RNA–Protein interactions for RNA: ENST00000543005.5

GTF2H3-210, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 3

Gene GTF2H3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-210ENST00000543005 SMCO4Q9NRQ5 59 aa1.55□□□□□ -2.16
GTF2H3-210ENST00000543005 PSENENQ9NZ42 101 aa1.55□□□□□ -2.16
GTF2H3-210ENST00000543005 LINC01558Q9Y6Z2 57 aa1.55□□□□□ -2.16
GTF2H3-210ENST00000543005 NCOA2Q15596 1464 aa1.55□□□□□ -2.16
GTF2H3-210ENST00000543005 UGGT2Q9NYU1 1516 aa1.55□□□□□ -2.16
GTF2H3-210ENST00000543005 FCGBPQ9Y6R7 5405 aaPredicted RBP1.55□□□□□ -2.16
GTF2H3-210ENST00000543005 H3BUT2 72 aa1.54□□□□□ -2.16
GTF2H3-210ENST00000543005 ZNF137PP52743 207 aa1.54□□□□□ -2.16
GTF2H3-210ENST00000543005 BAGE3Q86Y29 109 aa1.54□□□□□ -2.16
GTF2H3-210ENST00000543005 BAGE2Q86Y30 109 aa1.54□□□□□ -2.16
GTF2H3-210ENST00000543005 KRTAP13-1Q8IUC0 172 aa1.54□□□□□ -2.16
GTF2H3-210ENST00000543005 PRR15LQ9BU68 103 aa1.54□□□□□ -2.16
GTF2H3-210ENST00000543005 ANKARQ7Z5J8 1434 aa1.54□□□□□ -2.16
GTF2H3-210ENST00000543005 TRAV1-2A0A0B4J238 106 aa1.53□□□□□ -2.16
GTF2H3-210ENST00000543005 CTXND1A0A1B0GTU2 59 aa1.53□□□□□ -2.16
GTF2H3-210ENST00000543005 KANTRA0A1W2PQU2 76 aa1.53□□□□□ -2.16
GTF2H3-210ENST00000543005 M0R3E3 92 aa1.53□□□□□ -2.16
GTF2H3-210ENST00000543005 UQCR11O14957 56 aa1.53□□□□□ -2.16
GTF2H3-210ENST00000543005 SMIM11AP58511 58 aa1.53□□□□□ -2.16
GTF2H3-210ENST00000543005 DEFA5Q01523 94 aa1.53□□□□□ -2.16
GTF2H3-210ENST00000543005 KCPQ6ZWJ8 1503 aa1.53□□□□□ -2.16
GTF2H3-210ENST00000543005 MED13LQ71F56 2210 aa1.53□□□□□ -2.16
GTF2H3-210ENST00000543005 ABCC2Q92887 1545 aa1.53□□□□□ -2.16
GTF2H3-210ENST00000543005 PDCD5O14737 125 aa1.52□□□□□ -2.17
GTF2H3-210ENST00000543005 CFDP00746 253 aaPredicted RBP1.52□□□□□ -2.17
GTF2H3-210ENST00000543005 HMGN2P05204 90 aaKnown RBP1.52□□□□□ -2.17
GTF2H3-210ENST00000543005 C10orf99Q6UWK7 81 aa1.52□□□□□ -2.17
GTF2H3-210ENST00000543005 LINC00643Q86TS7 51 aa1.52□□□□□ -2.17
GTF2H3-210ENST00000543005 NCOA6Q14686 2063 aaPredicted RBP1.52□□□□□ -2.17
GTF2H3-210ENST00000543005 RGPD2P0DJD1 1756 aa1.52□□□□□ -2.17
GTF2H3-210ENST00000543005 KDM3BQ7LBC6 1761 aa1.52□□□□□ -2.17
GTF2H3-210ENST00000543005 ABCC1P33527 1531 aa1.51□□□□□ -2.17
GTF2H3-210ENST00000543005 TRBV30A0A0K0K1B3 111 aa1.51□□□□□ -2.17
GTF2H3-210ENST00000543005 C7orf77A4D0Y5 90 aa1.51□□□□□ -2.17
GTF2H3-210ENST00000543005 IQCF6A8MYZ5 107 aa1.51□□□□□ -2.17
GTF2H3-210ENST00000543005 ARMS2P0C7Q2 107 aa1.51□□□□□ -2.17
GTF2H3-210ENST00000543005 ACYP2P14621 99 aa1.51□□□□□ -2.17
GTF2H3-210ENST00000543005 FDCSPQ8NFU4 85 aa1.51□□□□□ -2.17
GTF2H3-210ENST00000543005 RGPD8O14715 1765 aaPredicted RBP1.51□□□□□ -2.17
GTF2H3-210ENST00000543005 RGPD5Q99666 1765 aa1.51□□□□□ -2.17
GTF2H3-210ENST00000543005 CACNA1BQ00975 2339 aa1.51□□□□□ -2.17
GTF2H3-210ENST00000543005 SDK1Q7Z5N4 2213 aa1.51□□□□□ -2.17
GTF2H3-210ENST00000543005 LRRC9Q6ZRR7 1453 aa1.5□□□□□ -2.17
GTF2H3-210ENST00000543005 A0A087WVE0 104 aa1.5□□□□□ -2.17
GTF2H3-210ENST00000543005 ACYP1P07311 99 aa1.5□□□□□ -2.17
GTF2H3-210ENST00000543005 C18orf32Q8TCD1 76 aa1.5□□□□□ -2.17
GTF2H3-210ENST00000543005 SPRR4Q96PI1 79 aa1.5□□□□□ -2.17
GTF2H3-210ENST00000543005 LINC00472Q9H8W2 130 aa1.5□□□□□ -2.17
GTF2H3-210ENST00000543005 ZFHX3Q15911 3703 aa1.5□□□□□ -2.17
GTF2H3-210ENST00000543005 ARFGEF2Q9Y6D5 1785 aa1.49□□□□□ -2.17
GTF2H3-210ENST00000543005 KNDC1Q76NI1 1749 aa1.49□□□□□ -2.17
GTF2H3-210ENST00000543005 ABCA1O95477 2261 aa1.49□□□□□ -2.17
GTF2H3-210ENST00000543005 NHSL1Q5SYE7 1610 aa1.49□□□□□ -2.17
GTF2H3-210ENST00000543005 A0A096LNT2 108 aa1.49□□□□□ -2.17
GTF2H3-210ENST00000543005 A0A1B0GWA3 101 aa1.49□□□□□ -2.17
GTF2H3-210ENST00000543005 NCR3O14931 201 aa1.49□□□□□ -2.17
GTF2H3-210ENST00000543005 LINC00575Q6W349 94 aa1.49□□□□□ -2.17
GTF2H3-210ENST00000543005 PROK2Q9HC23 129 aa1.49□□□□□ -2.17
GTF2H3-210ENST00000543005 SSC5DA1L4H1 1573 aa1.49□□□□□ -2.17
GTF2H3-210ENST00000543005 SCN11AQ9UI33 1791 aa1.49□□□□□ -2.17
GTF2H3-210ENST00000543005 MROH1Q8NDA8 1641 aa1.48□□□□□ -2.17
GTF2H3-210ENST00000543005 RAPGEF6Q8TEU7 1601 aa1.48□□□□□ -2.17
GTF2H3-210ENST00000543005 MYMXA0A1B0GTQ4 84 aa1.48□□□□□ -2.17
GTF2H3-210ENST00000543005 LY6G6CO95867 125 aa1.48□□□□□ -2.17
GTF2H3-210ENST00000543005 PRB1P04280 392 aa1.48□□□□□ -2.17
GTF2H3-210ENST00000543005 MGPP08493 103 aa1.48□□□□□ -2.17
GTF2H3-210ENST00000543005 SPINT3P49223 89 aa1.48□□□□□ -2.17
GTF2H3-210ENST00000543005 CUX1P39880 1505 aa1.48□□□□□ -2.17
GTF2H3-210ENST00000543005 MAGI3Q5TCQ9 1506 aa1.48□□□□□ -2.17
GTF2H3-210ENST00000543005 CRYBG1Q9Y4K1 1723 aa1.48□□□□□ -2.17
GTF2H3-210ENST00000543005 SHPRHQ149N8 1683 aa1.48□□□□□ -2.17
GTF2H3-210ENST00000543005 MADDQ8WXG6 1647 aa1.48□□□□□ -2.17
GTF2H3-210ENST00000543005 LEPROTL1O95214 131 aa1.47□□□□□ -2.17
GTF2H3-210ENST00000543005 HMGN3Q15651 99 aa1.47□□□□□ -2.17
GTF2H3-210ENST00000543005 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.47□□□□□ -2.17
GTF2H3-210ENST00000543005 PLAC8Q9NZF1 115 aa1.47□□□□□ -2.17
GTF2H3-210ENST00000543005 ALKQ9UM73 1620 aa1.47□□□□□ -2.17
GTF2H3-210ENST00000543005 GVQW2A0A096LPI5 108 aaPredicted RBP1.46□□□□□ -2.18
GTF2H3-210ENST00000543005 G3V318 75 aa1.46□□□□□ -2.18
GTF2H3-210ENST00000543005 KRTAP12-3P60328 96 aa1.46□□□□□ -2.18
GTF2H3-210ENST00000543005 COX17Q14061 63 aa1.46□□□□□ -2.18
GTF2H3-210ENST00000543005 PLGLAQ15195 96 aa1.46□□□□□ -2.18
GTF2H3-210ENST00000543005 SMIM4Q8WVI0 70 aa1.46□□□□□ -2.18
GTF2H3-210ENST00000543005 TARBP1Q13395 1621 aaKnown RBP1.46□□□□□ -2.18
GTF2H3-210ENST00000543005 INO80Q9ULG1 1556 aaPredicted RBP1.46□□□□□ -2.18
GTF2H3-210ENST00000543005 ITSN1Q15811 1721 aa1.46□□□□□ -2.18
GTF2H3-210ENST00000543005 F5P12259 2224 aa1.46□□□□□ -2.18
GTF2H3-210ENST00000543005 ASCC3Q8N3C0 2202 aaKnown RBP1.46□□□□□ -2.18
GTF2H3-210ENST00000543005 C5P01031 1676 aa1.45□□□□□ -2.18
GTF2H3-210ENST00000543005 D6R8Y8 96 aa1.45□□□□□ -2.18
GTF2H3-210ENST00000543005 KRTAP12-4P60329 112 aa1.45□□□□□ -2.18
GTF2H3-210ENST00000543005 HEPN1Q6WQI6 88 aa1.45□□□□□ -2.18
GTF2H3-210ENST00000543005 MUSTN1Q8IVN3 82 aa1.45□□□□□ -2.18
GTF2H3-210ENST00000543005 PLAC4Q8WY50 150 aa1.45□□□□□ -2.18
GTF2H3-210ENST00000543005 LINC00846Q9NV44 126 aa1.45□□□□□ -2.18
GTF2H3-210ENST00000543005 CEP170BQ9Y4F5 1589 aaPredicted RBP1.45□□□□□ -2.18
GTF2H3-210ENST00000543005 LRRC37A2A6NM11 1700 aa1.45□□□□□ -2.18
GTF2H3-210ENST00000543005 ANKRD36A6QL64 1941 aa1.44□□□□□ -2.18
GTF2H3-210ENST00000543005 PAPPA2Q9BXP8 1791 aa1.44□□□□□ -2.18
GTF2H3-210ENST00000543005 SETBP1Q9Y6X0 1596 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms