RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 WFDC10AQ9H1F0 79 aa7.04□□□□□ -1.28
RPGRIP1-208ENST00000555489 MT-ATP8P03928 68 aa7.03□□□□□ -1.28
RPGRIP1-208ENST00000555489 TLN2Q9Y4G6 2542 aa7.03□□□□□ -1.28
RPGRIP1-208ENST00000555489 ZNF469Q96JG9 3925 aaPredicted RBP7.03□□□□□ -1.28
RPGRIP1-208ENST00000555489 TRBV6-8A0A0A6YYG3 113 aa7.03□□□□□ -1.28
RPGRIP1-208ENST00000555489 AKAP9Q99996 3911 aa7.02□□□□□ -1.29
RPGRIP1-208ENST00000555489 COX7A2LO14548 114 aa7.02□□□□□ -1.29
RPGRIP1-208ENST00000555489 PF4P02776 101 aa7.02□□□□□ -1.29
RPGRIP1-208ENST00000555489 FHL2Q14192 279 aa7.02□□□□□ -1.29
RPGRIP1-208ENST00000555489 CLEC2BQ92478 149 aa7.02□□□□□ -1.29
RPGRIP1-208ENST00000555489 FLNAP21333 2647 aaKnown RBP7.01□□□□□ -1.29
RPGRIP1-208ENST00000555489 LOC100131303A0A0U1RQF7 123 aa7.01□□□□□ -1.29
RPGRIP1-208ENST00000555489 TEX49A0A1B0GTD5 131 aa7.01□□□□□ -1.29
RPGRIP1-208ENST00000555489 SHISA2Q6UWI4 295 aa7.01□□□□□ -1.29
RPGRIP1-208ENST00000555489 KIR2DL5BQ8NHK3 375 aa7.01□□□□□ -1.29
RPGRIP1-208ENST00000555489 SONP18583 2426 aaKnown RBP7.01□□□□□ -1.29
RPGRIP1-208ENST00000555489 SOSTDC1Q6X4U4 206 aa7.01□□□□□ -1.29
RPGRIP1-208ENST00000555489 COX7B2Q8TF08 81 aa7.01□□□□□ -1.29
RPGRIP1-208ENST00000555489 TRAV8-4A0A0B4J246 113 aa7□□□□□ -1.29
RPGRIP1-208ENST00000555489 A0A0U1RRA0 63 aa7□□□□□ -1.29
RPGRIP1-208ENST00000555489 CKS1BP61024 79 aa7□□□□□ -1.29
RPGRIP1-208ENST00000555489 FAM222AQ5U5X8 452 aa7□□□□□ -1.29
RPGRIP1-208ENST00000555489 TRAV13-2A0A0B4J235 113 aa7□□□□□ -1.29
RPGRIP1-208ENST00000555489 FAM240AA0A1B0GVK7 77 aa7□□□□□ -1.29
RPGRIP1-208ENST00000555489 GAGE6Q13070 117 aa7□□□□□ -1.29
RPGRIP1-208ENST00000555489 HIST2H2BCQ6DN03 193 aa7□□□□□ -1.29
RPGRIP1-208ENST00000555489 CHCHD5Q9BSY4 110 aa7□□□□□ -1.29
RPGRIP1-208ENST00000555489 WNK1Q9H4A3 2382 aa6.99□□□□□ -1.29
RPGRIP1-208ENST00000555489 SNCGO76070 127 aa6.99□□□□□ -1.29
RPGRIP1-208ENST00000555489 DEFB121Q5J5C9 76 aa6.99□□□□□ -1.29
RPGRIP1-208ENST00000555489 LINC00612Q8N6U2 182 aa6.99□□□□□ -1.29
RPGRIP1-208ENST00000555489 IGHV3OR16-9A0A0B4J2B5 98 aa6.98□□□□□ -1.29
RPGRIP1-208ENST00000555489 SMIM9A6NGZ8 99 aa6.98□□□□□ -1.29
RPGRIP1-208ENST00000555489 J3QKU1 62 aa6.98□□□□□ -1.29
RPGRIP1-208ENST00000555489 TRACP01848 142 aa6.98□□□□□ -1.29
RPGRIP1-208ENST00000555489 IGLV4-60A0A075B6I1 120 aa6.98□□□□□ -1.29
RPGRIP1-208ENST00000555489 A0A087WZ39 114 aa6.98□□□□□ -1.29
RPGRIP1-208ENST00000555489 MRPL23Q16540 153 aaKnown RBP6.98□□□□□ -1.29
RPGRIP1-208ENST00000555489 NF1P21359 2839 aa6.98□□□□□ -1.29
RPGRIP1-208ENST00000555489 IBA57-AS1B1ANH7 110 aa6.97□□□□□ -1.29
RPGRIP1-208ENST00000555489 CRPP02741 224 aa6.97□□□□□ -1.29
RPGRIP1-208ENST00000555489 PLA2G2AP14555 144 aa6.97□□□□□ -1.29
RPGRIP1-208ENST00000555489 LINC00482Q8N8I6 264 aa6.97□□□□□ -1.29
RPGRIP1-208ENST00000555489 CITED1Q99966 193 aa6.97□□□□□ -1.29
RPGRIP1-208ENST00000555489 CCDC168Q8NDH2 2452 aa6.97□□□□□ -1.29
RPGRIP1-208ENST00000555489 DEFB130BP0DP73 79 aa6.97□□□□□ -1.29
RPGRIP1-208ENST00000555489 DEFB130AP0DP74 79 aa6.97□□□□□ -1.29
RPGRIP1-208ENST00000555489 MIR7-3HGQ8N6C7 128 aa6.97□□□□□ -1.29
RPGRIP1-208ENST00000555489 TOMM7Q9P0U1 55 aa6.97□□□□□ -1.29
RPGRIP1-208ENST00000555489 PDZD2O15018 2839 aa6.96□□□□□ -1.29
RPGRIP1-208ENST00000555489 SETXQ7Z333 2677 aaKnown RBP6.96□□□□□ -1.3
RPGRIP1-208ENST00000555489 A0A1B0GUV1 79 aa6.96□□□□□ -1.3
RPGRIP1-208ENST00000555489 CRLF1O75462 422 aa6.96□□□□□ -1.3
RPGRIP1-208ENST00000555489 RPL28P46779 137 aaKnown RBP6.96□□□□□ -1.3
RPGRIP1-208ENST00000555489 Q6Q795 121 aa6.96□□□□□ -1.3
RPGRIP1-208ENST00000555489 IGKV3OR2-268A0A0C4DH90 116 aa6.95□□□□□ -1.3
RPGRIP1-208ENST00000555489 CFAP161Q6P656 301 aa6.95□□□□□ -1.3
RPGRIP1-208ENST00000555489 SND1-IT1Q9HBX3 110 aa6.95□□□□□ -1.3
RPGRIP1-208ENST00000555489 PRO0255Q9UI72 69 aa6.95□□□□□ -1.3
RPGRIP1-208ENST00000555489 LINC00959A0A1B0GUT2 108 aa6.95□□□□□ -1.3
RPGRIP1-208ENST00000555489 ACYP1P07311 99 aa6.95□□□□□ -1.3
RPGRIP1-208ENST00000555489 GYPEP15421 78 aa6.95□□□□□ -1.3
RPGRIP1-208ENST00000555489 LINC00158P58513 81 aa6.95□□□□□ -1.3
RPGRIP1-208ENST00000555489 GAGE2BQ13066 116 aa6.95□□□□□ -1.3
RPGRIP1-208ENST00000555489 GAGE2EQ4V326 116 aa6.95□□□□□ -1.3
RPGRIP1-208ENST00000555489 GAGE2DQ9UEU5 116 aa6.95□□□□□ -1.3
RPGRIP1-208ENST00000555489 TENM4Q6N022 2769 aa6.94□□□□□ -1.3
RPGRIP1-208ENST00000555489 LYRM9A8MSI8 78 aa6.94□□□□□ -1.3
RPGRIP1-208ENST00000555489 SS18Q15532 418 aa6.94□□□□□ -1.3
RPGRIP1-208ENST00000555489 LINC01561Q8N1V8 128 aa6.94□□□□□ -1.3
RPGRIP1-208ENST00000555489 TRAV26-1A0A087WT03 109 aa6.94□□□□□ -1.3
RPGRIP1-208ENST00000555489 C9orf66Q5T8R8 295 aa6.94□□□□□ -1.3
RPGRIP1-208ENST00000555489 X6R8D5 127 aa6.94□□□□□ -1.3
RPGRIP1-208ENST00000555489 CUBNO60494 3623 aa6.93□□□□□ -1.3
RPGRIP1-208ENST00000555489 NBPF19A0A087WUL8 3843 aa6.93□□□□□ -1.3
RPGRIP1-208ENST00000555489 KRTAP10-3P60369 221 aa6.93□□□□□ -1.3
RPGRIP1-208ENST00000555489 C15orf53Q8NAA6 179 aa6.93□□□□□ -1.3
RPGRIP1-208ENST00000555489 C5orf38Q86SI9 138 aa6.92□□□□□ -1.3
RPGRIP1-208ENST00000555489 IGKV2-28A0A075B6P5 120 aa6.92□□□□□ -1.3
RPGRIP1-208ENST00000555489 IGKV2D-28P01615 120 aa6.92□□□□□ -1.3
RPGRIP1-208ENST00000555489 C6orf226Q5I0X4 101 aa6.92□□□□□ -1.3
RPGRIP1-208ENST00000555489 Q8IZM0 81 aa6.92□□□□□ -1.3
RPGRIP1-208ENST00000555489 LINC00337Q8N6G1 96 aa6.92□□□□□ -1.3
RPGRIP1-208ENST00000555489 ANAPC13Q9BS18 74 aa6.92□□□□□ -1.3
RPGRIP1-208ENST00000555489 JMJD1CQ15652 2540 aa6.92□□□□□ -1.3
RPGRIP1-208ENST00000555489 H0YGX0 51 aa6.91□□□□□ -1.3
RPGRIP1-208ENST00000555489 CCL18P55774 89 aa6.91□□□□□ -1.3
RPGRIP1-208ENST00000555489 NOTCH3Q9UM47 2321 aa6.91□□□□□ -1.3
RPGRIP1-208ENST00000555489 NIPBLQ6KC79 2804 aaeCLIP6.91□□□□□ -1.3
RPGRIP1-208ENST00000555489 PAX4O43316 350 aa6.91□□□□□ -1.3
RPGRIP1-208ENST00000555489 BAALC-AS2P0C853 105 aa6.91□□□□□ -1.3
RPGRIP1-208ENST00000555489 INAFM2P0DMQ5 153 aa6.91□□□□□ -1.3
RPGRIP1-208ENST00000555489 APOC4P55056 127 aa6.91□□□□□ -1.3
RPGRIP1-208ENST00000555489 DNAL4O96015 105 aa6.9□□□□□ -1.3
RPGRIP1-208ENST00000555489 XCL1P47992 114 aa6.9□□□□□ -1.3
RPGRIP1-208ENST00000555489 TTC32Q5I0X7 151 aa6.9□□□□□ -1.3
RPGRIP1-208ENST00000555489 FAM218AQ96MZ4 157 aa6.9□□□□□ -1.3
RPGRIP1-208ENST00000555489 SMR3AQ99954 134 aa6.9□□□□□ -1.3
RPGRIP1-208ENST00000555489 SETD2Q9BYW2 2564 aaPredicted RBP6.9□□□□□ -1.31
RPGRIP1-208ENST00000555489 PFN2P35080 140 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms