RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 VSIG2Q96IQ7 327 aa5.79□□□□□ -1.48
ATXN3-235ENST00000556082 KRTAP9-8Q9BYQ0 159 aa5.79□□□□□ -1.48
ATXN3-235ENST00000556082 GEMIN7Q9H840 131 aaKnown RBP5.79□□□□□ -1.48
ATXN3-235ENST00000556082 ATP5G1P05496 136 aa5.78□□□□□ -1.48
ATXN3-235ENST00000556082 SMIM13P0DJ93 91 aa5.78□□□□□ -1.48
ATXN3-235ENST00000556082 GCSHP23434 173 aa5.78□□□□□ -1.48
ATXN3-235ENST00000556082 TSPEAR-AS2P59090 65 aa5.78□□□□□ -1.48
ATXN3-235ENST00000556082 DAD1P61803 113 aa5.78□□□□□ -1.48
ATXN3-235ENST00000556082 LINC00242Q5T6M2 205 aa5.78□□□□□ -1.48
ATXN3-235ENST00000556082 AMMECR1LQ6DCA0 310 aa5.78□□□□□ -1.48
ATXN3-235ENST00000556082 SH2D6Q7Z4S9 175 aa5.78□□□□□ -1.48
ATXN3-235ENST00000556082 HIST1H4GQ99525 98 aa5.78□□□□□ -1.48
ATXN3-235ENST00000556082 IGLV5-39A0A0G2JS06 123 aa5.77□□□□□ -1.49
ATXN3-235ENST00000556082 A0A1B0GUV1 79 aa5.77□□□□□ -1.49
ATXN3-235ENST00000556082 A0A1B0GWB2 263 aa5.77□□□□□ -1.49
ATXN3-235ENST00000556082 IGHV3-30-3P0DP02 117 aa5.77□□□□□ -1.49
ATXN3-235ENST00000556082 FXYD2P54710 66 aa5.77□□□□□ -1.49
ATXN3-235ENST00000556082 RNASE13Q5GAN3 156 aaKnown RBP5.77□□□□□ -1.49
ATXN3-235ENST00000556082 SCGB1D4Q6XE38 83 aa5.77□□□□□ -1.49
ATXN3-235ENST00000556082 LINC00469Q8N7U9 141 aa5.77□□□□□ -1.49
ATXN3-235ENST00000556082 BAHCC1Q9P281 2608 aa5.76□□□□□ -1.49
ATXN3-235ENST00000556082 PTTG1IPP53801 180 aa5.76□□□□□ -1.49
ATXN3-235ENST00000556082 UBE2V1Q13404 147 aa5.76□□□□□ -1.49
ATXN3-235ENST00000556082 CDKN2A-AS1Q9UH64 79 aa5.76□□□□□ -1.49
ATXN3-235ENST00000556082 H3BNG1 76 aa5.75□□□□□ -1.49
ATXN3-235ENST00000556082 CCL25O15444 150 aa5.75□□□□□ -1.49
ATXN3-235ENST00000556082 TIMM17BO60830 172 aa5.75□□□□□ -1.49
ATXN3-235ENST00000556082 COX6A2Q02221 97 aa5.75□□□□□ -1.49
ATXN3-235ENST00000556082 GAGE6Q13070 117 aa5.75□□□□□ -1.49
ATXN3-235ENST00000556082 SRSF9Q13242 221 aaKnown RBP eCLIP5.75□□□□□ -1.49
ATXN3-235ENST00000556082 MRPL23Q16540 153 aaKnown RBP5.75□□□□□ -1.49
ATXN3-235ENST00000556082 C12orf74Q32Q52 190 aa5.75□□□□□ -1.49
ATXN3-235ENST00000556082 KRTAP15-1Q3LI76 137 aa5.75□□□□□ -1.49
ATXN3-235ENST00000556082 ZFAND6Q6FIF0 208 aa5.75□□□□□ -1.49
ATXN3-235ENST00000556082 Q6ZVH6 145 aa5.75□□□□□ -1.49
ATXN3-235ENST00000556082 CHCHD5Q9BSY4 110 aa5.75□□□□□ -1.49
ATXN3-235ENST00000556082 C11orf68Q9H3H3 251 aaKnown RBP5.75□□□□□ -1.49
ATXN3-235ENST00000556082 CELA1Q9UNI1 258 aa5.75□□□□□ -1.49
ATXN3-235ENST00000556082 TRAV8-3A0A0A6YYJ7 113 aa5.74□□□□□ -1.49
ATXN3-235ENST00000556082 TRAV13-1A0A0B4J241 112 aa5.74□□□□□ -1.49
ATXN3-235ENST00000556082 A0A0J9YXY3 114 aa5.74□□□□□ -1.49
ATXN3-235ENST00000556082 TMEM238C9JI98 176 aa5.74□□□□□ -1.49
ATXN3-235ENST00000556082 F5H768 121 aa5.74□□□□□ -1.49
ATXN3-235ENST00000556082 DEFB4AO15263 64 aa5.74□□□□□ -1.49
ATXN3-235ENST00000556082 IGHV3-30P01768 117 aa5.74□□□□□ -1.49
ATXN3-235ENST00000556082 SPINK8P0C7L1 97 aa5.74□□□□□ -1.49
ATXN3-235ENST00000556082 IGHV3-30-5P0DP03 117 aa5.74□□□□□ -1.49
ATXN3-235ENST00000556082 C10orf126Q8N4M7 172 aa5.74□□□□□ -1.49
ATXN3-235ENST00000556082 NDUFA12Q9UI09 145 aa5.74□□□□□ -1.49
ATXN3-235ENST00000556082 IGLV4-60A0A075B6I1 120 aa5.73□□□□□ -1.49
ATXN3-235ENST00000556082 K7EP13 123 aa5.73□□□□□ -1.49
ATXN3-235ENST00000556082 NDUFA1O15239 70 aa5.73□□□□□ -1.49
ATXN3-235ENST00000556082 VAMP3Q15836 100 aa5.73□□□□□ -1.49
ATXN3-235ENST00000556082 LINC01561Q8N1V8 128 aa5.73□□□□□ -1.49
ATXN3-235ENST00000556082 NHP2Q9NX24 153 aaKnown RBP5.73□□□□□ -1.49
ATXN3-235ENST00000556082 FBN1P35555 2871 aaKnown RBP5.73□□□□□ -1.49
ATXN3-235ENST00000556082 IGHV3-64A0A075B6Q5 118 aa5.72□□□□□ -1.49
ATXN3-235ENST00000556082 IGHV3OR16-9A0A0B4J2B5 98 aa5.72□□□□□ -1.49
ATXN3-235ENST00000556082 SMIM1B2RUZ4 78 aa5.72□□□□□ -1.49
ATXN3-235ENST00000556082 G3V4G9 280 aa5.72□□□□□ -1.49
ATXN3-235ENST00000556082 RBX1P62877 108 aa5.72□□□□□ -1.49
ATXN3-235ENST00000556082 KPRPQ5T749 579 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-235ENST00000556082 LITAFQ99732 161 aa5.72□□□□□ -1.49
ATXN3-235ENST00000556082 SPANXDQ9BXN6 97 aa5.72□□□□□ -1.49
ATXN3-235ENST00000556082 PPDPFQ9H3Y8 114 aa5.72□□□□□ -1.49
ATXN3-235ENST00000556082 SPANXCQ9NY87 97 aa5.72□□□□□ -1.49
ATXN3-235ENST00000556082 ICOSQ9Y6W8 199 aa5.72□□□□□ -1.49
ATXN3-235ENST00000556082 A0A087WZ39 114 aa5.71□□□□□ -1.5
ATXN3-235ENST00000556082 LINC00959A0A1B0GUT2 108 aa5.71□□□□□ -1.5
ATXN3-235ENST00000556082 A0A1W2PPM0 123 aa5.71□□□□□ -1.5
ATXN3-235ENST00000556082 IGLL5B9A064 214 aa5.71□□□□□ -1.5
ATXN3-235ENST00000556082 H3BUT2 72 aa5.71□□□□□ -1.5
ATXN3-235ENST00000556082 IFITM1P13164 125 aa5.71□□□□□ -1.5
ATXN3-235ENST00000556082 HERV-K104P63124 156 aa5.71□□□□□ -1.5
ATXN3-235ENST00000556082 RPL24P83731 157 aaKnown RBP5.71□□□□□ -1.5
ATXN3-235ENST00000556082 LELP1Q5T871 98 aa5.71□□□□□ -1.5
ATXN3-235ENST00000556082 GTF2H5Q6ZYL4 71 aa5.71□□□□□ -1.5
ATXN3-235ENST00000556082 TRRAPQ9Y4A5 3859 aa5.7□□□□□ -1.5
ATXN3-235ENST00000556082 A0A096LPF7 62 aa5.7□□□□□ -1.5
ATXN3-235ENST00000556082 TMEM262E9PQX1 116 aa5.7□□□□□ -1.5
ATXN3-235ENST00000556082 K7ERJ3 54 aa5.7□□□□□ -1.5
ATXN3-235ENST00000556082 FABP2P12104 132 aa5.7□□□□□ -1.5
ATXN3-235ENST00000556082 CIRBPQ14011 172 aaKnown RBP5.7□□□□□ -1.5
ATXN3-235ENST00000556082 SS18Q15532 418 aa5.7□□□□□ -1.5
ATXN3-235ENST00000556082 SFTA2Q6UW10 78 aa5.7□□□□□ -1.5
ATXN3-235ENST00000556082 RAB37Q96AX2 223 aa5.7□□□□□ -1.5
ATXN3-235ENST00000556082 ZNF625Q96I27 306 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-235ENST00000556082 NBEAL2Q6ZNJ1 2754 aa5.7□□□□□ -1.5
ATXN3-235ENST00000556082 STAB1Q9NY15 2570 aa5.69□□□□□ -1.5
ATXN3-235ENST00000556082 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-235ENST00000556082 GAGE10A6NGK3 116 aa5.69□□□□□ -1.5
ATXN3-235ENST00000556082 K7EP34 96 aa5.69□□□□□ -1.5
ATXN3-235ENST00000556082 MIAQ16674 131 aa5.69□□□□□ -1.5
ATXN3-235ENST00000556082 ADAMTSL4-AS1Q5T5F5 129 aa5.69□□□□□ -1.5
ATXN3-235ENST00000556082 MUSTN1Q8IVN3 82 aa5.69□□□□□ -1.5
ATXN3-235ENST00000556082 RETNQ9HD89 108 aa5.69□□□□□ -1.5
ATXN3-235ENST00000556082 A0A0B4J2C4 111 aa5.68□□□□□ -1.5
ATXN3-235ENST00000556082 A4D1N5 150 aa5.68□□□□□ -1.5
ATXN3-235ENST00000556082 CFC1BP0CG36 223 aa5.68□□□□□ -1.5
ATXN3-235ENST00000556082 CFC1P0CG37 223 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms