RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 C11orf68Q9H3H3 251 aaKnown RBP5.12□□□□□ -1.59
ATXN3-221ENST00000553498 FN1P02751 2386 aaKnown RBP5.12□□□□□ -1.59
ATXN3-221ENST00000553498 IGLV5-39A0A0G2JS06 123 aa5.11□□□□□ -1.59
ATXN3-221ENST00000553498 A0A0J9YXY3 114 aa5.11□□□□□ -1.59
ATXN3-221ENST00000553498 UBE2V1Q13404 147 aa5.11□□□□□ -1.59
ATXN3-221ENST00000553498 MRPL23Q16540 153 aaKnown RBP5.11□□□□□ -1.59
ATXN3-221ENST00000553498 LINC00242Q5T6M2 205 aa5.11□□□□□ -1.59
ATXN3-221ENST00000553498 ZFAND6Q6FIF0 208 aa5.11□□□□□ -1.59
ATXN3-221ENST00000553498 GTF2H5Q6ZYL4 71 aa5.11□□□□□ -1.59
ATXN3-221ENST00000553498 COPS9Q8WXC6 57 aa5.11□□□□□ -1.59
ATXN3-221ENST00000553498 CHCHD5Q9BSY4 110 aa5.11□□□□□ -1.59
ATXN3-221ENST00000553498 PPDPFQ9H3Y8 114 aa5.11□□□□□ -1.59
ATXN3-221ENST00000553498 LOC100131303A0A0U1RQF7 123 aa5.1□□□□□ -1.59
ATXN3-221ENST00000553498 FXYD2P54710 66 aa5.1□□□□□ -1.59
ATXN3-221ENST00000553498 TSPEAR-AS2P59090 65 aa5.1□□□□□ -1.59
ATXN3-221ENST00000553498 HERV-K104P63124 156 aa5.1□□□□□ -1.59
ATXN3-221ENST00000553498 VAMP3Q15836 100 aa5.1□□□□□ -1.59
ATXN3-221ENST00000553498 PRIMA1Q86XR5 153 aa5.1□□□□□ -1.59
ATXN3-221ENST00000553498 LINC01561Q8N1V8 128 aa5.1□□□□□ -1.59
ATXN3-221ENST00000553498 NDUFA12Q9UI09 145 aa5.1□□□□□ -1.59
ATXN3-221ENST00000553498 SETXQ7Z333 2677 aaKnown RBP5.1□□□□□ -1.59
ATXN3-221ENST00000553498 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-221ENST00000553498 NDUFA1O15239 70 aa5.09□□□□□ -1.59
ATXN3-221ENST00000553498 IGHV3-30P01768 117 aa5.09□□□□□ -1.59
ATXN3-221ENST00000553498 IGHV3-30-5P0DP03 117 aa5.09□□□□□ -1.59
ATXN3-221ENST00000553498 FABP2P12104 132 aa5.09□□□□□ -1.59
ATXN3-221ENST00000553498 IFITM1P13164 125 aa5.09□□□□□ -1.59
ATXN3-221ENST00000553498 KRTAP10-11P60412 298 aa5.09□□□□□ -1.59
ATXN3-221ENST00000553498 RPL24P83731 157 aaKnown RBP5.09□□□□□ -1.59
ATXN3-221ENST00000553498 CIRBPQ14011 172 aaKnown RBP5.09□□□□□ -1.59
ATXN3-221ENST00000553498 C12orf74Q32Q52 190 aa5.09□□□□□ -1.59
ATXN3-221ENST00000553498 LYRM7Q5U5X0 104 aa5.09□□□□□ -1.59
ATXN3-221ENST00000553498 SPANXDQ9BXN6 97 aa5.09□□□□□ -1.59
ATXN3-221ENST00000553498 SPANXCQ9NY87 97 aa5.09□□□□□ -1.59
ATXN3-221ENST00000553498 CDKN2A-AS1Q9UH64 79 aa5.09□□□□□ -1.59
ATXN3-221ENST00000553498 ICOSQ9Y6W8 199 aa5.09□□□□□ -1.59
ATXN3-221ENST00000553498 TRAV13-1A0A0B4J241 112 aa5.08□□□□□ -1.6
ATXN3-221ENST00000553498 A0A1W2PPM0 123 aa5.08□□□□□ -1.6
ATXN3-221ENST00000553498 GAGE6Q13070 117 aa5.08□□□□□ -1.6
ATXN3-221ENST00000553498 RNASE13Q5GAN3 156 aaKnown RBP5.08□□□□□ -1.6
ATXN3-221ENST00000553498 C10orf126Q8N4M7 172 aa5.08□□□□□ -1.6
ATXN3-221ENST00000553498 NHP2Q9NX24 153 aaKnown RBP5.08□□□□□ -1.6
ATXN3-221ENST00000553498 NIPBLQ6KC79 2804 aaeCLIP5.08□□□□□ -1.6
ATXN3-221ENST00000553498 C2CD3Q4AC94 2353 aa5.07□□□□□ -1.6
ATXN3-221ENST00000553498 A0A0B4J2C4 111 aa5.07□□□□□ -1.6
ATXN3-221ENST00000553498 GAGE10A6NGK3 116 aa5.07□□□□□ -1.6
ATXN3-221ENST00000553498 SMIM1B2RUZ4 78 aa5.07□□□□□ -1.6
ATXN3-221ENST00000553498 F5H768 121 aa5.07□□□□□ -1.6
ATXN3-221ENST00000553498 SPINK8P0C7L1 97 aa5.07□□□□□ -1.6
ATXN3-221ENST00000553498 SS18Q15532 418 aa5.07□□□□□ -1.6
ATXN3-221ENST00000553498 LELP1Q5T871 98 aa5.07□□□□□ -1.6
ATXN3-221ENST00000553498 A0A087WZ39 114 aa5.06□□□□□ -1.6
ATXN3-221ENST00000553498 TRAV8-3A0A0A6YYJ7 113 aa5.06□□□□□ -1.6
ATXN3-221ENST00000553498 IGHV3OR16-9A0A0B4J2B5 98 aa5.06□□□□□ -1.6
ATXN3-221ENST00000553498 TMEM262E9PQX1 116 aa5.06□□□□□ -1.6
ATXN3-221ENST00000553498 H3BUT2 72 aa5.06□□□□□ -1.6
ATXN3-221ENST00000553498 K7EP34 96 aa5.06□□□□□ -1.6
ATXN3-221ENST00000553498 RBX1P62877 108 aa5.06□□□□□ -1.6
ATXN3-221ENST00000553498 COX6A2Q02221 97 aa5.06□□□□□ -1.6
ATXN3-221ENST00000553498 MIAQ16674 131 aa5.06□□□□□ -1.6
ATXN3-221ENST00000553498 CELA1Q9UNI1 258 aa5.06□□□□□ -1.6
ATXN3-221ENST00000553498 AGRNO00468 2067 aa5.05□□□□□ -1.6
ATXN3-221ENST00000553498 IGLV4-60A0A075B6I1 120 aa5.05□□□□□ -1.6
ATXN3-221ENST00000553498 IGHV3-64A0A075B6Q5 118 aa5.05□□□□□ -1.6
ATXN3-221ENST00000553498 LINC00959A0A1B0GUT2 108 aa5.05□□□□□ -1.6
ATXN3-221ENST00000553498 IGLL5B9A064 214 aa5.05□□□□□ -1.6
ATXN3-221ENST00000553498 DEFB4AO15263 64 aa5.05□□□□□ -1.6
ATXN3-221ENST00000553498 KPRPQ5T749 579 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-221ENST00000553498 SVIPQ8NHG7 77 aa5.05□□□□□ -1.6
ATXN3-221ENST00000553498 RAB37Q96AX2 223 aa5.05□□□□□ -1.6
ATXN3-221ENST00000553498 ZNF625Q96I27 306 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-221ENST00000553498 LITAFQ99732 161 aa5.05□□□□□ -1.6
ATXN3-221ENST00000553498 WNK1Q9H4A3 2382 aa5.05□□□□□ -1.6
ATXN3-221ENST00000553498 A0A096LPF7 62 aa5.04□□□□□ -1.6
ATXN3-221ENST00000553498 G3V4G9 280 aa5.04□□□□□ -1.6
ATXN3-221ENST00000553498 K7EP13 123 aa5.04□□□□□ -1.6
ATXN3-221ENST00000553498 MALP21145 153 aa5.04□□□□□ -1.6
ATXN3-221ENST00000553498 COX7B2Q8TF08 81 aa5.04□□□□□ -1.6
ATXN3-221ENST00000553498 PRO1854Q9UHT4 67 aa5.04□□□□□ -1.6
ATXN3-221ENST00000553498 SPCS1Q9Y6A9 102 aa5.04□□□□□ -1.6
ATXN3-221ENST00000553498 TRBV20-1A0A075B6N2 111 aa5.03□□□□□ -1.6
ATXN3-221ENST00000553498 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
ATXN3-221ENST00000553498 K7ERJ3 54 aa5.03□□□□□ -1.6
ATXN3-221ENST00000553498 CXCL5P42830 114 aa5.03□□□□□ -1.6
ATXN3-221ENST00000553498 CD164L2Q6UWJ8 174 aa5.03□□□□□ -1.6
ATXN3-221ENST00000553498 MUSTN1Q8IVN3 82 aa5.03□□□□□ -1.6
ATXN3-221ENST00000553498 Q9H8V8 135 aa5.03□□□□□ -1.6
ATXN3-221ENST00000553498 TRAV8-4A0A0B4J246 113 aa5.02□□□□□ -1.61
ATXN3-221ENST00000553498 A4D1N5 150 aa5.02□□□□□ -1.61
ATXN3-221ENST00000553498 IBA57-AS1B1ANH7 110 aa5.02□□□□□ -1.61
ATXN3-221ENST00000553498 PRSS2P07478 247 aa5.02□□□□□ -1.61
ATXN3-221ENST00000553498 CFC1BP0CG36 223 aa5.02□□□□□ -1.61
ATXN3-221ENST00000553498 CFC1P0CG37 223 aa5.02□□□□□ -1.61
ATXN3-221ENST00000553498 LYPD5Q6UWN5 251 aa5.02□□□□□ -1.61
ATXN3-221ENST00000553498 Q8IZM0 81 aa5.02□□□□□ -1.61
ATXN3-221ENST00000553498 C11orf45Q8TAV5 145 aa5.02□□□□□ -1.61
ATXN3-221ENST00000553498 MUC7Q8TAX7 377 aa5.02□□□□□ -1.61
ATXN3-221ENST00000553498 TM2D3Q9BRN9 247 aa5.02□□□□□ -1.61
ATXN3-221ENST00000553498 PRR34Q9NV39 138 aa5.02□□□□□ -1.61
ATXN3-221ENST00000553498 ERG28Q9UKR5 140 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms