RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 REG3AQ06141 175 aa3.67□□□□□ -1.82
PRKCH-220ENST00000556164 KRTAP26-1Q6PEX3 210 aa3.67□□□□□ -1.82
PRKCH-220ENST00000556164 C2orf66Q6UXQ4 117 aa3.67□□□□□ -1.82
PRKCH-220ENST00000556164 SMIM29Q86T20 159 aa3.67□□□□□ -1.82
PRKCH-220ENST00000556164 GTSF1Q8WW33 167 aa3.67□□□□□ -1.82
PRKCH-220ENST00000556164 PRR34Q9NV39 138 aa3.67□□□□□ -1.82
PRKCH-220ENST00000556164 RNF213Q63HN8 5207 aa3.67□□□□□ -1.82
PRKCH-220ENST00000556164 TRBV25-1A0A075B6N4 114 aa3.66□□□□□ -1.82
PRKCH-220ENST00000556164 A0A1B0GUV1 79 aa3.66□□□□□ -1.82
PRKCH-220ENST00000556164 C20orf202A1L168 122 aa3.66□□□□□ -1.82
PRKCH-220ENST00000556164 LINC00862A6NCI5 91 aa3.66□□□□□ -1.82
PRKCH-220ENST00000556164 ATP6V0CP27449 155 aa3.66□□□□□ -1.82
PRKCH-220ENST00000556164 RAB5CP51148 216 aa3.66□□□□□ -1.82
PRKCH-220ENST00000556164 DEFA3P59666 94 aa3.66□□□□□ -1.82
PRKCH-220ENST00000556164 COA6Q5JTJ3 125 aaKnown RBP3.66□□□□□ -1.82
PRKCH-220ENST00000556164 AKR1C8PQ5T2L2 129 aa3.66□□□□□ -1.82
PRKCH-220ENST00000556164 REG3GQ6UW15 175 aa3.66□□□□□ -1.82
PRKCH-220ENST00000556164 NTM-AS1Q6ZSK4 140 aa3.66□□□□□ -1.82
PRKCH-220ENST00000556164 PSMG3Q9BT73 122 aaPredicted RBP3.66□□□□□ -1.82
PRKCH-220ENST00000556164 DERL1Q9BUN8 251 aa3.66□□□□□ -1.82
PRKCH-220ENST00000556164 TMEM126AQ9H061 195 aa3.66□□□□□ -1.82
PRKCH-220ENST00000556164 PLAC8Q9NZF1 115 aa3.66□□□□□ -1.82
PRKCH-220ENST00000556164 IGHV1-24A0A0C4DH33 117 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 IGKV2-24A0A0C4DH68 120 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 MUC21A0A0G2JKD1 596 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 A0A0J9YXV3 536 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 TRBV6-1A0A0K0K1D8 114 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 MUC21A0A140T8X8 626 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 MAP1LC3B2A6NCE7 125 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 PSPHP1O15172 72 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 SLPIP03973 132 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 LINC01547P58512 204 aaPredicted RBP3.65□□□□□ -1.83
PRKCH-220ENST00000556164 RAB5BP61020 215 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 UBE2G1P62253 170 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 SERF2P84101 59 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 COX6A2Q02221 97 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 FA2HQ7L5A8 372 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 OR10AG1Q8NH19 301 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 HIST1H2BAQ96A08 127 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 FMC1Q96HJ9 113 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 ZNF471Q9BX82 626 aaPredicted RBP3.65□□□□□ -1.83
PRKCH-220ENST00000556164 MAP1LC3BQ9GZQ8 125 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 TNFSF18Q9UNG2 199 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 ZFP30Q9Y2G7 519 aa3.65□□□□□ -1.83
PRKCH-220ENST00000556164 CTXND1A0A1B0GTU2 59 aa3.64□□□□□ -1.83
PRKCH-220ENST00000556164 A0A1B0GXF2 115 aa3.64□□□□□ -1.83
PRKCH-220ENST00000556164 M0R143 59 aa3.64□□□□□ -1.83
PRKCH-220ENST00000556164 SMIM17P0DL12 118 aa3.64□□□□□ -1.83
PRKCH-220ENST00000556164 PSMB2P49721 201 aa3.64□□□□□ -1.83
PRKCH-220ENST00000556164 RPS28P62857 69 aaKnown RBP3.64□□□□□ -1.83
PRKCH-220ENST00000556164 CACNG7P62955 275 aa3.64□□□□□ -1.83
PRKCH-220ENST00000556164 IQCJQ1A5X6 159 aa3.64□□□□□ -1.83
PRKCH-220ENST00000556164 SPANXN1Q5VSR9 72 aa3.64□□□□□ -1.83
PRKCH-220ENST00000556164 COMMD7Q86VX2 200 aa3.64□□□□□ -1.83
PRKCH-220ENST00000556164 C20orf203Q8NBC4 194 aa3.64□□□□□ -1.83
PRKCH-220ENST00000556164 S100ZQ8WXG8 99 aa3.64□□□□□ -1.83
PRKCH-220ENST00000556164 NKX6-2Q9C056 277 aaPredicted RBP3.64□□□□□ -1.83
PRKCH-220ENST00000556164 IGLV4-60A0A075B6I1 120 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 NDUFS5O43920 106 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 LTAP01374 205 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 MGPP08493 103 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 GZMBP10144 247 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 RPS10P46783 165 aaKnown RBP3.63□□□□□ -1.83
PRKCH-220ENST00000556164 KRTAP10-8P60410 259 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 SMAGPQ0VAQ4 97 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 HIGD2BQ4VC39 106 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 C1orf195Q5TG92 126 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 SPINK6Q6UWN8 80 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 LINC01551Q86U37 167 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 C15orf56Q8N910 161 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 Q8NBF4 154 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 ORAOV1Q8WV07 137 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 AP1S3Q96PC3 154 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 MARVELD1Q9BSK0 173 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 TMEM243Q9BU79 118 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 GFRA4Q9GZZ7 299 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 SS18L2Q9UHA2 77 aa3.63□□□□□ -1.83
PRKCH-220ENST00000556164 IGLV8-61A0A075B6I0 122 aa3.62□□□□□ -1.83
PRKCH-220ENST00000556164 A0A087X002 238 aa3.62□□□□□ -1.83
PRKCH-220ENST00000556164 IGKV3OR2-268A0A0C4DH90 116 aa3.62□□□□□ -1.83
PRKCH-220ENST00000556164 UBE2L6O14933 153 aa3.62□□□□□ -1.83
PRKCH-220ENST00000556164 CXCL1P09341 107 aa3.62□□□□□ -1.83
PRKCH-220ENST00000556164 IFITM3Q01628 133 aa3.62□□□□□ -1.83
PRKCH-220ENST00000556164 OCIAD2Q56VL3 154 aa3.62□□□□□ -1.83
PRKCH-220ENST00000556164 LINC00173Q6ZV60 143 aa3.62□□□□□ -1.83
PRKCH-220ENST00000556164 AQP10Q96PS8 301 aa3.62□□□□□ -1.83
PRKCH-220ENST00000556164 A0A096LNI7 61 aa3.61□□□□□ -1.83
PRKCH-220ENST00000556164 KRTAP4-16G5E9R7 235 aaPredicted RBP3.61□□□□□ -1.83
PRKCH-220ENST00000556164 HERVK_113P61574 105 aa3.61□□□□□ -1.83
PRKCH-220ENST00000556164 RPL7L1Q6DKI1 246 aaKnown RBP3.61□□□□□ -1.83
PRKCH-220ENST00000556164 TEX261Q6UWH6 196 aa3.61□□□□□ -1.83
PRKCH-220ENST00000556164 LINC00299Q6ZSB3 139 aa3.61□□□□□ -1.83
PRKCH-220ENST00000556164 OR5A1Q8NGJ0 315 aa3.61□□□□□ -1.83
PRKCH-220ENST00000556164 BORCS7Q96B45 105 aa3.61□□□□□ -1.83
PRKCH-220ENST00000556164 HSPB8Q9UJY1 196 aa3.61□□□□□ -1.83
PRKCH-220ENST00000556164 CARHSP1Q9Y2V2 147 aaKnown RBP3.61□□□□□ -1.83
PRKCH-220ENST00000556164 IGLV7-46A0A075B6I9 117 aa3.6□□□□□ -1.83
PRKCH-220ENST00000556164 M0QY20 66 aa3.6□□□□□ -1.83
PRKCH-220ENST00000556164 DEFA1P59665 94 aa3.6□□□□□ -1.83
PRKCH-220ENST00000556164 CXCL6P80162 114 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms