RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 MP68P56378 58 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 C5orf38Q86SI9 138 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 ZFAND2AQ8N6M9 145 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 SLC25A29Q8N8R3 303 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 NKAPP1Q8N9T2 125 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 COX6CP09669 75 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 GYPEP15421 78 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 HIST1H4AP62805 103 aaKnown RBP3.74□□□□□ -1.81
TMEM260-210ENST00000556422 REG3AQ06141 175 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 Q6YL49 198 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 MYOZ3Q8TDC0 251 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 IFI27L1Q96BM0 104 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 RHPN1-AS1Q9BWJ2 59 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 A0A0B4J2C4 111 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 LINC01619G3V211 115 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 LST1O00453 97 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 UBE2BP63146 152 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 FHL2Q14192 279 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 RHOHQ15669 191 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 LCA10Q71F78 164 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.74□□□□□ -1.81
TMEM260-210ENST00000556422 ZNF702PQ9H963 129 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 SETD2Q9BYW2 2564 aaPredicted RBP3.74□□□□□ -1.81
TMEM260-210ENST00000556422 MTORP42345 2549 aa3.74□□□□□ -1.81
TMEM260-210ENST00000556422 SUMO2P61956 95 aaKnown RBP3.73□□□□□ -1.81
TMEM260-210ENST00000556422 TRBV10-2A0A0K0K1G8 114 aa3.73□□□□□ -1.81
TMEM260-210ENST00000556422 ZNF876PQ49A33 203 aa3.73□□□□□ -1.81
TMEM260-210ENST00000556422 ORMDL3Q8N138 153 aa3.73□□□□□ -1.81
TMEM260-210ENST00000556422 TEP1Q99973 2627 aaKnown RBP3.73□□□□□ -1.81
TMEM260-210ENST00000556422 IGKV3-7A0A075B6H7 116 aa3.73□□□□□ -1.81
TMEM260-210ENST00000556422 LOC389332A0A1B0GUA5 103 aa3.73□□□□□ -1.81
TMEM260-210ENST00000556422 LENEPQ9Y5L5 61 aa3.73□□□□□ -1.81
TMEM260-210ENST00000556422 F8P00451 2351 aa3.72□□□□□ -1.81
TMEM260-210ENST00000556422 IGHV4-4A0A075B6R2 117 aa3.72□□□□□ -1.81
TMEM260-210ENST00000556422 FXYD7P58549 80 aa3.72□□□□□ -1.81
TMEM260-210ENST00000556422 UBE2D3P61077 147 aa3.72□□□□□ -1.81
TMEM260-210ENST00000556422 UBE2D2P62837 147 aa3.72□□□□□ -1.81
TMEM260-210ENST00000556422 XCL1P47992 114 aa3.72□□□□□ -1.81
TMEM260-210ENST00000556422 XCL2Q9UBD3 114 aa3.72□□□□□ -1.81
TMEM260-210ENST00000556422 WNK1Q9H4A3 2382 aa3.72□□□□□ -1.81
TMEM260-210ENST00000556422 LINC01546A6NGU7 62 aa3.71□□□□□ -1.81
TMEM260-210ENST00000556422 ATP5EP56381 51 aaPredicted RBP3.71□□□□□ -1.81
TMEM260-210ENST00000556422 CLEC2BQ92478 149 aa3.71□□□□□ -1.81
TMEM260-210ENST00000556422 TOMM6Q96B49 74 aa3.71□□□□□ -1.81
TMEM260-210ENST00000556422 IGLV2-18A0A075B6J9 118 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 IGHV4OR15-8A0A075B7B6 117 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 A0A087WW49 117 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 A0A087WZ39 114 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 IGKV3D-7A0A0C4DH55 119 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 UBE2AP49459 152 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 C18orf65Q6ZTR6 163 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 Q6ZVQ6 151 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 Q8N2B8 174 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 PRO1854Q9UHT4 67 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 OTOGQ6ZRI0 2925 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 ADARB2-AS1A8MUL3 147 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 KLLNB2CW77 178 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 NXPH4O95158 308 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 PRSS2P07478 247 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 SDIM1Q6ZPB5 146 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 NRACQ8N912 160 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 DKK2Q9UBU2 259 aa3.71□□□□□ -1.82
TMEM260-210ENST00000556422 RNASE3P12724 160 aaKnown RBP3.7□□□□□ -1.82
TMEM260-210ENST00000556422 X6R8D5 127 aa3.7□□□□□ -1.82
TMEM260-210ENST00000556422 IGKV2D-26A0A0A0MRZ7 120 aa3.7□□□□□ -1.82
TMEM260-210ENST00000556422 C6orf99Q4VX62 202 aa3.7□□□□□ -1.82
TMEM260-210ENST00000556422 UPK3BQ9BT76 320 aa3.7□□□□□ -1.82
TMEM260-210ENST00000556422 TRAV21A0A0B4J279 112 aa3.7□□□□□ -1.82
TMEM260-210ENST00000556422 F8WEM9 126 aa3.7□□□□□ -1.82
TMEM260-210ENST00000556422 DEFB136Q30KP8 78 aa3.7□□□□□ -1.82
TMEM260-210ENST00000556422 Q8N8P6 123 aa3.7□□□□□ -1.82
TMEM260-210ENST00000556422 K7EQG2 157 aa3.7□□□□□ -1.82
TMEM260-210ENST00000556422 GNRH2O43555 120 aa3.7□□□□□ -1.82
TMEM260-210ENST00000556422 RNASE4P34096 147 aaKnown RBP3.7□□□□□ -1.82
TMEM260-210ENST00000556422 KRTAP1-1Q07627 177 aa3.7□□□□□ -1.82
TMEM260-210ENST00000556422 PIK3CD-AS1Q5SR53 167 aa3.7□□□□□ -1.82
TMEM260-210ENST00000556422 SPANXN1Q5VSR9 72 aa3.69□□□□□ -1.82
TMEM260-210ENST00000556422 JMJD1CQ15652 2540 aa3.69□□□□□ -1.82
TMEM260-210ENST00000556422 A0A0J9YX75 114 aa3.69□□□□□ -1.82
TMEM260-210ENST00000556422 DNAL4O96015 105 aa3.69□□□□□ -1.82
TMEM260-210ENST00000556422 SLURP1P55000 103 aa3.69□□□□□ -1.82
TMEM260-210ENST00000556422 NANOS2P60321 138 aaKnown RBP3.69□□□□□ -1.82
TMEM260-210ENST00000556422 NDUFA11Q86Y39 141 aa3.69□□□□□ -1.82
TMEM260-210ENST00000556422 ZNF815PA8K554 130 aa3.68□□□□□ -1.82
TMEM260-210ENST00000556422 PSPHP1O15172 72 aa3.68□□□□□ -1.82
TMEM260-210ENST00000556422 MED14OSP0DP75 135 aa3.68□□□□□ -1.82
TMEM260-210ENST00000556422 LINC00315P59091 139 aa3.68□□□□□ -1.82
TMEM260-210ENST00000556422 ESRGQ1W209 222 aa3.68□□□□□ -1.82
TMEM260-210ENST00000556422 KIF25-AS1Q9Y6Z4 181 aa3.68□□□□□ -1.82
TMEM260-210ENST00000556422 VWFP04275 2813 aa3.68□□□□□ -1.82
TMEM260-210ENST00000556422 TRBV7-3A0A075B6L6 115 aa3.68□□□□□ -1.82
TMEM260-210ENST00000556422 CFC1BP0CG36 223 aa3.68□□□□□ -1.82
TMEM260-210ENST00000556422 CFC1P0CG37 223 aa3.68□□□□□ -1.82
TMEM260-210ENST00000556422 C7orf65Q6ZTY9 151 aa3.68□□□□□ -1.82
TMEM260-210ENST00000556422 C14orf178Q8N769 122 aaPredicted RBP3.68□□□□□ -1.82
TMEM260-210ENST00000556422 DYNLRB2Q8TF09 96 aa3.68□□□□□ -1.82
TMEM260-210ENST00000556422 TRAV12-3A0A0B4J271 114 aa3.67□□□□□ -1.82
TMEM260-210ENST00000556422 NDUFC1O43677 76 aa3.67□□□□□ -1.82
TMEM260-210ENST00000556422 Q6ZSV7 163 aa3.67□□□□□ -1.82
TMEM260-210ENST00000556422 DAND5Q8N907 189 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms