RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 FLNAP21333 2647 aaKnown RBP12.19□□□□□ -0.46
PPP4R3A-202ENST00000554390 B4DSR2 109 aa12.18□□□□□ -0.46
PPP4R3A-202ENST00000554390 CYSTM1Q9H1C7 97 aa12.18□□□□□ -0.46
PPP4R3A-202ENST00000554390 XCL2Q9UBD3 114 aa12.18□□□□□ -0.46
PPP4R3A-202ENST00000554390 HIST1H4AP62805 103 aaKnown RBP12.18□□□□□ -0.46
PPP4R3A-202ENST00000554390 Q9HAA7 133 aa12.18□□□□□ -0.46
PPP4R3A-202ENST00000554390 ATOX1O00244 68 aa12.18□□□□□ -0.46
PPP4R3A-202ENST00000554390 INAFM2P0DMQ5 153 aa12.18□□□□□ -0.46
PPP4R3A-202ENST00000554390 IGLV5-45A0A087WSX0 123 aa12.17□□□□□ -0.46
PPP4R3A-202ENST00000554390 RS1O15537 224 aa12.17□□□□□ -0.46
PPP4R3A-202ENST00000554390 ITPR3Q14573 2671 aa12.17□□□□□ -0.46
PPP4R3A-202ENST00000554390 TRAV13-1A0A0B4J241 112 aa12.16□□□□□ -0.46
PPP4R3A-202ENST00000554390 FAM222AQ5U5X8 452 aa12.16□□□□□ -0.46
PPP4R3A-202ENST00000554390 A0A1W2PRX2 142 aa12.15□□□□□ -0.46
PPP4R3A-202ENST00000554390 APCP25054 2843 aa12.15□□□□□ -0.46
PPP4R3A-202ENST00000554390 RPS28P62857 69 aaKnown RBP12.15□□□□□ -0.46
PPP4R3A-202ENST00000554390 PRB1P04280 392 aa12.15□□□□□ -0.47
PPP4R3A-202ENST00000554390 MALP21145 153 aa12.15□□□□□ -0.47
PPP4R3A-202ENST00000554390 IGKV3OR2-268A0A0C4DH90 116 aa12.14□□□□□ -0.47
PPP4R3A-202ENST00000554390 IGLV5-39A0A0G2JS06 123 aa12.14□□□□□ -0.47
PPP4R3A-202ENST00000554390 DGAT2L7PQ6IED9 249 aa12.14□□□□□ -0.47
PPP4R3A-202ENST00000554390 COPS9Q8WXC6 57 aa12.14□□□□□ -0.47
PPP4R3A-202ENST00000554390 PIK3CD-AS1Q5SR53 167 aa12.13□□□□□ -0.47
PPP4R3A-202ENST00000554390 PRIMA1Q86XR5 153 aa12.13□□□□□ -0.47
PPP4R3A-202ENST00000554390 PRORYQ9H606 182 aa12.13□□□□□ -0.47
PPP4R3A-202ENST00000554390 RPL18AQ02543 176 aaKnown RBP12.12□□□□□ -0.47
PPP4R3A-202ENST00000554390 LINC00242Q5T6M2 205 aa12.12□□□□□ -0.47
PPP4R3A-202ENST00000554390 OR13C6PQ8NH95 151 aa12.12□□□□□ -0.47
PPP4R3A-202ENST00000554390 KIR2DL5BQ8NHK3 375 aa12.12□□□□□ -0.47
PPP4R3A-202ENST00000554390 IGKV3D-7A0A0C4DH55 119 aa12.12□□□□□ -0.47
PPP4R3A-202ENST00000554390 PLA2G2AP14555 144 aa12.11□□□□□ -0.47
PPP4R3A-202ENST00000554390 USP24Q9UPU5 2620 aa12.11□□□□□ -0.47
PPP4R3A-202ENST00000554390 C9orf129Q5T035 196 aaKnown RBP12.11□□□□□ -0.47
PPP4R3A-202ENST00000554390 HIST2H2BCQ6DN03 193 aa12.11□□□□□ -0.47
PPP4R3A-202ENST00000554390 ZNF702PQ9H963 129 aa12.11□□□□□ -0.47
PPP4R3A-202ENST00000554390 SMIM1B2RUZ4 78 aa12.1□□□□□ -0.47
PPP4R3A-202ENST00000554390 DNAL4O96015 105 aa12.1□□□□□ -0.47
PPP4R3A-202ENST00000554390 KRTAP10-9P60411 292 aa12.09□□□□□ -0.47
PPP4R3A-202ENST00000554390 C14orf132Q9NPU4 83 aa12.09□□□□□ -0.47
PPP4R3A-202ENST00000554390 TRGV1A0A0A0MS02 117 aa12.09□□□□□ -0.47
PPP4R3A-202ENST00000554390 DPH3Q96FX2 82 aa12.09□□□□□ -0.47
PPP4R3A-202ENST00000554390 HIVEP2P31629 2446 aa12.08□□□□□ -0.48
PPP4R3A-202ENST00000554390 A0A087WVE0 104 aa12.08□□□□□ -0.48
PPP4R3A-202ENST00000554390 DYNLRB2Q8TF09 96 aa12.07□□□□□ -0.48
PPP4R3A-202ENST00000554390 MAP6D1Q9H9H5 199 aa12.07□□□□□ -0.48
PPP4R3A-202ENST00000554390 RPL28P46779 137 aaKnown RBP12.07□□□□□ -0.48
PPP4R3A-202ENST00000554390 SERP2Q8N6R1 65 aa12.07□□□□□ -0.48
PPP4R3A-202ENST00000554390 LINC00846Q9NV44 126 aa12.07□□□□□ -0.48
PPP4R3A-202ENST00000554390 RNF152Q8N8N0 203 aa12.06□□□□□ -0.48
PPP4R3A-202ENST00000554390 WFDC10AQ9H1F0 79 aa12.06□□□□□ -0.48
PPP4R3A-202ENST00000554390 TMEM258P61165 79 aa12.06□□□□□ -0.48
PPP4R3A-202ENST00000554390 LINC01356Q8N9X3 169 aa12.06□□□□□ -0.48
PPP4R3A-202ENST00000554390 NOTCH2Q04721 2471 aa12.06□□□□□ -0.48
PPP4R3A-202ENST00000554390 A0A087WYN8 130 aa12.06□□□□□ -0.48
PPP4R3A-202ENST00000554390 UPK3BQ9BT76 320 aa12.06□□□□□ -0.48
PPP4R3A-202ENST00000554390 ZNF415Q09FC8 603 aa12.05□□□□□ -0.48
PPP4R3A-202ENST00000554390 C11orf72Q8NBR9 251 aa12.05□□□□□ -0.48
PPP4R3A-202ENST00000554390 DSCR8Q96T75 97 aa12.05□□□□□ -0.48
PPP4R3A-202ENST00000554390 TRAV13-2A0A0B4J235 113 aa12.05□□□□□ -0.48
PPP4R3A-202ENST00000554390 Q6ZTI0 123 aa12.05□□□□□ -0.48
PPP4R3A-202ENST00000554390 LINC00337Q8N6G1 96 aa12.05□□□□□ -0.48
PPP4R3A-202ENST00000554390 CRPP02741 224 aa12.04□□□□□ -0.48
PPP4R3A-202ENST00000554390 Q6JHZ5 121 aa12.04□□□□□ -0.48
PPP4R3A-202ENST00000554390 LOC100131303A0A0U1RQF7 123 aa12.04□□□□□ -0.48
PPP4R3A-202ENST00000554390 TMEM89A2RUT3 159 aa12.04□□□□□ -0.48
PPP4R3A-202ENST00000554390 OXTP01178 125 aa12.04□□□□□ -0.48
PPP4R3A-202ENST00000554390 CR1P17927 2039 aa12.04□□□□□ -0.48
PPP4R3A-202ENST00000554390 LINC01561Q8N1V8 128 aa12.03□□□□□ -0.48
PPP4R3A-202ENST00000554390 PF4P02776 101 aa12.03□□□□□ -0.48
PPP4R3A-202ENST00000554390 TOMM7Q9P0U1 55 aa12.02□□□□□ -0.49
PPP4R3A-202ENST00000554390 VWFP04275 2813 aa12.02□□□□□ -0.49
PPP4R3A-202ENST00000554390 USP17L23D6RBM5 183 aa12.02□□□□□ -0.49
PPP4R3A-202ENST00000554390 F5H768 121 aa12.02□□□□□ -0.49
PPP4R3A-202ENST00000554390 ITPR2Q14571 2701 aa12.02□□□□□ -0.49
PPP4R3A-202ENST00000554390 IGKV2-28A0A075B6P5 120 aa12.01□□□□□ -0.49
PPP4R3A-202ENST00000554390 IGKV2D-28P01615 120 aa12.01□□□□□ -0.49
PPP4R3A-202ENST00000554390 NTM-AS1Q6ZSK4 140 aa12.01□□□□□ -0.49
PPP4R3A-202ENST00000554390 SMIM11BQ8TCY0 68 aa12.01□□□□□ -0.49
PPP4R3A-202ENST00000554390 WIPF1O43516 503 aa12□□□□□ -0.49
PPP4R3A-202ENST00000554390 FAM19A3Q7Z5A8 133 aa12□□□□□ -0.49
PPP4R3A-202ENST00000554390 MIR7-3HGQ8N6C7 128 aa12□□□□□ -0.49
PPP4R3A-202ENST00000554390 Q96MF0 132 aa12□□□□□ -0.49
PPP4R3A-202ENST00000554390 OVOL2Q9BRP0 275 aa12□□□□□ -0.49
PPP4R3A-202ENST00000554390 SND1-IT1Q9HBX3 110 aa12□□□□□ -0.49
PPP4R3A-202ENST00000554390 C4orf26Q17RF5 130 aa11.99□□□□□ -0.49
PPP4R3A-202ENST00000554390 ODF3L2Q3SX64 289 aa11.99□□□□□ -0.49
PPP4R3A-202ENST00000554390 OBSCN-AS1Q96MR7 158 aa11.99□□□□□ -0.49
PPP4R3A-202ENST00000554390 C11orf68Q9H3H3 251 aaKnown RBP11.99□□□□□ -0.49
PPP4R3A-202ENST00000554390 NCR3O14931 201 aa11.99□□□□□ -0.49
PPP4R3A-202ENST00000554390 Q6YL49 198 aa11.99□□□□□ -0.49
PPP4R3A-202ENST00000554390 C1orf158Q8N1D5 194 aa11.98□□□□□ -0.49
PPP4R3A-202ENST00000554390 NOP10Q9NPE3 64 aaKnown RBP11.98□□□□□ -0.49
PPP4R3A-202ENST00000554390 A0A096LNT2 108 aa11.97□□□□□ -0.49
PPP4R3A-202ENST00000554390 TRAV25A0A0B4J276 109 aa11.97□□□□□ -0.49
PPP4R3A-202ENST00000554390 INSP01308 110 aa11.97□□□□□ -0.49
PPP4R3A-202ENST00000554390 DEFB114Q30KQ6 69 aa11.97□□□□□ -0.49
PPP4R3A-202ENST00000554390 LECT2O14960 151 aa11.97□□□□□ -0.49
PPP4R3A-202ENST00000554390 RPL35AP18077 110 aaKnown RBP11.96□□□□□ -0.49
PPP4R3A-202ENST00000554390 STHQ8IWL8 128 aa11.96□□□□□ -0.49
PPP4R3A-202ENST00000554390 IGHV4-31P0DP07 118 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms