RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 CITO14578 2027 aa1.14□□□□□ -2.23
VRK1-202ENST00000553683 KIF20BQ96Q89 1820 aa1.14□□□□□ -2.23
VRK1-202ENST00000553683 MON2Q7Z3U7 1717 aa1.14□□□□□ -2.23
VRK1-202ENST00000553683 TRPM2O94759 1503 aa1.14□□□□□ -2.23
VRK1-202ENST00000553683 HIVEP1P15822 2718 aa1.14□□□□□ -2.23
VRK1-202ENST00000553683 MYH9P35579 1960 aaKnown RBP1.14□□□□□ -2.23
VRK1-202ENST00000553683 CUBNO60494 3623 aa1.14□□□□□ -2.23
VRK1-202ENST00000553683 RALGAPA2Q2PPJ7 1873 aa1.14□□□□□ -2.23
VRK1-202ENST00000553683 DOCK5Q9H7D0 1870 aa1.14□□□□□ -2.23
VRK1-202ENST00000553683 DOCK6Q96HP0 2047 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 ZANQ9Y493 2812 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 MYH4Q9Y623 1939 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 BTAF1O14981 1849 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 A0A0G2JMZ2 1700 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 XRN1Q8IZH2 1706 aaKnown RBP1.13□□□□□ -2.23
VRK1-202ENST00000553683 HIVEP3Q5T1R4 2406 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 IGLV3-32A0A0A0MS00 114 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 TRAV22A0A0B4J277 110 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 A0A0B4J2C4 111 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 TRBV10-2A0A0K0K1G8 114 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 TMEM30CPA0ZSE6 113 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 CRYM-AS1A6NIL9 109 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 HCG22E2RYF7 251 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 SLC25A20O43772 301 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 HMGA1P17096 107 aaKnown RBP1.13□□□□□ -2.23
VRK1-202ENST00000553683 UBE2D1P51668 147 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 CAV3P56539 151 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 FXYD7P58549 80 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 ZNF117Q03924 483 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 MIAQ16674 131 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 C9orf116Q5BN46 136 aaPredicted RBP1.13□□□□□ -2.23
VRK1-202ENST00000553683 C1orf134Q5TEV5 83 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 SPANXN1Q5VSR9 72 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 Q5VV11 94 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 DYNAPQ8N1N2 210 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 CNEP1R1Q8N9A8 125 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 IFI27L1Q96BM0 104 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 FAM167A-AS1Q96KT0 104 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 SCGB3A1Q96QR1 104 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 RETNLBQ9BQ08 111 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 TIMM21Q9BVV7 248 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 NHP2Q9NX24 153 aaKnown RBP1.13□□□□□ -2.23
VRK1-202ENST00000553683 UBE2D4Q9Y2X8 147 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 ANK1P16157 1881 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 NHSQ6T4R5 1651 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 ALS2Q96Q42 1657 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 MYH1P12882 1939 aa1.13□□□□□ -2.23
VRK1-202ENST00000553683 BSNQ9UPA5 3926 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 MEGF8Q7Z7M0 2845 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 MRC1P22897 1456 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 DOCK4Q8N1I0 1966 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 MED13LQ71F56 2210 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 PLXNA4Q9HCM2 1894 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 FCGBPQ9Y6R7 5405 aaPredicted RBP1.12□□□□□ -2.23
VRK1-202ENST00000553683 KDM3BQ7LBC6 1761 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 TRBV25-1A0A075B6N4 114 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 TRAV7A0A075B6U4 112 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 IGHV3-15A0A0B4J1V0 119 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 TEX49A0A1B0GTD5 131 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 A0A1B0GWA3 101 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 hDV103S1A0JD37 113 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 A8MWP4 228 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 C5orf67F2Z3F1 127 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 H3BMM0 161 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 H3BQ85 93 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 LECT2O14960 151 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 PSCAO43653 123 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 PPYP01298 95 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 IGHV1-69P01742 117 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 CLPSP04118 112 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 HMGN2P05204 90 aaKnown RBP1.12□□□□□ -2.23
VRK1-202ENST00000553683 MIFP14174 115 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 SMIM11AP58511 58 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 SNRPGP62308 76 aaKnown RBP1.12□□□□□ -2.23
VRK1-202ENST00000553683 SSBP1Q04837 148 aaKnown RBP1.12□□□□□ -2.23
VRK1-202ENST00000553683 Q6JHZ5 121 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 LYZL1Q6UWQ5 148 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 ZNF826PQ6ZT77 177 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 LYZL2Q7Z4W2 148 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 C20orf197Q8N268 126 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 Q8N6K4 173 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 DYNLRB2Q8TF09 96 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 UBE2WQ96B02 151 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 DYNLRB1Q9NP97 96 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 CDC42SE1Q9NRR8 79 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 PSENENQ9NZ42 101 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 ABRACLQ9P1F3 81 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 MYO18AQ92614 2054 aaKnown RBP1.12□□□□□ -2.23
VRK1-202ENST00000553683 MCM3APO60318 1980 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 POLEQ07864 2286 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 ICE1Q9Y2F5 2266 aa1.12□□□□□ -2.23
VRK1-202ENST00000553683 APCP25054 2843 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 MXRA5Q9NR99 2828 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 TECTAO75443 2155 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 PPLO60437 1756 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 UBR2Q8IWV8 1755 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 DYSFO75923 2080 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 TENM2Q9NT68 2774 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 ASXL3Q9C0F0 2248 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 VPS13CQ709C8 3753 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms