RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 KRTAP10-4P60372 401 aaPredicted RBP4.3□□□□□ -1.72
TMEM116-208ENST00000549537 TWIST1Q15672 202 aa4.3□□□□□ -1.72
TMEM116-208ENST00000549537 CLLU1Q5K131 121 aa4.3□□□□□ -1.72
TMEM116-208ENST00000549537 CLPSL2Q6UWE3 100 aa4.3□□□□□ -1.72
TMEM116-208ENST00000549537 FAM231DQ6ZW35 169 aa4.3□□□□□ -1.72
TMEM116-208ENST00000549537 SCXQ7RTU7 201 aa4.3□□□□□ -1.72
TMEM116-208ENST00000549537 LINC00269Q8N2A0 174 aa4.3□□□□□ -1.72
TMEM116-208ENST00000549537 GATD1Q8NB37 220 aa4.3□□□□□ -1.72
TMEM116-208ENST00000549537 C20orf203Q8NBC4 194 aa4.3□□□□□ -1.72
TMEM116-208ENST00000549537 GFRA4Q9GZZ7 299 aa4.3□□□□□ -1.72
TMEM116-208ENST00000549537 IGLV4-60A0A075B6I1 120 aa4.29□□□□□ -1.72
TMEM116-208ENST00000549537 TRAV26-2A0A0B4J265 109 aa4.29□□□□□ -1.72
TMEM116-208ENST00000549537 HLA-DQA1P01909 254 aa4.29□□□□□ -1.72
TMEM116-208ENST00000549537 CD164Q04900 197 aa4.29□□□□□ -1.72
TMEM116-208ENST00000549537 C14orf177Q52M58 125 aa4.29□□□□□ -1.72
TMEM116-208ENST00000549537 COMMD7Q86VX2 200 aa4.29□□□□□ -1.72
TMEM116-208ENST00000549537 CBLN2Q8IUK8 224 aa4.29□□□□□ -1.72
TMEM116-208ENST00000549537 DEFB104AQ8WTQ1 72 aa4.29□□□□□ -1.72
TMEM116-208ENST00000549537 TMEM243Q9BU79 118 aa4.29□□□□□ -1.72
TMEM116-208ENST00000549537 CHAC1Q9BUX1 264 aa4.29□□□□□ -1.72
TMEM116-208ENST00000549537 SRP19P09132 144 aaKnown RBP4.28□□□□□ -1.72
TMEM116-208ENST00000549537 REG3AQ06141 175 aa4.28□□□□□ -1.72
TMEM116-208ENST00000549537 LINC01551Q86U37 167 aa4.28□□□□□ -1.72
TMEM116-208ENST00000549537 CIRBP-AS1Q8TBR5 109 aa4.28□□□□□ -1.72
TMEM116-208ENST00000549537 RPL39LQ96EH5 51 aaKnown RBP4.28□□□□□ -1.72
TMEM116-208ENST00000549537 RNF213Q63HN8 5207 aa4.27□□□□□ -1.73
TMEM116-208ENST00000549537 IGLV10-54A0A075B6I4 117 aa4.27□□□□□ -1.73
TMEM116-208ENST00000549537 TRAV8-4A0A0B4J246 113 aa4.27□□□□□ -1.73
TMEM116-208ENST00000549537 A8MWL6 223 aa4.27□□□□□ -1.73
TMEM116-208ENST00000549537 GAS8-AS1O95177 125 aa4.27□□□□□ -1.73
TMEM116-208ENST00000549537 NCR2O95944 276 aa4.27□□□□□ -1.73
TMEM116-208ENST00000549537 HNRNPA3P51991 378 aaKnown RBP4.27□□□□□ -1.73
TMEM116-208ENST00000549537 C9orf163Q8N9P6 203 aa4.27□□□□□ -1.73
TMEM116-208ENST00000549537 SMIM7Q9BQ49 75 aa4.27□□□□□ -1.73
TMEM116-208ENST00000549537 VPS25Q9BRG1 176 aa4.27□□□□□ -1.73
TMEM116-208ENST00000549537 EIF5A2Q9GZV4 153 aaKnown RBP4.27□□□□□ -1.73
TMEM116-208ENST00000549537 TNXBP22105 4242 aa4.26□□□□□ -1.73
TMEM116-208ENST00000549537 IGLV5-45A0A087WSX0 123 aa4.26□□□□□ -1.73
TMEM116-208ENST00000549537 TRBV6-5A0A0K0K1A5 114 aa4.26□□□□□ -1.73
TMEM116-208ENST00000549537 C9JQL5 133 aa4.26□□□□□ -1.73
TMEM116-208ENST00000549537 PANO1I0J062 215 aa4.26□□□□□ -1.73
TMEM116-208ENST00000549537 RAB5BP61020 215 aa4.26□□□□□ -1.73
TMEM116-208ENST00000549537 CNBPP62633 177 aaKnown RBP4.26□□□□□ -1.73
TMEM116-208ENST00000549537 TEX261Q6UWH6 196 aa4.26□□□□□ -1.73
TMEM116-208ENST00000549537 TSKUQ8WUA8 353 aa4.26□□□□□ -1.73
TMEM116-208ENST00000549537 RNF185Q96GF1 192 aa4.26□□□□□ -1.73
TMEM116-208ENST00000549537 OSTCQ9NRP0 149 aa4.26□□□□□ -1.73
TMEM116-208ENST00000549537 V9GYV3 84 aa4.26□□□□□ -1.73
TMEM116-208ENST00000549537 A0A1B0GUT8 65 aa4.25□□□□□ -1.73
TMEM116-208ENST00000549537 SDHAF1A6NFY7 115 aa4.25□□□□□ -1.73
TMEM116-208ENST00000549537 ZNF727A8MUV8 499 aa4.25□□□□□ -1.73
TMEM116-208ENST00000549537 HIGD1CA8MV81 97 aa4.25□□□□□ -1.73
TMEM116-208ENST00000549537 M0R143 59 aa4.25□□□□□ -1.73
TMEM116-208ENST00000549537 UBE2L6O14933 153 aa4.25□□□□□ -1.73
TMEM116-208ENST00000549537 TSHBP01222 138 aa4.25□□□□□ -1.73
TMEM116-208ENST00000549537 ESDP10768 282 aa4.25□□□□□ -1.73
TMEM116-208ENST00000549537 RPS10P46783 165 aaKnown RBP4.25□□□□□ -1.73
TMEM116-208ENST00000549537 CIRBPQ14011 172 aaKnown RBP4.25□□□□□ -1.73
TMEM116-208ENST00000549537 C4orf26Q17RF5 130 aa4.25□□□□□ -1.73
TMEM116-208ENST00000549537 LINC00242Q5T6M2 205 aa4.25□□□□□ -1.73
TMEM116-208ENST00000549537 SDIM1Q6ZPB5 146 aa4.25□□□□□ -1.73
TMEM116-208ENST00000549537 Q6ZVH6 145 aa4.25□□□□□ -1.73
TMEM116-208ENST00000549537 C15orf56Q8N910 161 aa4.25□□□□□ -1.73
TMEM116-208ENST00000549537 TMEM191AQ9H0A3 160 aa4.25□□□□□ -1.73
TMEM116-208ENST00000549537 SPANXB1Q9NS25 103 aaPredicted RBP4.25□□□□□ -1.73
TMEM116-208ENST00000549537 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.24□□□□□ -1.73
TMEM116-208ENST00000549537 TGIF2-C20orf24A0A0A6YYL0 155 aa4.24□□□□□ -1.73
TMEM116-208ENST00000549537 TRBV27A0A0K0K1C4 114 aa4.24□□□□□ -1.73
TMEM116-208ENST00000549537 A0A1B0GWB2 263 aa4.24□□□□□ -1.73
TMEM116-208ENST00000549537 IGKV2-29A2NJV5 120 aaPredicted RBP4.24□□□□□ -1.73
TMEM116-208ENST00000549537 H7C423 109 aa4.24□□□□□ -1.73
TMEM116-208ENST00000549537 I3L3M4 83 aa4.24□□□□□ -1.73
TMEM116-208ENST00000549537 K7ERU9 68 aa4.24□□□□□ -1.73
TMEM116-208ENST00000549537 APCSP02743 223 aa4.24□□□□□ -1.73
TMEM116-208ENST00000549537 FGF6P10767 208 aa4.24□□□□□ -1.73
TMEM116-208ENST00000549537 RAB5AP20339 215 aa4.24□□□□□ -1.73
TMEM116-208ENST00000549537 POLR2KP53803 58 aaKnown RBP4.24□□□□□ -1.73
TMEM116-208ENST00000549537 RPL23P62829 140 aaKnown RBP4.24□□□□□ -1.73
TMEM116-208ENST00000549537 RPL18AQ02543 176 aaKnown RBP4.24□□□□□ -1.73
TMEM116-208ENST00000549537 FAM19A5Q7Z5A7 132 aaPredicted RBP4.24□□□□□ -1.73
TMEM116-208ENST00000549537 NUP35Q8NFH5 326 aa4.24□□□□□ -1.73
TMEM116-208ENST00000549537 PRSS3P2Q8NHM4 247 aa4.24□□□□□ -1.73
TMEM116-208ENST00000549537 MAP1LC3AQ9H492 121 aa4.24□□□□□ -1.73
TMEM116-208ENST00000549537 SPANXA1Q9NS26 97 aa4.24□□□□□ -1.73
TMEM116-208ENST00000549537 LRP2P98164 4655 aa4.24□□□□□ -1.73
TMEM116-208ENST00000549537 IGLV5-37A0A075B6J1 123 aa4.23□□□□□ -1.73
TMEM116-208ENST00000549537 TMEM241Q24JQ0 296 aa4.23□□□□□ -1.73
TMEM116-208ENST00000549537 C10orf25Q5T742 122 aa4.23□□□□□ -1.73
TMEM116-208ENST00000549537 AMN1Q8IY45 258 aa4.23□□□□□ -1.73
TMEM116-208ENST00000549537 NRACQ8N912 160 aa4.23□□□□□ -1.73
TMEM116-208ENST00000549537 CHCHD10Q8WYQ3 142 aaPredicted RBP4.23□□□□□ -1.73
TMEM116-208ENST00000549537 BORCS7Q96B45 105 aa4.23□□□□□ -1.73
TMEM116-208ENST00000549537 MRAP2Q96G30 205 aa4.23□□□□□ -1.73
TMEM116-208ENST00000549537 ST20Q9HBF5 79 aa4.23□□□□□ -1.73
TMEM116-208ENST00000549537 TMEM242Q9NWH2 141 aa4.23□□□□□ -1.73
TMEM116-208ENST00000549537 GVQW2A0A096LPI5 108 aaPredicted RBP4.22□□□□□ -1.73
TMEM116-208ENST00000549537 SMIM27A0A1W2PRY6 76 aa4.22□□□□□ -1.73
TMEM116-208ENST00000549537 C20orf202A1L168 122 aa4.22□□□□□ -1.73
TMEM116-208ENST00000549537 RPL32P62910 135 aaKnown RBP4.22□□□□□ -1.73
TMEM116-208ENST00000549537 AMMECR1LQ6DCA0 310 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms