□□ -0.61
TPM1-219ENST00000559397 DNAH2Q9P225 4427 aa11.25□□□□□ -0.61
TPM1-219ENST00000559397 WFDC10BQ8IUB3 73 aa11.24□□□□□ -0.61
TPM1-219ENST00000559397 J3QQQ9 107 aa11.24□□□□□ -0.61
TPM1-219ENST00000559397 PLEKHB2Q96CS7 222 aa11.24□□□□□ -0.61
TPM1-219ENST00000559397 IGHV1-58A0A0C4DH39 117 aa11.23□□□□□ -0.61
TPM1-219ENST00000559397 H3BRM9 83 aa11.23□□□□□ -0.61
TPM1-219ENST00000559397 LBHQ53QV2 105 aaPredicted RBP11.22□□□□□ -0.61
TPM1-219ENST00000559397 ZNF815PA8K554 130 aa11.21□□□□□ -0.61
TPM1-219ENST00000559397 LY6G6CO95867 125 aa11.21□□□□□ -0.61
TPM1-219ENST00000559397 IGHV3-30-3P0DP02 117 aa11.21□□□□□ -0.61
TPM1-219ENST00000559397 Q9H8V8 135 aa11.21□□□□□ -0.61
TPM1-219ENST00000559397 RYR2Q92736 4967 aa11.21□□□□□ -0.62
TPM1-219ENST00000559397 TRAV8-3A0A0A6YYJ7 113 aa11.2□□□□□ -0.62
TPM1-219ENST00000559397 LINC00959A0A1B0GUT2 108 aa11.2□□□□□ -0.62
TPM1-219ENST00000559397 HINT1P49773 126 aaPredicted RBP11.2□□□□□ -0.62
TPM1-219ENST00000559397 DNAH10Q8IVF4 4471 aa11.2□□□□□ -0.62
TPM1-219ENST00000559397 IGHV3-64A0A075B6Q5 118 aa11.2□□□□□ -0.62
TPM1-219ENST00000559397 IGLV5-39A0A0G2JS06 123 aa11.2□□□□□ -0.62
TPM1-219ENST00000559397 SPINK8P0C7L1 97 aa11.2□□□□□ -0.62
TPM1-219ENST00000559397 LGALS3P17931 250 aaKnown RBP11.2□□□□□ -0.62
TPM1-219ENST00000559397 DNAH10OSP0CZ25 163 aa11.19□□□□□ -0.62
TPM1-219ENST00000559397 HSD52Q0P140 79 aa11.19□□□□□ -0.62
TPM1-219ENST00000559397 BVES-AS1Q5T3Y7 98 aa11.19□□□□□ -0.62
TPM1-219ENST00000559397 Q8N3U1 123 aa11.19□□□□□ -0.62
TPM1-219ENST00000559397 IGHV3OR16-9A0A0B4J2B5 98 aa11.18□□□□□ -0.62
TPM1-219ENST00000559397 CCL25O15444 150 aa11.18□□□□□ -0.62
TPM1-219ENST00000559397 LINC01556Q5JQF7 62 aa11.18□□□□□ -0.62
TPM1-219ENST00000559397 IGKV3OR2-268A0A0C4DH90 116 aa11.17□□□□□ -0.62
TPM1-219ENST00000559397 SMIM1B2RUZ4 78 aa11.17□□□□□ -0.62
TPM1-219ENST00000559397 LCE6AA0A183 80 aa11.17□□□□□ -0.62
TPM1-219ENST00000559397 BATFQ16520 125 aa11.17□□□□□ -0.62
TPM1-219ENST00000559397 LINC00269Q8N2A0 174 aa11.17□□□□□ -0.62
TPM1-219ENST00000559397 FRAS1Q86XX4 4008 aa11.17□□□□□ -0.62
TPM1-219ENST00000559397 ANGP03950 147 aaKnown RBP11.16□□□□□ -0.62
TPM1-219ENST00000559397 SS18Q15532 418 aa11.16□□□□□ -0.62
TPM1-219ENST00000559397 IGHV3-30P01768 117 aa11.15□□□□□ -0.62
TPM1-219ENST00000559397 IGHV3-33P01772 117 aa11.15□□□□□ -0.62
TPM1-219ENST00000559397 IGHV3-30-5P0DP03 117 aa11.15□□□□□ -0.62
TPM1-219ENST00000559397 TAL2Q16559 108 aa11.15□□□□□ -0.62
TPM1-219ENST00000559397 A0A087WZ39 114 aa11.14□□□□□ -0.63
TPM1-219ENST00000559397 PRR34Q9NV39 138 aa11.14□□□□□ -0.63
TPM1-219ENST00000559397 REG3AQ06141 175 aa11.14□□□□□ -0.63
TPM1-219ENST00000559397 COL5A1-AS1Q5SY13 56 aa11.14□□□□□ -0.63
TPM1-219ENST00000559397 CLPSL2Q6UWE3 100 aa11.14□□□□□ -0.63
TPM1-219ENST00000559397 SCGB1D4Q6XE38 83 aa11.14□□□□□ -0.63
TPM1-219ENST00000559397 C10orf126Q8N4M7 172 aa11.14□□□□□ -0.63
TPM1-219ENST00000559397 DNAH17Q9UFH2 4485 aa11.13□□□□□ -0.63
TPM1-219ENST00000559397 KRTAP1-5Q9BYS1 174 aa11.13□□□□□ -0.63
TPM1-219ENST00000559397 NDUFA12Q9UI09 145 aa11.13□□□□□ -0.63
TPM1-219ENST00000559397 NBDYA0A0U1RRE5 68 aa11.12□□□□□ -0.63
TPM1-219ENST00000559397 LINC01561Q8N1V8 128 aa11.12□□□□□ -0.63
TPM1-219ENST00000559397 ORAOV1Q8WV07 137 aa11.12□□□□□ -0.63
TPM1-219ENST00000559397 TM2D2Q9BX73 214 aa11.12□□□□□ -0.63
TPM1-219ENST00000559397 K7EP13 123 aa11.11□□□□□ -0.63
TPM1-219ENST00000559397 NDUFA1O15239 70 aa11.11□□□□□ -0.63
TPM1-219ENST00000559397 SPANXB1Q9NS25 103 aaPredicted RBP11.11□□□□□ -0.63
TPM1-219ENST00000559397 A0A0J9YXY3 114 aa11.11□□□□□ -0.63
TPM1-219ENST00000559397 XCL1P47992 114 aa11.11□□□□□ -0.63
TPM1-219ENST00000559397 CD164L2Q6UWJ8 174 aa11.11□□□□□ -0.63
TPM1-219ENST00000559397 CEND1Q8N111 149 aa11.11□□□□□ -0.63
TPM1-219ENST00000559397 KLK12Q9UKR0 248 aa11.11□□□□□ -0.63
TPM1-219ENST00000559397 RYR3Q15413 4870 aa11.1□□□□□ -0.63
TPM1-219ENST00000559397 Q6ZR54 194 aa11.1□□□□□ -0.63
TPM1-219ENST00000559397 C5orf38Q86SI9 138 aa11.1□□□□□ -0.63
TPM1-219ENST00000559397 CHCHD10Q8WYQ3 142 aaPredicted RBP11.1□□□□□ -0.63
TPM1-219ENST00000559397 HIST1H4GQ99525 98 aa11.1□□□□□ -0.63
TPM1-219ENST00000559397 IBA57-AS1B1ANH7 110 aa11.09□□□□□ -0.63
TPM1-219ENST00000559397 TTC32Q5I0X7 151 aa11.09□□□□□ -0.63
TPM1-219ENST00000559397 ENHOQ6UWT2 76 aa11.09□□□□□ -0.63
TPM1-219ENST00000559397 M0R2N4 97 aa11.08□□□□□ -0.64
TPM1-219ENST00000559397 GCSHP23434 173 aa11.08□□□□□ -0.64
TPM1-219ENST00000559397 FXYD2P54710 66 aa11.08□□□□□ -0.64
TPM1-219ENST00000559397 ZNF625Q96I27 306 aaPredicted RBP11.08□□□□□ -0.64
TPM1-219ENST00000559397 COX7B2Q8TF08 81 aa11.07□□□□□ -0.64
TPM1-219ENST00000559397 LITAFQ99732 161 aa11.07□□□□□ -0.64
TPM1-219ENST00000559397 FAT2Q9NYQ8 4349 aa11.06□□□□□ -0.64
TPM1-219ENST00000559397 TIMM17BO60830 172 aa11.06□□□□□ -0.64
TPM1-219ENST00000559397 FOXI1Q12951 378 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms