RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 STPG4Q8N801 248 aa7.65□□□□□ -1.18
CHGA-205ENST00000556098 Q9UF83 564 aa7.65□□□□□ -1.18
CHGA-205ENST00000556098 ICOSQ9Y6W8 199 aa7.65□□□□□ -1.18
CHGA-205ENST00000556098 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.64□□□□□ -1.19
CHGA-205ENST00000556098 A0A1B0GUV1 79 aa7.64□□□□□ -1.19
CHGA-205ENST00000556098 IGKV2-29A2NJV5 120 aaPredicted RBP7.64□□□□□ -1.19
CHGA-205ENST00000556098 CCL25O15444 150 aa7.64□□□□□ -1.19
CHGA-205ENST00000556098 NMUP48645 174 aa7.64□□□□□ -1.19
CHGA-205ENST00000556098 HERVK_113P63121 156 aa7.64□□□□□ -1.19
CHGA-205ENST00000556098 NTM-AS1Q6ZSK4 140 aa7.64□□□□□ -1.19
CHGA-205ENST00000556098 Q8N1X5 172 aa7.64□□□□□ -1.19
CHGA-205ENST00000556098 H3BRM9 83 aa7.63□□□□□ -1.19
CHGA-205ENST00000556098 Q6ZUT4 128 aa7.63□□□□□ -1.19
CHGA-205ENST00000556098 PLEKHB2Q96CS7 222 aa7.63□□□□□ -1.19
CHGA-205ENST00000556098 IGLV5-45A0A087WSX0 123 aa7.62□□□□□ -1.19
CHGA-205ENST00000556098 LOC100131303A0A0U1RQF7 123 aa7.62□□□□□ -1.19
CHGA-205ENST00000556098 F5H768 121 aa7.62□□□□□ -1.19
CHGA-205ENST00000556098 UBE2D1P51668 147 aa7.62□□□□□ -1.19
CHGA-205ENST00000556098 TAL2Q16559 108 aa7.62□□□□□ -1.19
CHGA-205ENST00000556098 TMEM170BQ5T4T1 132 aa7.62□□□□□ -1.19
CHGA-205ENST00000556098 C6orf223Q8N319 242 aa7.62□□□□□ -1.19
CHGA-205ENST00000556098 VSIG2Q96IQ7 327 aa7.62□□□□□ -1.19
CHGA-205ENST00000556098 GEMIN7Q9H840 131 aaKnown RBP7.62□□□□□ -1.19
CHGA-205ENST00000556098 CDC42SE2Q9NRR3 84 aa7.62□□□□□ -1.19
CHGA-205ENST00000556098 TMEM223A0PJW6 202 aa7.61□□□□□ -1.19
CHGA-205ENST00000556098 LEPROTO15243 131 aa7.61□□□□□ -1.19
CHGA-205ENST00000556098 ZNF22P17026 224 aaPredicted RBP7.61□□□□□ -1.19
CHGA-205ENST00000556098 CTAG1AP78358 180 aa7.61□□□□□ -1.19
CHGA-205ENST00000556098 HSD52Q0P140 79 aa7.61□□□□□ -1.19
CHGA-205ENST00000556098 FAM104AQ969W3 186 aa7.61□□□□□ -1.19
CHGA-205ENST00000556098 CHCHD5Q9BSY4 110 aa7.61□□□□□ -1.19
CHGA-205ENST00000556098 LELP1Q5T871 98 aa7.6□□□□□ -1.19
CHGA-205ENST00000556098 IGKV2D-26A0A0A0MRZ7 120 aa7.59□□□□□ -1.19
CHGA-205ENST00000556098 A0A0J9YXV3 536 aa7.59□□□□□ -1.19
CHGA-205ENST00000556098 NBDYA0A0U1RRE5 68 aa7.59□□□□□ -1.19
CHGA-205ENST00000556098 MYMXA0A1B0GTQ4 84 aa7.59□□□□□ -1.19
CHGA-205ENST00000556098 C2orf91Q6ZV80 131 aa7.59□□□□□ -1.19
CHGA-205ENST00000556098 DEFB104AQ8WTQ1 72 aa7.59□□□□□ -1.19
CHGA-205ENST00000556098 OPRPNQ99935 248 aaPredicted RBP7.59□□□□□ -1.19
CHGA-205ENST00000556098 SNHG12Q9BXW3 62 aa7.59□□□□□ -1.19
CHGA-205ENST00000556098 TRAV8-6A0A0B4J262 113 aa7.58□□□□□ -1.2
CHGA-205ENST00000556098 IGHV1-58A0A0C4DH39 117 aa7.58□□□□□ -1.2
CHGA-205ENST00000556098 EPM2AB3EWF7 344 aa7.58□□□□□ -1.2
CHGA-205ENST00000556098 LGALS3P17931 250 aaKnown RBP7.58□□□□□ -1.2
CHGA-205ENST00000556098 COL5A1-AS1Q5SY13 56 aa7.58□□□□□ -1.2
CHGA-205ENST00000556098 PCP2Q8IVA1 136 aa7.58□□□□□ -1.2
CHGA-205ENST00000556098 HERC1Q15751 4861 aa7.58□□□□□ -1.2
CHGA-205ENST00000556098 ZNF815PA8K554 130 aa7.57□□□□□ -1.2
CHGA-205ENST00000556098 J3QQQ9 107 aa7.57□□□□□ -1.2
CHGA-205ENST00000556098 INAFM2P0DMQ5 153 aa7.57□□□□□ -1.2
CHGA-205ENST00000556098 GAGE6Q13070 117 aa7.57□□□□□ -1.2
CHGA-205ENST00000556098 SFTA2Q6UW10 78 aa7.57□□□□□ -1.2
CHGA-205ENST00000556098 LINC01561Q8N1V8 128 aa7.57□□□□□ -1.2
CHGA-205ENST00000556098 LINC00469Q8N7U9 141 aa7.57□□□□□ -1.2
CHGA-205ENST00000556098 C15orf53Q8NAA6 179 aa7.57□□□□□ -1.2
CHGA-205ENST00000556098 APOBP04114 4563 aaKnown RBP7.56□□□□□ -1.2
CHGA-205ENST00000556098 LRP1BQ9NZR2 4599 aa7.56□□□□□ -1.2
CHGA-205ENST00000556098 A0A096LPF7 62 aa7.56□□□□□ -1.2
CHGA-205ENST00000556098 A0A0J9YY99 117 aa7.56□□□□□ -1.2
CHGA-205ENST00000556098 LINC00242Q5T6M2 205 aa7.56□□□□□ -1.2
CHGA-205ENST00000556098 A6NDN8 102 aa7.55□□□□□ -1.2
CHGA-205ENST00000556098 EREGO14944 169 aa7.55□□□□□ -1.2
CHGA-205ENST00000556098 GCSHP23434 173 aa7.55□□□□□ -1.2
CHGA-205ENST00000556098 CCL18P55774 89 aa7.55□□□□□ -1.2
CHGA-205ENST00000556098 SS18Q15532 418 aa7.55□□□□□ -1.2
CHGA-205ENST00000556098 SCGB1D4Q6XE38 83 aa7.55□□□□□ -1.2
CHGA-205ENST00000556098 SPANXB1Q9NS25 103 aaPredicted RBP7.55□□□□□ -1.2
CHGA-205ENST00000556098 IGLV5-39A0A0G2JS06 123 aa7.54□□□□□ -1.2
CHGA-205ENST00000556098 IGHV3-30-3P0DP02 117 aa7.54□□□□□ -1.2
CHGA-205ENST00000556098 FUSP35637 526 aaKnown RBP eCLIP7.54□□□□□ -1.2
CHGA-205ENST00000556098 KRTAP10-2P60368 255 aa7.54□□□□□ -1.2
CHGA-205ENST00000556098 RBX1P62877 108 aa7.54□□□□□ -1.2
CHGA-205ENST00000556098 MPV17L2Q567V2 206 aa7.54□□□□□ -1.2
CHGA-205ENST00000556098 BVES-AS1Q5T3Y7 98 aa7.54□□□□□ -1.2
CHGA-205ENST00000556098 Q6ZVH6 145 aa7.54□□□□□ -1.2
CHGA-205ENST00000556098 TRAV13-1A0A0B4J241 112 aa7.53□□□□□ -1.2
CHGA-205ENST00000556098 TMEM238LA0A1B0GVL6 79 aa7.53□□□□□ -1.2
CHGA-205ENST00000556098 A6NJY4 79 aa7.53□□□□□ -1.2
CHGA-205ENST00000556098 TMEM238C9JI98 176 aa7.53□□□□□ -1.2
CHGA-205ENST00000556098 TMEM262E9PQX1 116 aa7.53□□□□□ -1.2
CHGA-205ENST00000556098 HINT1P49773 126 aaPredicted RBP7.53□□□□□ -1.2
CHGA-205ENST00000556098 RNASE13Q5GAN3 156 aaKnown RBP7.53□□□□□ -1.2
CHGA-205ENST00000556098 ORAOV1Q8WV07 137 aa7.53□□□□□ -1.2
CHGA-205ENST00000556098 TM2D2Q9BX73 214 aa7.53□□□□□ -1.2
CHGA-205ENST00000556098 TP73-AS1Q9UF72 201 aa7.53□□□□□ -1.2
CHGA-205ENST00000556098 CDKN2A-AS1Q9UH64 79 aa7.53□□□□□ -1.2
CHGA-205ENST00000556098 LINC00588Q9Y4M8 146 aa7.53□□□□□ -1.2
CHGA-205ENST00000556098 IGLV4-60A0A075B6I1 120 aa7.52□□□□□ -1.21
CHGA-205ENST00000556098 TIMM17BO60830 172 aa7.52□□□□□ -1.21
CHGA-205ENST00000556098 COPS9Q8WXC6 57 aa7.52□□□□□ -1.21
CHGA-205ENST00000556098 LINC00959A0A1B0GUT2 108 aa7.51□□□□□ -1.21
CHGA-205ENST00000556098 NDUFA1O15239 70 aa7.51□□□□□ -1.21
CHGA-205ENST00000556098 HERV-K104P63124 156 aa7.51□□□□□ -1.21
CHGA-205ENST00000556098 BATFQ16520 125 aa7.51□□□□□ -1.21
CHGA-205ENST00000556098 LYPD5Q6UWN5 251 aa7.51□□□□□ -1.21
CHGA-205ENST00000556098 CEND1Q8N111 149 aa7.51□□□□□ -1.21
CHGA-205ENST00000556098 HIST1H4GQ99525 98 aa7.51□□□□□ -1.21
CHGA-205ENST00000556098 PPDPFQ9H3Y8 114 aa7.51□□□□□ -1.21
CHGA-205ENST00000556098 A0A087WZ39 114 aa7.5□□□□□ -1.21
CHGA-205ENST00000556098 TRAV8-4A0A0B4J246 113 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms