RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 C2orf82Q6UX34 121 aa10.64□□□□□ -0.71
XRCC3-211ENST00000555055 TIMM21Q9BVV7 248 aa10.64□□□□□ -0.71
XRCC3-211ENST00000555055 TRAV25A0A0B4J276 109 aa10.63□□□□□ -0.71
XRCC3-211ENST00000555055 H7C2G1 150 aa10.63□□□□□ -0.71
XRCC3-211ENST00000555055 TIMM17BO60830 172 aa10.63□□□□□ -0.71
XRCC3-211ENST00000555055 IGLV1-51P01701 117 aa10.63□□□□□ -0.71
XRCC3-211ENST00000555055 H7C423 109 aa10.63□□□□□ -0.71
XRCC3-211ENST00000555055 MIAQ16674 131 aa10.63□□□□□ -0.71
XRCC3-211ENST00000555055 C19orf73Q9NVV2 129 aa10.63□□□□□ -0.71
XRCC3-211ENST00000555055 F8P00451 2351 aa10.62□□□□□ -0.71
XRCC3-211ENST00000555055 IGHV1-58A0A0C4DH39 117 aa10.62□□□□□ -0.71
XRCC3-211ENST00000555055 CCDC179H3BU77 68 aa10.62□□□□□ -0.71
XRCC3-211ENST00000555055 LINC00467Q9BRT7 94 aa10.62□□□□□ -0.71
XRCC3-211ENST00000555055 LST1O00453 97 aa10.62□□□□□ -0.71
XRCC3-211ENST00000555055 PF4P02776 101 aa10.62□□□□□ -0.71
XRCC3-211ENST00000555055 TRBV7-7A0A0K0K1E9 115 aa10.61□□□□□ -0.71
XRCC3-211ENST00000555055 A8MZ25 164 aa10.61□□□□□ -0.71
XRCC3-211ENST00000555055 CHCHD7Q9BUK0 85 aa10.61□□□□□ -0.71
XRCC3-211ENST00000555055 SPXQ9BT56 116 aa10.6□□□□□ -0.71
XRCC3-211ENST00000555055 LOC100131303A0A0U1RQF7 123 aa10.6□□□□□ -0.71
XRCC3-211ENST00000555055 TRAV8-3A0A0A6YYJ7 113 aa10.59□□□□□ -0.71
XRCC3-211ENST00000555055 TINCRA0A1B0GVN0 87 aa10.59□□□□□ -0.71
XRCC3-211ENST00000555055 RS1O15537 224 aa10.59□□□□□ -0.71
XRCC3-211ENST00000555055 NDUFA7O95182 113 aa10.59□□□□□ -0.71
XRCC3-211ENST00000555055 BEAN1Q3B7T3 259 aa10.59□□□□□ -0.71
XRCC3-211ENST00000555055 VSIG2Q96IQ7 327 aa10.59□□□□□ -0.71
XRCC3-211ENST00000555055 NDUFA12Q9UI09 145 aa10.59□□□□□ -0.71
XRCC3-211ENST00000555055 ACYP1P07311 99 aa10.58□□□□□ -0.72
XRCC3-211ENST00000555055 IMUPQ9GZP8 106 aa10.58□□□□□ -0.72
XRCC3-211ENST00000555055 LINC00694P0DN24 101 aa10.58□□□□□ -0.72
XRCC3-211ENST00000555055 LINC00482Q8N8I6 264 aa10.58□□□□□ -0.72
XRCC3-211ENST00000555055 PLAC8L1A1L4L8 177 aa10.57□□□□□ -0.72
XRCC3-211ENST00000555055 UBE2D4Q9Y2X8 147 aa10.57□□□□□ -0.72
XRCC3-211ENST00000555055 TRGV2A0A075B6R0 118 aa10.56□□□□□ -0.72
XRCC3-211ENST00000555055 PIK3CD-AS1Q5SR53 167 aa10.56□□□□□ -0.72
XRCC3-211ENST00000555055 ADAMTSL4-AS1Q5T5F5 129 aa10.56□□□□□ -0.72
XRCC3-211ENST00000555055 IL17DQ8TAD2 202 aa10.56□□□□□ -0.72
XRCC3-211ENST00000555055 PRSS2P07478 247 aa10.55□□□□□ -0.72
XRCC3-211ENST00000555055 CSNK1G2-AS1Q8NCQ2 148 aa10.55□□□□□ -0.72
XRCC3-211ENST00000555055 PKD1L1Q8TDX9 2849 aa10.55□□□□□ -0.72
XRCC3-211ENST00000555055 TMEM126AQ9H061 195 aa10.54□□□□□ -0.72
XRCC3-211ENST00000555055 NTM-AS1Q6ZSK4 140 aa10.54□□□□□ -0.72
XRCC3-211ENST00000555055 TMEM101Q96IK0 257 aa10.54□□□□□ -0.72
XRCC3-211ENST00000555055 STAB1Q9NY15 2570 aa10.53□□□□□ -0.72
XRCC3-211ENST00000555055 DEFB130BP0DP73 79 aa10.53□□□□□ -0.72
XRCC3-211ENST00000555055 DEFB130AP0DP74 79 aa10.53□□□□□ -0.72
XRCC3-211ENST00000555055 IGLV5-45A0A087WSX0 123 aa10.53□□□□□ -0.72
XRCC3-211ENST00000555055 DEFB4AO15263 64 aa10.53□□□□□ -0.72
XRCC3-211ENST00000555055 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.53□□□□□ -0.72
XRCC3-211ENST00000555055 K7EQD1 137 aa10.52□□□□□ -0.73
XRCC3-211ENST00000555055 NDUFA1O15239 70 aa10.52□□□□□ -0.73
XRCC3-211ENST00000555055 PPDPFQ9H3Y8 114 aa10.52□□□□□ -0.73
XRCC3-211ENST00000555055 TIRAPP58753 221 aa10.51□□□□□ -0.73
XRCC3-211ENST00000555055 COPS9Q8WXC6 57 aa10.51□□□□□ -0.73
XRCC3-211ENST00000555055 CLEC2BQ92478 149 aa10.51□□□□□ -0.73
XRCC3-211ENST00000555055 FBN1P35555 2871 aaKnown RBP10.51□□□□□ -0.73
XRCC3-211ENST00000555055 NPC2P61916 151 aa10.51□□□□□ -0.73
XRCC3-211ENST00000555055 MEIG1Q5JSS6 88 aa10.51□□□□□ -0.73
XRCC3-211ENST00000555055 DGAT2L7PQ6IED9 249 aa10.51□□□□□ -0.73
XRCC3-211ENST00000555055 COX6A2Q02221 97 aa10.5□□□□□ -0.73
XRCC3-211ENST00000555055 TRAV13-1A0A0B4J241 112 aa10.49□□□□□ -0.73
XRCC3-211ENST00000555055 ATP5G1P05496 136 aa10.49□□□□□ -0.73
XRCC3-211ENST00000555055 RPL36AP83881 106 aaKnown RBP10.49□□□□□ -0.73
XRCC3-211ENST00000555055 SDIM1Q6ZPB5 146 aa10.49□□□□□ -0.73
XRCC3-211ENST00000555055 RPL36ALQ969Q0 106 aaKnown RBP10.49□□□□□ -0.73
XRCC3-211ENST00000555055 ANK2Q01484 3957 aa10.49□□□□□ -0.73
XRCC3-211ENST00000555055 IGKV3OR2-268A0A0C4DH90 116 aa10.49□□□□□ -0.73
XRCC3-211ENST00000555055 CIRBPQ14011 172 aaKnown RBP10.49□□□□□ -0.73
XRCC3-211ENST00000555055 C16orf74Q96GX8 76 aa10.49□□□□□ -0.73
XRCC3-211ENST00000555055 DNAJC30Q96LL9 226 aa10.49□□□□□ -0.73
XRCC3-211ENST00000555055 CDKN2A-AS1Q9UH64 79 aa10.49□□□□□ -0.73
XRCC3-211ENST00000555055 TRGV4A0A0C4DH28 118 aa10.48□□□□□ -0.73
XRCC3-211ENST00000555055 COX7A2LO14548 114 aa10.48□□□□□ -0.73
XRCC3-211ENST00000555055 MAST4O15021 2626 aa10.47□□□□□ -0.73
XRCC3-211ENST00000555055 DAZ2Q13117 558 aaKnown RBP10.47□□□□□ -0.73
XRCC3-211ENST00000555055 LINC00643Q86TS7 51 aa10.47□□□□□ -0.73
XRCC3-211ENST00000555055 A0A096LPF7 62 aa10.47□□□□□ -0.73
XRCC3-211ENST00000555055 TRACP01848 142 aa10.47□□□□□ -0.73
XRCC3-211ENST00000555055 DAND5Q8N907 189 aa10.47□□□□□ -0.73
XRCC3-211ENST00000555055 IGLV5-39A0A0G2JS06 123 aa10.46□□□□□ -0.73
XRCC3-211ENST00000555055 FAM19A3Q7Z5A8 133 aa10.46□□□□□ -0.73
XRCC3-211ENST00000555055 A0A0U1RRA0 63 aa10.46□□□□□ -0.74
XRCC3-211ENST00000555055 FAM222AQ5U5X8 452 aa10.46□□□□□ -0.74
XRCC3-211ENST00000555055 ZNF625Q96I27 306 aaPredicted RBP10.46□□□□□ -0.74
XRCC3-211ENST00000555055 DEFB135Q30KP9 77 aa10.45□□□□□ -0.74
XRCC3-211ENST00000555055 LINC00308Q8TCZ7 52 aa10.45□□□□□ -0.74
XRCC3-211ENST00000555055 CXCL5P42830 114 aa10.44□□□□□ -0.74
XRCC3-211ENST00000555055 CMC4P56277 68 aaPredicted RBP10.44□□□□□ -0.74
XRCC3-211ENST00000555055 CHCHD5Q9BSY4 110 aa10.44□□□□□ -0.74
XRCC3-211ENST00000555055 FHL2Q14192 279 aa10.43□□□□□ -0.74
XRCC3-211ENST00000555055 HERVK_113P63121 156 aa10.43□□□□□ -0.74
XRCC3-211ENST00000555055 LINC00242Q5T6M2 205 aa10.43□□□□□ -0.74
XRCC3-211ENST00000555055 FAM236AA0A1B0GUQ0 79 aa10.42□□□□□ -0.74
XRCC3-211ENST00000555055 FAM236BA0A1B0GV22 79 aa10.42□□□□□ -0.74
XRCC3-211ENST00000555055 X6R8D5 127 aa10.42□□□□□ -0.74
XRCC3-211ENST00000555055 TRBV10-1A0A0K0K1A3 114 aa10.41□□□□□ -0.74
XRCC3-211ENST00000555055 DAZ4Q86SG3 579 aaKnown RBP10.41□□□□□ -0.74
XRCC3-211ENST00000555055 C3orf56Q8N813 242 aa10.41□□□□□ -0.74
XRCC3-211ENST00000555055 DAZ3Q9NR90 486 aaKnown RBP10.41□□□□□ -0.74
XRCC3-211ENST00000555055 NOTCH1P46531 2555 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms