RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 UBE2D3P61077 147 aa8.42□□□□□ -1.06
RIPK3-204ENST00000554756 UBE2D2P62837 147 aa8.42□□□□□ -1.06
RIPK3-204ENST00000554756 SRSF9Q13242 221 aaKnown RBP eCLIP8.42□□□□□ -1.06
RIPK3-204ENST00000554756 DEFB104AQ8WTQ1 72 aa8.42□□□□□ -1.06
RIPK3-204ENST00000554756 FAM104AQ969W3 186 aa8.42□□□□□ -1.06
RIPK3-204ENST00000554756 GTSF1LQ9H1H1 148 aa8.42□□□□□ -1.06
RIPK3-204ENST00000554756 STARD9Q9P2P6 4700 aa8.42□□□□□ -1.06
RIPK3-204ENST00000554756 TIRAPP58753 221 aa8.41□□□□□ -1.06
RIPK3-204ENST00000554756 FAM19A3Q7Z5A8 133 aa8.41□□□□□ -1.06
RIPK3-204ENST00000554756 PRO0255Q9UI72 69 aa8.41□□□□□ -1.06
RIPK3-204ENST00000554756 DNAH7Q8WXX0 4024 aa8.41□□□□□ -1.06
RIPK3-204ENST00000554756 UBE2D1P51668 147 aa8.4□□□□□ -1.06
RIPK3-204ENST00000554756 TSPEAR-AS2P59090 65 aa8.4□□□□□ -1.06
RIPK3-204ENST00000554756 UBE2DNLQ8IWF7 75 aa8.4□□□□□ -1.06
RIPK3-204ENST00000554756 IGLV5-45A0A087WSX0 123 aa8.4□□□□□ -1.07
RIPK3-204ENST00000554756 IGHV1-58A0A0C4DH39 117 aa8.4□□□□□ -1.07
RIPK3-204ENST00000554756 TMEM238C9JI98 176 aa8.4□□□□□ -1.07
RIPK3-204ENST00000554756 H3BNG1 76 aa8.4□□□□□ -1.07
RIPK3-204ENST00000554756 DGAT2L7PQ6IED9 249 aa8.4□□□□□ -1.07
RIPK3-204ENST00000554756 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.39□□□□□ -1.07
RIPK3-204ENST00000554756 LOC100131303A0A0U1RQF7 123 aa8.39□□□□□ -1.07
RIPK3-204ENST00000554756 IGKV2-29A2NJV5 120 aaPredicted RBP8.39□□□□□ -1.07
RIPK3-204ENST00000554756 K7ERJ3 54 aa8.39□□□□□ -1.07
RIPK3-204ENST00000554756 LYRM7Q5U5X0 104 aa8.39□□□□□ -1.07
RIPK3-204ENST00000554756 Q6ZUT4 128 aa8.39□□□□□ -1.07
RIPK3-204ENST00000554756 Q9UF83 564 aa8.39□□□□□ -1.07
RIPK3-204ENST00000554756 A0A096LPF7 62 aa8.38□□□□□ -1.07
RIPK3-204ENST00000554756 IGHV3-30P01768 117 aa8.38□□□□□ -1.07
RIPK3-204ENST00000554756 IGHV3-30-5P0DP03 117 aa8.38□□□□□ -1.07
RIPK3-204ENST00000554756 GYPEP15421 78 aa8.38□□□□□ -1.07
RIPK3-204ENST00000554756 HERVK_113P63121 156 aa8.38□□□□□ -1.07
RIPK3-204ENST00000554756 GEMIN7Q9H840 131 aaKnown RBP8.38□□□□□ -1.07
RIPK3-204ENST00000554756 ICOSQ9Y6W8 199 aa8.38□□□□□ -1.07
RIPK3-204ENST00000554756 IGHV3-38A0A0C4DH36 116 aa8.38□□□□□ -1.07
RIPK3-204ENST00000554756 IGHV3-30-3P0DP02 117 aa8.38□□□□□ -1.07
RIPK3-204ENST00000554756 TENM2Q9NT68 2774 aa8.37□□□□□ -1.07
RIPK3-204ENST00000554756 CSMD3Q7Z407 3707 aa8.37□□□□□ -1.07
RIPK3-204ENST00000554756 CCL18P55774 89 aa8.36□□□□□ -1.07
RIPK3-204ENST00000554756 RPL24P83731 157 aaKnown RBP8.36□□□□□ -1.07
RIPK3-204ENST00000554756 MRPL23Q16540 153 aaKnown RBP8.36□□□□□ -1.07
RIPK3-204ENST00000554756 ESRGQ1W209 222 aa8.36□□□□□ -1.07
RIPK3-204ENST00000554756 LINC00588Q9Y4M8 146 aa8.36□□□□□ -1.07
RIPK3-204ENST00000554756 TIMM17BO60830 172 aa8.35□□□□□ -1.07
RIPK3-204ENST00000554756 TMEM243Q9BU79 118 aa8.35□□□□□ -1.07
RIPK3-204ENST00000554756 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.35□□□□□ -1.07
RIPK3-204ENST00000554756 GAGE12JA6NER3 117 aa8.35□□□□□ -1.07
RIPK3-204ENST00000554756 K7ERU9 68 aa8.35□□□□□ -1.07
RIPK3-204ENST00000554756 LINC00694P0DN24 101 aa8.35□□□□□ -1.07
RIPK3-204ENST00000554756 GAGE4Q13068 117 aa8.35□□□□□ -1.07
RIPK3-204ENST00000554756 GAGE5Q13069 117 aa8.35□□□□□ -1.07
RIPK3-204ENST00000554756 GAGE13Q4V321 117 aa8.35□□□□□ -1.07
RIPK3-204ENST00000554756 TMEM101Q96IK0 257 aa8.35□□□□□ -1.07
RIPK3-204ENST00000554756 NAA38Q9BRA0 125 aaKnown RBP8.35□□□□□ -1.07
RIPK3-204ENST00000554756 RYR2Q92736 4967 aa8.34□□□□□ -1.07
RIPK3-204ENST00000554756 A0A0J9YXY3 114 aa8.34□□□□□ -1.07
RIPK3-204ENST00000554756 UBE2L6O14933 153 aa8.34□□□□□ -1.07
RIPK3-204ENST00000554756 NTM-AS1Q6ZSK4 140 aa8.34□□□□□ -1.07
RIPK3-204ENST00000554756 C10orf126Q8N4M7 172 aa8.34□□□□□ -1.07
RIPK3-204ENST00000554756 SPANXDQ9BXN6 97 aa8.34□□□□□ -1.07
RIPK3-204ENST00000554756 SPANXCQ9NY87 97 aa8.34□□□□□ -1.07
RIPK3-204ENST00000554756 DYNC2H1Q8NCM8 4307 aaKnown RBP8.34□□□□□ -1.07
RIPK3-204ENST00000554756 A0A0B4J2C4 111 aa8.33□□□□□ -1.08
RIPK3-204ENST00000554756 F8W1H4 67 aa8.33□□□□□ -1.08
RIPK3-204ENST00000554756 OCIAD2Q56VL3 154 aa8.33□□□□□ -1.08
RIPK3-204ENST00000554756 PGPEP1Q9NXJ5 209 aa8.33□□□□□ -1.08
RIPK3-204ENST00000554756 NDUFA12Q9UI09 145 aa8.33□□□□□ -1.08
RIPK3-204ENST00000554756 BIRC6Q9NR09 4857 aa8.33□□□□□ -1.08
RIPK3-204ENST00000554756 IGLV5-39A0A0G2JS06 123 aa8.33□□□□□ -1.08
RIPK3-204ENST00000554756 LYPD5Q6UWN5 251 aa8.33□□□□□ -1.08
RIPK3-204ENST00000554756 CDC42SE2Q9NRR3 84 aa8.33□□□□□ -1.08
RIPK3-204ENST00000554756 M0R2N4 97 aa8.32□□□□□ -1.08
RIPK3-204ENST00000554756 NDUFA1O15239 70 aa8.32□□□□□ -1.08
RIPK3-204ENST00000554756 RNASE13Q5GAN3 156 aaKnown RBP8.32□□□□□ -1.08
RIPK3-204ENST00000554756 LINC00242Q5T6M2 205 aa8.32□□□□□ -1.08
RIPK3-204ENST00000554756 CBY1Q9Y3M2 126 aa8.32□□□□□ -1.08
RIPK3-204ENST00000554756 IGHV3-64A0A075B6Q5 118 aa8.31□□□□□ -1.08
RIPK3-204ENST00000554756 IFITM1P13164 125 aa8.31□□□□□ -1.08
RIPK3-204ENST00000554756 CDKN2A-AS1Q9UH64 79 aa8.31□□□□□ -1.08
RIPK3-204ENST00000554756 PRO1854Q9UHT4 67 aa8.31□□□□□ -1.08
RIPK3-204ENST00000554756 PLECQ15149 4684 aaKnown RBP8.31□□□□□ -1.08
RIPK3-204ENST00000554756 TRBV20-1A0A075B6N2 111 aa8.3□□□□□ -1.08
RIPK3-204ENST00000554756 TRAV8-3A0A0A6YYJ7 113 aa8.3□□□□□ -1.08
RIPK3-204ENST00000554756 TSPAN13O95857 204 aa8.3□□□□□ -1.08
RIPK3-204ENST00000554756 CFC1BP0CG36 223 aa8.3□□□□□ -1.08
RIPK3-204ENST00000554756 CFC1P0CG37 223 aa8.3□□□□□ -1.08
RIPK3-204ENST00000554756 COPS9Q8WXC6 57 aa8.3□□□□□ -1.08
RIPK3-204ENST00000554756 LITAFQ99732 161 aa8.3□□□□□ -1.08
RIPK3-204ENST00000554756 PPDPFQ9H3Y8 114 aa8.3□□□□□ -1.08
RIPK3-204ENST00000554756 TRBV6-8A0A0A6YYG3 113 aa8.3□□□□□ -1.08
RIPK3-204ENST00000554756 APOMO95445 188 aa8.3□□□□□ -1.08
RIPK3-204ENST00000554756 SPINK8P0C7L1 97 aa8.3□□□□□ -1.08
RIPK3-204ENST00000554756 MIAQ16674 131 aa8.3□□□□□ -1.08
RIPK3-204ENST00000554756 SH2D6Q7Z4S9 175 aa8.3□□□□□ -1.08
RIPK3-204ENST00000554756 ATP6V0E2Q8NHE4 81 aa8.3□□□□□ -1.08
RIPK3-204ENST00000554756 A4D1N5 150 aa8.29□□□□□ -1.08
RIPK3-204ENST00000554756 CIRBPQ14011 172 aaKnown RBP8.29□□□□□ -1.08
RIPK3-204ENST00000554756 Q9H8V8 135 aa8.29□□□□□ -1.08
RIPK3-204ENST00000554756 RBX1P62877 108 aa8.28□□□□□ -1.08
RIPK3-204ENST00000554756 MUSTN1Q8IVN3 82 aa8.28□□□□□ -1.08
RIPK3-204ENST00000554756 UPK3BQ9BT76 320 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms