RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 MRPL23Q16540 153 aaKnown RBP10.1□□□□□ -0.79
SCN8A-207ENST00000551216 SMIM1B2RUZ4 78 aa10.09□□□□□ -0.79
SCN8A-207ENST00000551216 F5H768 121 aa10.09□□□□□ -0.79
SCN8A-207ENST00000551216 K7ERJ3 54 aa10.09□□□□□ -0.79
SCN8A-207ENST00000551216 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.08□□□□□ -0.8
SCN8A-207ENST00000551216 H3BNG1 76 aa10.08□□□□□ -0.8
SCN8A-207ENST00000551216 IFITM1P13164 125 aa10.08□□□□□ -0.8
SCN8A-207ENST00000551216 HERV-K104P63124 156 aa10.08□□□□□ -0.8
SCN8A-207ENST00000551216 CIRBPQ14011 172 aaKnown RBP10.08□□□□□ -0.8
SCN8A-207ENST00000551216 COPS9Q8WXC6 57 aa10.08□□□□□ -0.8
SCN8A-207ENST00000551216 C11orf68Q9H3H3 251 aaKnown RBP10.08□□□□□ -0.8
SCN8A-207ENST00000551216 DEFB4AO15263 64 aa10.07□□□□□ -0.8
SCN8A-207ENST00000551216 SFTA2Q6UW10 78 aa10.07□□□□□ -0.8
SCN8A-207ENST00000551216 LITAFQ99732 161 aa10.07□□□□□ -0.8
SCN8A-207ENST00000551216 PPDPFQ9H3Y8 114 aa10.07□□□□□ -0.8
SCN8A-207ENST00000551216 CELA1Q9UNI1 258 aa10.07□□□□□ -0.8
SCN8A-207ENST00000551216 IGLV4-60A0A075B6I1 120 aa10.07□□□□□ -0.8
SCN8A-207ENST00000551216 LINC01561Q8N1V8 128 aa10.07□□□□□ -0.8
SCN8A-207ENST00000551216 SPCS1Q9Y6A9 102 aa10.07□□□□□ -0.8
SCN8A-207ENST00000551216 A0A0B4J2C4 111 aa10.06□□□□□ -0.8
SCN8A-207ENST00000551216 MIAQ16674 131 aa10.06□□□□□ -0.8
SCN8A-207ENST00000551216 LYRM7Q5U5X0 104 aa10.06□□□□□ -0.8
SCN8A-207ENST00000551216 ICOSQ9Y6W8 199 aa10.06□□□□□ -0.8
SCN8A-207ENST00000551216 IGHV3OR16-9A0A0B4J2B5 98 aa10.05□□□□□ -0.8
SCN8A-207ENST00000551216 RBX1P62877 108 aa10.05□□□□□ -0.8
SCN8A-207ENST00000551216 A0A087WZ39 114 aa10.04□□□□□ -0.8
SCN8A-207ENST00000551216 CFC1BP0CG36 223 aa10.04□□□□□ -0.8
SCN8A-207ENST00000551216 CFC1P0CG37 223 aa10.04□□□□□ -0.8
SCN8A-207ENST00000551216 PRO1854Q9UHT4 67 aa10.04□□□□□ -0.8
SCN8A-207ENST00000551216 LINC00959A0A1B0GUT2 108 aa10.04□□□□□ -0.8
SCN8A-207ENST00000551216 TMEM262E9PQX1 116 aa10.04□□□□□ -0.8
SCN8A-207ENST00000551216 SS18Q15532 418 aa10.04□□□□□ -0.8
SCN8A-207ENST00000551216 LELP1Q5T871 98 aa10.04□□□□□ -0.8
SCN8A-207ENST00000551216 MUSTN1Q8IVN3 82 aa10.04□□□□□ -0.8
SCN8A-207ENST00000551216 ZNF625Q96I27 306 aaPredicted RBP10.04□□□□□ -0.8
SCN8A-207ENST00000551216 A4D1N5 150 aa10.03□□□□□ -0.8
SCN8A-207ENST00000551216 Q9H8V8 135 aa10.03□□□□□ -0.8
SCN8A-207ENST00000551216 PGPEP1Q9NXJ5 209 aa10.03□□□□□ -0.8
SCN8A-207ENST00000551216 APOMO95445 188 aa10.01□□□□□ -0.81
SCN8A-207ENST00000551216 NAA38Q9BRA0 125 aaKnown RBP10.01□□□□□ -0.81
SCN8A-207ENST00000551216 PRSS2P07478 247 aa10□□□□□ -0.81
SCN8A-207ENST00000551216 ADAMTSL4-AS1Q5T5F5 129 aa10□□□□□ -0.81
SCN8A-207ENST00000551216 COX7B2Q8TF08 81 aa10□□□□□ -0.81
SCN8A-207ENST00000551216 TRRAPQ9Y4A5 3859 aa10□□□□□ -0.81
SCN8A-207ENST00000551216 NBEAL2Q6ZNJ1 2754 aa10□□□□□ -0.81
SCN8A-207ENST00000551216 TSPAN13O95857 204 aa10□□□□□ -0.81
SCN8A-207ENST00000551216 A0A096LPF7 62 aa9.99□□□□□ -0.81
SCN8A-207ENST00000551216 G3V4G9 280 aa9.99□□□□□ -0.81
SCN8A-207ENST00000551216 FBN1P35555 2871 aaKnown RBP9.99□□□□□ -0.81
SCN8A-207ENST00000551216 TRBV20-1A0A075B6N2 111 aa9.98□□□□□ -0.81
SCN8A-207ENST00000551216 F8W1H4 67 aa9.97□□□□□ -0.81
SCN8A-207ENST00000551216 HTN3P15516 51 aa9.97□□□□□ -0.81
SCN8A-207ENST00000551216 CD164L2Q6UWJ8 174 aa9.97□□□□□ -0.81
SCN8A-207ENST00000551216 STAB1Q9NY15 2570 aa9.97□□□□□ -0.81
SCN8A-207ENST00000551216 IGHV3-33P01772 117 aa9.96□□□□□ -0.81
SCN8A-207ENST00000551216 ERG28Q9UKR5 140 aa9.96□□□□□ -0.81
SCN8A-207ENST00000551216 IGKV3OR2-268A0A0C4DH90 116 aa9.96□□□□□ -0.82
SCN8A-207ENST00000551216 REG3AQ06141 175 aa9.96□□□□□ -0.82
SCN8A-207ENST00000551216 IBA57-AS1B1ANH7 110 aa9.95□□□□□ -0.82
SCN8A-207ENST00000551216 MEIG1Q5JSS6 88 aa9.95□□□□□ -0.82
SCN8A-207ENST00000551216 KPRPQ5T749 579 aaPredicted RBP9.95□□□□□ -0.82
SCN8A-207ENST00000551216 LYPD5Q6UWN5 251 aa9.95□□□□□ -0.82
SCN8A-207ENST00000551216 Q8IZM0 81 aa9.95□□□□□ -0.82
SCN8A-207ENST00000551216 LINC00308Q8TCZ7 52 aa9.95□□□□□ -0.82
SCN8A-207ENST00000551216 SPATA25Q9BR10 227 aa9.95□□□□□ -0.82
SCN8A-207ENST00000551216 ANGP03950 147 aaKnown RBP9.94□□□□□ -0.82
SCN8A-207ENST00000551216 LINC00269Q8N2A0 174 aa9.94□□□□□ -0.82
SCN8A-207ENST00000551216 RETNQ9HD89 108 aa9.94□□□□□ -0.82
SCN8A-207ENST00000551216 PRR34Q9NV39 138 aa9.94□□□□□ -0.82
SCN8A-207ENST00000551216 CXCL5P42830 114 aa9.93□□□□□ -0.82
SCN8A-207ENST00000551216 LOC107984156A0A0G2JMH3 177 aa9.93□□□□□ -0.82
SCN8A-207ENST00000551216 TRBV30A0A0K0K1B3 111 aa9.93□□□□□ -0.82
SCN8A-207ENST00000551216 EIF4EBP3O60516 100 aaPredicted RBP9.93□□□□□ -0.82
SCN8A-207ENST00000551216 XCL1P47992 114 aa9.93□□□□□ -0.82
SCN8A-207ENST00000551216 C5orf38Q86SI9 138 aa9.93□□□□□ -0.82
SCN8A-207ENST00000551216 ARL17AQ8IVW1 177 aa9.93□□□□□ -0.82
SCN8A-207ENST00000551216 C11orf45Q8TAV5 145 aa9.93□□□□□ -0.82
SCN8A-207ENST00000551216 COX7A2LO14548 114 aa9.92□□□□□ -0.82
SCN8A-207ENST00000551216 Q6ZTC4 211 aa9.92□□□□□ -0.82
SCN8A-207ENST00000551216 CHCHD10Q8WYQ3 142 aaPredicted RBP9.92□□□□□ -0.82
SCN8A-207ENST00000551216 TM2D3Q9BRN9 247 aa9.92□□□□□ -0.82
SCN8A-207ENST00000551216 TRAV8-4A0A0B4J246 113 aa9.91□□□□□ -0.82
SCN8A-207ENST00000551216 A0A0J9YWU9 116 aa9.91□□□□□ -0.82
SCN8A-207ENST00000551216 C6orf226Q5I0X4 101 aa9.91□□□□□ -0.82
SCN8A-207ENST00000551216 TOMM7Q9P0U1 55 aa9.91□□□□□ -0.82
SCN8A-207ENST00000551216 H3BMG7 143 aa9.9□□□□□ -0.82
SCN8A-207ENST00000551216 K7ERU9 68 aa9.89□□□□□ -0.83
SCN8A-207ENST00000551216 COX6CP09669 75 aa9.89□□□□□ -0.83
SCN8A-207ENST00000551216 SCGB1C2P0DMR2 95 aa9.89□□□□□ -0.83
SCN8A-207ENST00000551216 PSMB2P49721 201 aa9.89□□□□□ -0.83
SCN8A-207ENST00000551216 OCIAD2Q56VL3 154 aa9.89□□□□□ -0.83
SCN8A-207ENST00000551216 MUC7Q8TAX7 377 aa9.89□□□□□ -0.83
SCN8A-207ENST00000551216 DEFB131BA0A096LNP1 70 aa9.88□□□□□ -0.83
SCN8A-207ENST00000551216 COX17Q14061 63 aa9.88□□□□□ -0.83
SCN8A-207ENST00000551216 Q1RN00 199 aa9.88□□□□□ -0.83
SCN8A-207ENST00000551216 DAND5Q8N907 189 aa9.88□□□□□ -0.83
SCN8A-207ENST00000551216 COL6A5A8TX70 2615 aa9.87□□□□□ -0.83
SCN8A-207ENST00000551216 MALP21145 153 aa9.87□□□□□ -0.83
SCN8A-207ENST00000551216 CLPSL2Q6UWE3 100 aa9.87□□□□□ -0.83
SCN8A-207ENST00000551216 PRO0461Q9UI25 63 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms