RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 UBE2L6O14933 153 aa16.43■□□□□ 0.22
NPAS3-206ENST00000548645 DSCR9P59020 149 aa16.43■□□□□ 0.22
NPAS3-206ENST00000548645 IL17DQ8TAD2 202 aa16.42■□□□□ 0.22
NPAS3-206ENST00000548645 COX7B2Q8TF08 81 aa16.42■□□□□ 0.22
NPAS3-206ENST00000548645 IGKV2-28A0A075B6P5 120 aa16.42■□□□□ 0.22
NPAS3-206ENST00000548645 J3QLI3 93 aa16.42■□□□□ 0.22
NPAS3-206ENST00000548645 IGKV2D-28P01615 120 aa16.42■□□□□ 0.22
NPAS3-206ENST00000548645 H0YGX0 51 aa16.41■□□□□ 0.22
NPAS3-206ENST00000548645 C2orf48Q96LS8 159 aa16.41■□□□□ 0.22
NPAS3-206ENST00000548645 TMEM243Q9BU79 118 aa16.41■□□□□ 0.22
NPAS3-206ENST00000548645 DEFB114Q30KQ6 69 aa16.4■□□□□ 0.22
NPAS3-206ENST00000548645 SMIM11BQ8TCY0 68 aa16.4■□□□□ 0.22
NPAS3-206ENST00000548645 CRYGAP11844 174 aa16.4■□□□□ 0.22
NPAS3-206ENST00000548645 C1orf158Q8N1D5 194 aa16.4■□□□□ 0.22
NPAS3-206ENST00000548645 NRGNQ92686 78 aa16.4■□□□□ 0.22
NPAS3-206ENST00000548645 DOPEY1Q5JWR5 2465 aa16.39■□□□□ 0.22
NPAS3-206ENST00000548645 A0A087WYN8 130 aa16.39■□□□□ 0.21
NPAS3-206ENST00000548645 Q6YL49 198 aa16.39■□□□□ 0.21
NPAS3-206ENST00000548645 Q6ZTI0 123 aa16.38■□□□□ 0.21
NPAS3-206ENST00000548645 C14orf132Q9NPU4 83 aa16.38■□□□□ 0.21
NPAS3-206ENST00000548645 TOMM7Q9P0U1 55 aa16.38■□□□□ 0.21
NPAS3-206ENST00000548645 LINC00158P58513 81 aa16.37■□□□□ 0.21
NPAS3-206ENST00000548645 STHQ8IWL8 128 aa16.37■□□□□ 0.21
NPAS3-206ENST00000548645 KLK5Q9Y337 293 aaPredicted RBP16.37■□□□□ 0.21
NPAS3-206ENST00000548645 LRRC75A-AS1Q8N1F1 130 aa16.36■□□□□ 0.21
NPAS3-206ENST00000548645 BBC3Q96PG8 261 aaPredicted RBP16.36■□□□□ 0.21
NPAS3-206ENST00000548645 A0A1B0GX51 115 aa16.36■□□□□ 0.21
NPAS3-206ENST00000548645 C4orf3Q8WVX3 66 aa16.36■□□□□ 0.21
NPAS3-206ENST00000548645 RPL18AQ02543 176 aaKnown RBP16.35■□□□□ 0.21
NPAS3-206ENST00000548645 Q6JHZ5 121 aa16.35■□□□□ 0.21
NPAS3-206ENST00000548645 OBSCN-AS1Q96MR7 158 aa16.35■□□□□ 0.21
NPAS3-206ENST00000548645 CHD6Q8TD26 2715 aa16.35■□□□□ 0.21
NPAS3-206ENST00000548645 J3KT08 172 aa16.35■□□□□ 0.21
NPAS3-206ENST00000548645 KHDC1LQ5JSQ8 128 aa16.35■□□□□ 0.21
NPAS3-206ENST00000548645 C9orf129Q5T035 196 aaKnown RBP16.34■□□□□ 0.21
NPAS3-206ENST00000548645 CCL18P55774 89 aa16.34■□□□□ 0.21
NPAS3-206ENST00000548645 ODF3L2Q3SX64 289 aa16.34■□□□□ 0.21
NPAS3-206ENST00000548645 IGKV3D-7A0A0C4DH55 119 aa16.32■□□□□ 0.2
NPAS3-206ENST00000548645 LINC00846Q9NV44 126 aa16.32■□□□□ 0.2
NPAS3-206ENST00000548645 POLQO75417 2590 aa16.31■□□□□ 0.2
NPAS3-206ENST00000548645 LOC107984640A0A0U1RRK4 108 aa16.31■□□□□ 0.2
NPAS3-206ENST00000548645 IBA57-AS1B1ANH7 110 aa16.31■□□□□ 0.2
NPAS3-206ENST00000548645 LECT2O14960 151 aa16.31■□□□□ 0.2
NPAS3-206ENST00000548645 hADV29S1A0JD25 119 aa16.3■□□□□ 0.2
NPAS3-206ENST00000548645 CSMD2Q7Z408 3487 aa16.29■□□□□ 0.2
NPAS3-206ENST00000548645 MAPK1IP1LQ8NDC0 245 aa16.29■□□□□ 0.2
NPAS3-206ENST00000548645 IGKV3OR2-268A0A0C4DH90 116 aa16.29■□□□□ 0.2
NPAS3-206ENST00000548645 FSHBP01225 129 aa16.29■□□□□ 0.2
NPAS3-206ENST00000548645 NOP10Q9NPE3 64 aaKnown RBP16.28■□□□□ 0.2
NPAS3-206ENST00000548645 CELSR2Q9HCU4 2923 aa16.28■□□□□ 0.2
NPAS3-206ENST00000548645 A0A096LNT2 108 aa16.27■□□□□ 0.2
NPAS3-206ENST00000548645 TRAV25A0A0B4J276 109 aa16.27■□□□□ 0.19
NPAS3-206ENST00000548645 PAX4O43316 350 aa16.27■□□□□ 0.19
NPAS3-206ENST00000548645 RPS28P62857 69 aaKnown RBP16.27■□□□□ 0.19
NPAS3-206ENST00000548645 SERP2Q8N6R1 65 aa16.26■□□□□ 0.19
NPAS3-206ENST00000548645 OR13C6PQ8NH95 151 aa16.26■□□□□ 0.19
NPAS3-206ENST00000548645 IGHV3OR16-9A0A0B4J2B5 98 aa16.26■□□□□ 0.19
NPAS3-206ENST00000548645 NCR3O14931 201 aa16.26■□□□□ 0.19
NPAS3-206ENST00000548645 PFN2P35080 140 aa16.25■□□□□ 0.19
NPAS3-206ENST00000548645 ORMDL1Q9P0S3 153 aa16.24■□□□□ 0.19
NPAS3-206ENST00000548645 TRGV2A0A075B6R0 118 aa16.23■□□□□ 0.19
NPAS3-206ENST00000548645 A0A087WZ39 114 aa16.23■□□□□ 0.19
NPAS3-206ENST00000548645 LOC100131303A0A0U1RQF7 123 aa16.23■□□□□ 0.19
NPAS3-206ENST00000548645 TRBV6-4A0A1B0GX49 114 aa16.23■□□□□ 0.19
NPAS3-206ENST00000548645 PTPN13Q12923 2485 aa16.23■□□□□ 0.19
NPAS3-206ENST00000548645 ABCA12Q86UK0 2595 aa16.22■□□□□ 0.19
NPAS3-206ENST00000548645 C2CD3Q4AC94 2353 aa16.22■□□□□ 0.19
NPAS3-206ENST00000548645 IGLV4-60A0A075B6I1 120 aa16.22■□□□□ 0.19
NPAS3-206ENST00000548645 A0A087WVE0 104 aa16.22■□□□□ 0.19
NPAS3-206ENST00000548645 FAM19A5Q7Z5A7 132 aaPredicted RBP16.22■□□□□ 0.19
NPAS3-206ENST00000548645 SLPIP03973 132 aa16.21■□□□□ 0.19
NPAS3-206ENST00000548645 USP17L23D6RBM5 183 aa16.21■□□□□ 0.18
NPAS3-206ENST00000548645 LINC01561Q8N1V8 128 aa16.21■□□□□ 0.18
NPAS3-206ENST00000548645 USP9YO00507 2555 aaPredicted RBP16.2■□□□□ 0.18
NPAS3-206ENST00000548645 TMEM258P61165 79 aa16.2■□□□□ 0.18
NPAS3-206ENST00000548645 LY6G6DO95868 133 aa16.19■□□□□ 0.18
NPAS3-206ENST00000548645 CYSTM1Q9H1C7 97 aa16.19■□□□□ 0.18
NPAS3-206ENST00000548645 C16orf74Q96GX8 76 aa16.19■□□□□ 0.18
NPAS3-206ENST00000548645 TRBV6-8A0A0A6YYG3 113 aa16.18■□□□□ 0.18
NPAS3-206ENST00000548645 CCKP06307 115 aa16.18■□□□□ 0.18
NPAS3-206ENST00000548645 TRGV4A0A0C4DH28 118 aa16.18■□□□□ 0.18
NPAS3-206ENST00000548645 UPK3BQ9BT76 320 aa16.18■□□□□ 0.18
NPAS3-206ENST00000548645 C6orf226Q5I0X4 101 aa16.17■□□□□ 0.18
NPAS3-206ENST00000548645 S100A7L2Q5SY68 101 aa16.17■□□□□ 0.18
NPAS3-206ENST00000548645 UBR5O95071 2799 aaPredicted RBP16.17■□□□□ 0.18
NPAS3-206ENST00000548645 ZNF843Q8N446 348 aa16.16■□□□□ 0.18
NPAS3-206ENST00000548645 SS18Q15532 418 aa16.15■□□□□ 0.18
NPAS3-206ENST00000548645 PLAC8L1A1L4L8 177 aa16.15■□□□□ 0.18
NPAS3-206ENST00000548645 IGHV4-31P0DP07 118 aa16.15■□□□□ 0.18
NPAS3-206ENST00000548645 C5orf47Q569G3 176 aa16.15■□□□□ 0.18
NPAS3-206ENST00000548645 JMJD7-PLA2G4BH0Y9G9 81 aa16.14■□□□□ 0.17
NPAS3-206ENST00000548645 SMIM9A6NGZ8 99 aa16.14■□□□□ 0.17
NPAS3-206ENST00000548645 TMEM86BQ8N661 226 aa16.14■□□□□ 0.17
NPAS3-206ENST00000548645 LINC00167Q96N53 147 aa16.13■□□□□ 0.17
NPAS3-206ENST00000548645 DPH3Q96FX2 82 aa16.12■□□□□ 0.17
NPAS3-206ENST00000548645 LINC00959A0A1B0GUT2 108 aa16.12■□□□□ 0.17
NPAS3-206ENST00000548645 FBN2P35556 2912 aa16.12■□□□□ 0.17
NPAS3-206ENST00000548645 C11orf68Q9H3H3 251 aaKnown RBP16.12■□□□□ 0.17
NPAS3-206ENST00000548645 ZANQ9Y493 2812 aa16.11■□□□□ 0.17
NPAS3-206ENST00000548645 GIG44P09565 113 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms