RNA–Protein interactions for RNA: ENST00000552352.1

RPH3A-223, Transcript of rabphilin 3A, human

TSL 3

Gene RPH3A, Length 2,535 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPH3A-223	ENST00000552352	CSDC2	Q9Y534	153 aa	Known RBP	5.73	□□□□□ -1.49
RPH3A-223	ENST00000552352		F5H768	121 aa		5.72	□□□□□ -1.49
RPH3A-223	ENST00000552352	CHD6	Q8TD26	2715 aa		5.72	□□□□□ -1.49
RPH3A-223	ENST00000552352		Q9HAA7	133 aa		5.72	□□□□□ -1.49
RPH3A-223	ENST00000552352	KLK5	Q9Y337	293 aa	Predicted RBP	5.72	□□□□□ -1.49
RPH3A-223	ENST00000552352	SPG11	Q96JI7	2443 aa		5.71	□□□□□ -1.49
RPH3A-223	ENST00000552352	DNAL4	O96015	105 aa		5.71	□□□□□ -1.5
RPH3A-223	ENST00000552352	CRP	P02741	224 aa		5.71	□□□□□ -1.5
RPH3A-223	ENST00000552352	KRTAP1-1	Q07627	177 aa		5.71	□□□□□ -1.5
RPH3A-223	ENST00000552352	MYO18B	Q8IUG5	2567 aa		5.71	□□□□□ -1.5
RPH3A-223	ENST00000552352	FBN2	P35556	2912 aa		5.71	□□□□□ -1.5
RPH3A-223	ENST00000552352	TRAV13-1	A0A0B4J241	112 aa		5.71	□□□□□ -1.5
RPH3A-223	ENST00000552352	LOC107984640	A0A0U1RRK4	108 aa		5.71	□□□□□ -1.5
RPH3A-223	ENST00000552352	RPS28	P62857	69 aa	Known RBP	5.71	□□□□□ -1.5
RPH3A-223	ENST00000552352	WFDC11	Q8NEX6	87 aa		5.71	□□□□□ -1.5
RPH3A-223	ENST00000552352	C16orf95	Q9H693	158 aa		5.71	□□□□□ -1.5
RPH3A-223	ENST00000552352	KMT2B	Q9UMN6	2715 aa	Predicted RBP	5.7	□□□□□ -1.5
RPH3A-223	ENST00000552352	VPS13C	Q709C8	3753 aa		5.7	□□□□□ -1.5
RPH3A-223	ENST00000552352	ANKRD17	O75179	2603 aa	Known RBP	5.7	□□□□□ -1.5
RPH3A-223	ENST00000552352	COL12A1	Q99715	3063 aa		5.7	□□□□□ -1.5
RPH3A-223	ENST00000552352	RPL18A	Q02543	176 aa	Known RBP	5.7	□□□□□ -1.5
RPH3A-223	ENST00000552352	TRAV25	A0A0B4J276	109 aa		5.7	□□□□□ -1.5
RPH3A-223	ENST00000552352	DNAJC9-AS1	A6NH13	148 aa		5.7	□□□□□ -1.5
RPH3A-223	ENST00000552352	GHRH	P01286	108 aa		5.7	□□□□□ -1.5
RPH3A-223	ENST00000552352		Q6JHZ5	121 aa		5.7	□□□□□ -1.5
RPH3A-223	ENST00000552352	OBSCN-AS1	Q96MR7	158 aa		5.7	□□□□□ -1.5
RPH3A-223	ENST00000552352	CDC42SE2	Q9NRR3	84 aa		5.7	□□□□□ -1.5
RPH3A-223	ENST00000552352	INS	P01308	110 aa		5.69	□□□□□ -1.5
RPH3A-223	ENST00000552352	LINC00337	Q8N6G1	96 aa		5.69	□□□□□ -1.5
RPH3A-223	ENST00000552352	IGKV2-28	A0A075B6P5	120 aa		5.69	□□□□□ -1.5
RPH3A-223	ENST00000552352		A0A087WYN8	130 aa		5.69	□□□□□ -1.5
RPH3A-223	ENST00000552352	IGKV2D-28	P01615	120 aa		5.69	□□□□□ -1.5
RPH3A-223	ENST00000552352	RNASE1	P07998	156 aa	Known RBP	5.69	□□□□□ -1.5
RPH3A-223	ENST00000552352	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.69	□□□□□ -1.5
RPH3A-223	ENST00000552352	FAM208B	Q5VWN6	2430 aa		5.68	□□□□□ -1.5
RPH3A-223	ENST00000552352	TRBV10-1	A0A0K0K1A3	114 aa		5.68	□□□□□ -1.5
RPH3A-223	ENST00000552352	hADV29S1	A0JD25	119 aa		5.68	□□□□□ -1.5
RPH3A-223	ENST00000552352		H0YGX0	51 aa		5.68	□□□□□ -1.5
RPH3A-223	ENST00000552352	RPL36A	P83881	106 aa	Known RBP	5.68	□□□□□ -1.5
RPH3A-223	ENST00000552352	C5orf47	Q569G3	176 aa		5.68	□□□□□ -1.5
RPH3A-223	ENST00000552352	NTM-AS1	Q6ZSK4	140 aa		5.68	□□□□□ -1.5
RPH3A-223	ENST00000552352	RPL36AL	Q969Q0	106 aa	Known RBP	5.68	□□□□□ -1.5
RPH3A-223	ENST00000552352	SND1-IT1	Q9HBX3	110 aa		5.68	□□□□□ -1.5
RPH3A-223	ENST00000552352	LRRK2	Q5S007	2527 aa		5.68	□□□□□ -1.5
RPH3A-223	ENST00000552352		K7EQD1	137 aa		5.68	□□□□□ -1.5
RPH3A-223	ENST00000552352	SLURP1	P55000	103 aa		5.68	□□□□□ -1.5
RPH3A-223	ENST00000552352	MIR7-3HG	Q8N6C7	128 aa		5.68	□□□□□ -1.5
RPH3A-223	ENST00000552352	SMIM11B	Q8TCY0	68 aa		5.68	□□□□□ -1.5
RPH3A-223	ENST00000552352	MAP6D1	Q9H9H5	199 aa		5.68	□□□□□ -1.5
RPH3A-223	ENST00000552352	C14orf132	Q9NPU4	83 aa		5.68	□□□□□ -1.5
RPH3A-223	ENST00000552352	CSPG4	Q6UVK1	2322 aa		5.67	□□□□□ -1.5
RPH3A-223	ENST00000552352	PTPN13	Q12923	2485 aa		5.67	□□□□□ -1.5
RPH3A-223	ENST00000552352	SMIM9	A6NGZ8	99 aa		5.67	□□□□□ -1.5
RPH3A-223	ENST00000552352	TMEM258	P61165	79 aa		5.67	□□□□□ -1.5
RPH3A-223	ENST00000552352	C9orf129	Q5T035	196 aa	Known RBP	5.67	□□□□□ -1.5
RPH3A-223	ENST00000552352	SERP2	Q8N6R1	65 aa		5.67	□□□□□ -1.5
RPH3A-223	ENST00000552352	IL17D	Q8TAD2	202 aa		5.67	□□□□□ -1.5
RPH3A-223	ENST00000552352	LINC00846	Q9NV44	126 aa		5.67	□□□□□ -1.5
RPH3A-223	ENST00000552352	NAV2	Q8IVL1	2488 aa		5.67	□□□□□ -1.5
RPH3A-223	ENST00000552352	COX7B2	Q8TF08	81 aa		5.67	□□□□□ -1.5
RPH3A-223	ENST00000552352	SORL1	Q92673	2214 aa		5.67	□□□□□ -1.5
RPH3A-223	ENST00000552352	IGKV3D-7	A0A0C4DH55	119 aa		5.66	□□□□□ -1.5
RPH3A-223	ENST00000552352	DEFB114	Q30KQ6	69 aa		5.66	□□□□□ -1.5
RPH3A-223	ENST00000552352	C18orf65	Q6ZTR6	163 aa		5.66	□□□□□ -1.5
RPH3A-223	ENST00000552352	MDFI	Q99750	246 aa		5.66	□□□□□ -1.5
RPH3A-223	ENST00000552352	UPK3B	Q9BT76	320 aa		5.66	□□□□□ -1.5
RPH3A-223	ENST00000552352	CYSTM1	Q9H1C7	97 aa		5.66	□□□□□ -1.5
RPH3A-223	ENST00000552352	ESM1	Q9NQ30	184 aa		5.66	□□□□□ -1.5
RPH3A-223	ENST00000552352	CREBBP	Q92793	2442 aa		5.66	□□□□□ -1.5
RPH3A-223	ENST00000552352	TRGV1	A0A0A0MS02	117 aa		5.66	□□□□□ -1.5
RPH3A-223	ENST00000552352	OR13C6P	Q8NH95	151 aa		5.66	□□□□□ -1.5
RPH3A-223	ENST00000552352	USP9Y	O00507	2555 aa	Predicted RBP	5.65	□□□□□ -1.5
RPH3A-223	ENST00000552352	UBE2L6	O14933	153 aa		5.65	□□□□□ -1.5
RPH3A-223	ENST00000552352	CRYBG3	Q68DQ2	2970 aa		5.65	□□□□□ -1.51
RPH3A-223	ENST00000552352	LECT2	O14960	151 aa		5.65	□□□□□ -1.51
RPH3A-223	ENST00000552352	CMC4	P56277	68 aa	Predicted RBP	5.65	□□□□□ -1.51
RPH3A-223	ENST00000552352	DEFB136	Q30KP8	78 aa		5.65	□□□□□ -1.51
RPH3A-223	ENST00000552352	LINC01561	Q8N1V8	128 aa		5.65	□□□□□ -1.51
RPH3A-223	ENST00000552352	DYNLRB2	Q8TF09	96 aa		5.65	□□□□□ -1.51
RPH3A-223	ENST00000552352	TMEM243	Q9BU79	118 aa		5.65	□□□□□ -1.51
RPH3A-223	ENST00000552352		A0A087WVE0	104 aa		5.64	□□□□□ -1.51
RPH3A-223	ENST00000552352	USP17L23	D6RBM5	183 aa		5.64	□□□□□ -1.51
RPH3A-223	ENST00000552352	CCL18	P55774	89 aa		5.64	□□□□□ -1.51
RPH3A-223	ENST00000552352	LINC00158	P58513	81 aa		5.64	□□□□□ -1.51
RPH3A-223	ENST00000552352	HILS1	P60008	231 aa		5.64	□□□□□ -1.51
RPH3A-223	ENST00000552352	DPH3	Q96FX2	82 aa		5.64	□□□□□ -1.51
RPH3A-223	ENST00000552352	IBA57-AS1	B1ANH7	110 aa		5.64	□□□□□ -1.51
RPH3A-223	ENST00000552352	NCR3	O14931	201 aa		5.64	□□□□□ -1.51
RPH3A-223	ENST00000552352	LCE2C	Q5TA81	110 aa		5.64	□□□□□ -1.51
RPH3A-223	ENST00000552352	XCL2	Q9UBD3	114 aa		5.64	□□□□□ -1.51
RPH3A-223	ENST00000552352	TOMM7	Q9P0U1	55 aa		5.63	□□□□□ -1.51
RPH3A-223	ENST00000552352	CCL24	O00175	119 aa		5.63	□□□□□ -1.51
RPH3A-223	ENST00000552352		Q6ZTI0	123 aa		5.63	□□□□□ -1.51
RPH3A-223	ENST00000552352	C1orf158	Q8N1D5	194 aa		5.63	□□□□□ -1.51
RPH3A-223	ENST00000552352	LINC01006	Q8NI28	216 aa		5.63	□□□□□ -1.51
RPH3A-223	ENST00000552352	UTP20	O75691	2785 aa	Known RBP	5.62	□□□□□ -1.51
RPH3A-223	ENST00000552352	LY6G6D	O95868	133 aa		5.62	□□□□□ -1.51
RPH3A-223	ENST00000552352	CCK	P06307	115 aa		5.62	□□□□□ -1.51
RPH3A-223	ENST00000552352	KIR2DL5B	Q8NHK3	375 aa		5.62	□□□□□ -1.51
RPH3A-223	ENST00000552352	ORMDL1	Q9P0S3	153 aa		5.62	□□□□□ -1.51

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