RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 DAZ4Q86SG3 579 aaKnown RBP12.55□□□□□ -0.4
XRCC3-218ENST00000557439 DAZ3Q9NR90 486 aaKnown RBP12.55□□□□□ -0.4
XRCC3-218ENST00000557439 GAGE6Q13070 117 aa12.54□□□□□ -0.4
XRCC3-218ENST00000557439 C19orf73Q9NVV2 129 aa12.54□□□□□ -0.4
XRCC3-218ENST00000557439 TRBV10-1A0A0K0K1A3 114 aa12.54□□□□□ -0.4
XRCC3-218ENST00000557439 F5H768 121 aa12.54□□□□□ -0.4
XRCC3-218ENST00000557439 UBE2L6O14933 153 aa12.53□□□□□ -0.4
XRCC3-218ENST00000557439 TIMM17BO60830 172 aa12.53□□□□□ -0.4
XRCC3-218ENST00000557439 CIRBPQ14011 172 aaKnown RBP12.53□□□□□ -0.4
XRCC3-218ENST00000557439 TMEM243Q9BU79 118 aa12.52□□□□□ -0.41
XRCC3-218ENST00000557439 VWFP04275 2813 aa12.51□□□□□ -0.41
XRCC3-218ENST00000557439 TRGV4A0A0C4DH28 118 aa12.51□□□□□ -0.41
XRCC3-218ENST00000557439 COX6CP09669 75 aa12.51□□□□□ -0.41
XRCC3-218ENST00000557439 IGLV4-60A0A075B6I1 120 aa12.51□□□□□ -0.41
XRCC3-218ENST00000557439 CRLF1O75462 422 aa12.51□□□□□ -0.41
XRCC3-218ENST00000557439 IFITM1P13164 125 aa12.51□□□□□ -0.41
XRCC3-218ENST00000557439 SMR3AQ99954 134 aa12.51□□□□□ -0.41
XRCC3-218ENST00000557439 TOMM7Q9P0U1 55 aa12.51□□□□□ -0.41
XRCC3-218ENST00000557439 IGLV1-51P01701 117 aa12.5□□□□□ -0.41
XRCC3-218ENST00000557439 HELZ2Q9BYK8 2649 aaKnown RBP12.5□□□□□ -0.41
XRCC3-218ENST00000557439 LST1O00453 97 aa12.5□□□□□ -0.41
XRCC3-218ENST00000557439 CSNK1G2-AS1Q8NCQ2 148 aa12.5□□□□□ -0.41
XRCC3-218ENST00000557439 UBE2WQ96B02 151 aa12.5□□□□□ -0.41
XRCC3-218ENST00000557439 CSDC2Q9Y534 153 aaKnown RBP12.5□□□□□ -0.41
XRCC3-218ENST00000557439 FASNP49327 2511 aaKnown RBP12.5□□□□□ -0.41
XRCC3-218ENST00000557439 C16orf74Q96GX8 76 aa12.49□□□□□ -0.41
XRCC3-218ENST00000557439 A0A1B0GV72 72 aa12.49□□□□□ -0.41
XRCC3-218ENST00000557439 M0QXV9 152 aa12.48□□□□□ -0.41
XRCC3-218ENST00000557439 DEFB130BP0DP73 79 aa12.48□□□□□ -0.41
XRCC3-218ENST00000557439 DEFB130AP0DP74 79 aa12.48□□□□□ -0.41
XRCC3-218ENST00000557439 FAM19A3Q7Z5A8 133 aa12.47□□□□□ -0.41
XRCC3-218ENST00000557439 RNASE1P07998 156 aaKnown RBP12.46□□□□□ -0.41
XRCC3-218ENST00000557439 FHL2Q14192 279 aa12.46□□□□□ -0.42
XRCC3-218ENST00000557439 TRAV8-4A0A0B4J246 113 aa12.45□□□□□ -0.42
XRCC3-218ENST00000557439 TMEM262E9PQX1 116 aa12.45□□□□□ -0.42
XRCC3-218ENST00000557439 RNF183Q96D59 192 aa12.45□□□□□ -0.42
XRCC3-218ENST00000557439 CHCHD5Q9BSY4 110 aa12.45□□□□□ -0.42
XRCC3-218ENST00000557439 UNC79Q9P2D8 2635 aa12.45□□□□□ -0.42
XRCC3-218ENST00000557439 HIVEP2P31629 2446 aa12.45□□□□□ -0.42
XRCC3-218ENST00000557439 NOTCH2Q04721 2471 aa12.44□□□□□ -0.42
XRCC3-218ENST00000557439 KRTAP10-3P60369 221 aa12.44□□□□□ -0.42
XRCC3-218ENST00000557439 A0A096LPF7 62 aa12.43□□□□□ -0.42
XRCC3-218ENST00000557439 TRBV6-4A0A1B0GX49 114 aa12.43□□□□□ -0.42
XRCC3-218ENST00000557439 C5orf38Q86SI9 138 aa12.43□□□□□ -0.42
XRCC3-218ENST00000557439 SPATA3Q8NHX4 192 aa12.43□□□□□ -0.42
XRCC3-218ENST00000557439 C11orf68Q9H3H3 251 aaKnown RBP12.43□□□□□ -0.42
XRCC3-218ENST00000557439 MIR7-3HGQ8N6C7 128 aa12.42□□□□□ -0.42
XRCC3-218ENST00000557439 OVOL2Q9BRP0 275 aa12.42□□□□□ -0.42
XRCC3-218ENST00000557439 C16orf95Q9H693 158 aa12.42□□□□□ -0.42
XRCC3-218ENST00000557439 H3BT86 120 aa12.42□□□□□ -0.42
XRCC3-218ENST00000557439 TTC32Q5I0X7 151 aa12.42□□□□□ -0.42
XRCC3-218ENST00000557439 TEX29Q8N6K0 151 aa12.42□□□□□ -0.42
XRCC3-218ENST00000557439 FAM218AQ96MZ4 157 aa12.42□□□□□ -0.42
XRCC3-218ENST00000557439 CITED1Q99966 193 aa12.42□□□□□ -0.42
XRCC3-218ENST00000557439 TRBV6-8A0A0A6YYG3 113 aa12.41□□□□□ -0.42
XRCC3-218ENST00000557439 COX7B2Q8TF08 81 aa12.41□□□□□ -0.42
XRCC3-218ENST00000557439 CLPSL2Q6UWE3 100 aa12.41□□□□□ -0.42
XRCC3-218ENST00000557439 TRAV26-1A0A087WT03 109 aa12.4□□□□□ -0.42
XRCC3-218ENST00000557439 LINC01600Q96MT4 127 aa12.4□□□□□ -0.42
XRCC3-218ENST00000557439 COX7A2LO14548 114 aa12.4□□□□□ -0.42
XRCC3-218ENST00000557439 SHISA2Q6UWI4 295 aa12.4□□□□□ -0.42
XRCC3-218ENST00000557439 C15orf53Q8NAA6 179 aa12.4□□□□□ -0.42
XRCC3-218ENST00000557439 SNCGO76070 127 aa12.39□□□□□ -0.43
XRCC3-218ENST00000557439 HECTD1Q9ULT8 2610 aa12.39□□□□□ -0.43
XRCC3-218ENST00000557439 PFN2P35080 140 aa12.38□□□□□ -0.43
XRCC3-218ENST00000557439 LINC00337Q8N6G1 96 aa12.38□□□□□ -0.43
XRCC3-218ENST00000557439 DEFB4AO15263 64 aa12.38□□□□□ -0.43
XRCC3-218ENST00000557439 LINC00158P58513 81 aa12.38□□□□□ -0.43
XRCC3-218ENST00000557439 CMC4P56277 68 aaPredicted RBP12.37□□□□□ -0.43
XRCC3-218ENST00000557439 HERV-K104P63124 156 aa12.37□□□□□ -0.43
XRCC3-218ENST00000557439 IGHV3OR16-9A0A0B4J2B5 98 aa12.37□□□□□ -0.43
XRCC3-218ENST00000557439 LINC00482Q8N8I6 264 aa12.37□□□□□ -0.43
XRCC3-218ENST00000557439 Q9HAA7 133 aa12.37□□□□□ -0.43
XRCC3-218ENST00000557439 IGKV2-28A0A075B6P5 120 aa12.36□□□□□ -0.43
XRCC3-218ENST00000557439 IGKV2D-28P01615 120 aa12.36□□□□□ -0.43
XRCC3-218ENST00000557439 HILS1P60008 231 aa12.36□□□□□ -0.43
XRCC3-218ENST00000557439 TENM1Q9UKZ4 2725 aa12.36□□□□□ -0.43
XRCC3-218ENST00000557439 GYPEP15421 78 aa12.36□□□□□ -0.43
XRCC3-218ENST00000557439 PF4P02776 101 aa12.35□□□□□ -0.43
XRCC3-218ENST00000557439 GAGE2BQ13066 116 aa12.35□□□□□ -0.43
XRCC3-218ENST00000557439 GAGE2EQ4V326 116 aa12.35□□□□□ -0.43
XRCC3-218ENST00000557439 ANAPC13Q9BS18 74 aa12.35□□□□□ -0.43
XRCC3-218ENST00000557439 GAGE2DQ9UEU5 116 aa12.35□□□□□ -0.43
XRCC3-218ENST00000557439 XCL1P47992 114 aa12.35□□□□□ -0.43
XRCC3-218ENST00000557439 FAM110AQ9BQ89 295 aa12.35□□□□□ -0.43
XRCC3-218ENST00000557439 SND1-IT1Q9HBX3 110 aa12.35□□□□□ -0.43
XRCC3-218ENST00000557439 OTOGQ6ZRI0 2925 aa12.35□□□□□ -0.43
XRCC3-218ENST00000557439 Q8N3U1 123 aa12.33□□□□□ -0.43
XRCC3-218ENST00000557439 CCL18P55774 89 aa12.33□□□□□ -0.44
XRCC3-218ENST00000557439 LINC00959A0A1B0GUT2 108 aa12.32□□□□□ -0.44
XRCC3-218ENST00000557439 NHLRC4P0CG21 123 aaPredicted RBP12.32□□□□□ -0.44
XRCC3-218ENST00000557439 CRPP02741 224 aa12.32□□□□□ -0.44
XRCC3-218ENST00000557439 C22orf24Q9Y442 160 aa12.32□□□□□ -0.44
XRCC3-218ENST00000557439 COPS9Q8WXC6 57 aa12.31□□□□□ -0.44
XRCC3-218ENST00000557439 X6R8D5 127 aa12.31□□□□□ -0.44
XRCC3-218ENST00000557439 BAALC-AS2P0C853 105 aa12.31□□□□□ -0.44
XRCC3-218ENST00000557439 TRRAPQ9Y4A5 3859 aa12.3□□□□□ -0.44
XRCC3-218ENST00000557439 A0A087WZ39 114 aa12.3□□□□□ -0.44
XRCC3-218ENST00000557439 DEFB121Q5J5C9 76 aa12.29□□□□□ -0.44
XRCC3-218ENST00000557439 SMIM11BQ8TCY0 68 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms