RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 CACNA1AO00555 2505 aa9.56□□□□□ -0.88
TNC-212ENST00000542877 C10orf142B7Z368 130 aa9.56□□□□□ -0.88
TNC-212ENST00000542877 TRAV10A0A0B4J240 114 aa9.56□□□□□ -0.88
TNC-212ENST00000542877 LINC00242Q5T6M2 205 aa9.56□□□□□ -0.88
TNC-212ENST00000542877 COX8CQ7Z4L0 72 aa9.55□□□□□ -0.88
TNC-212ENST00000542877 SONP18583 2426 aaKnown RBP9.55□□□□□ -0.88
TNC-212ENST00000542877 LINC01006Q8NI28 216 aa9.55□□□□□ -0.88
TNC-212ENST00000542877 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.55□□□□□ -0.88
TNC-212ENST00000542877 LINC00526Q96FQ7 95 aa9.54□□□□□ -0.88
TNC-212ENST00000542877 KPRPQ5T749 579 aaPredicted RBP9.54□□□□□ -0.88
TNC-212ENST00000542877 PTPN13Q12923 2485 aa9.54□□□□□ -0.88
TNC-212ENST00000542877 PRM2P04554 102 aa9.54□□□□□ -0.88
TNC-212ENST00000542877 C18orf65Q6ZTR6 163 aa9.54□□□□□ -0.88
TNC-212ENST00000542877 A0A0U1RQV1 116 aa9.54□□□□□ -0.88
TNC-212ENST00000542877 INAFM1C9JVW0 142 aa9.54□□□□□ -0.88
TNC-212ENST00000542877 PRR15LQ9BU68 103 aa9.54□□□□□ -0.88
TNC-212ENST00000542877 OTOGLQ3ZCN5 2332 aa9.53□□□□□ -0.88
TNC-212ENST00000542877 SHISA2Q6UWI4 295 aa9.53□□□□□ -0.88
TNC-212ENST00000542877 NTM-AS1Q6ZSK4 140 aa9.53□□□□□ -0.88
TNC-212ENST00000542877 WFDC10AQ9H1F0 79 aa9.53□□□□□ -0.88
TNC-212ENST00000542877 NAV3Q8IVL0 2385 aa9.52□□□□□ -0.88
TNC-212ENST00000542877 RPL28P46779 137 aaKnown RBP9.52□□□□□ -0.88
TNC-212ENST00000542877 WFDC13Q8IUB5 93 aa9.52□□□□□ -0.88
TNC-212ENST00000542877 SMIM1B2RUZ4 78 aa9.52□□□□□ -0.89
TNC-212ENST00000542877 C2CD3Q4AC94 2353 aa9.52□□□□□ -0.89
TNC-212ENST00000542877 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.52□□□□□ -0.89
TNC-212ENST00000542877 PRO3102Q9H379 93 aa9.52□□□□□ -0.89
TNC-212ENST00000542877 ZNF706Q9Y5V0 76 aaPredicted RBP9.52□□□□□ -0.89
TNC-212ENST00000542877 LOC107984640A0A0U1RRK4 108 aa9.51□□□□□ -0.89
TNC-212ENST00000542877 CRIP2P52943 208 aaPredicted RBP9.51□□□□□ -0.89
TNC-212ENST00000542877 CLUHP3Q96NS8 147 aa9.51□□□□□ -0.89
TNC-212ENST00000542877 CYSRT1A8MQ03 144 aa9.51□□□□□ -0.89
TNC-212ENST00000542877 K7ERS5 55 aa9.5□□□□□ -0.89
TNC-212ENST00000542877 CHCHD7Q9BUK0 85 aa9.5□□□□□ -0.89
TNC-212ENST00000542877 TRAV7A0A075B6U4 112 aa9.49□□□□□ -0.89
TNC-212ENST00000542877 TSPEAR-AS2P59090 65 aa9.49□□□□□ -0.89
TNC-212ENST00000542877 ZNF843Q8N446 348 aa9.49□□□□□ -0.89
TNC-212ENST00000542877 A0A096LNJ9 63 aa9.49□□□□□ -0.89
TNC-212ENST00000542877 Q8N814 137 aa9.49□□□□□ -0.89
TNC-212ENST00000542877 SMIM26A0A096LP01 95 aa9.48□□□□□ -0.89
TNC-212ENST00000542877 AMELXQ99217 191 aa9.48□□□□□ -0.89
TNC-212ENST00000542877 PPDPFQ9H3Y8 114 aa9.48□□□□□ -0.89
TNC-212ENST00000542877 ARHGAP32A7KAX9 2087 aa9.48□□□□□ -0.89
TNC-212ENST00000542877 ODF3L2Q3SX64 289 aa9.48□□□□□ -0.89
TNC-212ENST00000542877 Q8N9L7 120 aa9.48□□□□□ -0.89
TNC-212ENST00000542877 BRI3O95415 125 aa9.48□□□□□ -0.89
TNC-212ENST00000542877 LINC00694P0DN24 101 aa9.48□□□□□ -0.89
TNC-212ENST00000542877 CSDC2Q9Y534 153 aaKnown RBP9.48□□□□□ -0.89
TNC-212ENST00000542877 C7orf33Q8WU49 177 aa9.47□□□□□ -0.89
TNC-212ENST00000542877 CEP192Q8TEP8 1941 aa9.47□□□□□ -0.89
TNC-212ENST00000542877 LRCOL1A6NCL2 159 aa9.47□□□□□ -0.89
TNC-212ENST00000542877 EML5Q05BV3 1969 aa9.47□□□□□ -0.89
TNC-212ENST00000542877 RPL37AP8A6NKH3 93 aa9.47□□□□□ -0.89
TNC-212ENST00000542877 IGLV2-18A0A075B6J9 118 aa9.46□□□□□ -0.89
TNC-212ENST00000542877 EGFEM1PQ0D2K5 195 aa9.46□□□□□ -0.89
TNC-212ENST00000542877 A0A0J9YWU9 116 aa9.46□□□□□ -0.9
TNC-212ENST00000542877 A6NED7 52 aa9.46□□□□□ -0.9
TNC-212ENST00000542877 COX6A2Q02221 97 aa9.45□□□□□ -0.9
TNC-212ENST00000542877 UNQ6190/PRO20217Q6UXQ8 127 aa9.45□□□□□ -0.9
TNC-212ENST00000542877 NAV2Q8IVL1 2488 aa9.45□□□□□ -0.9
TNC-212ENST00000542877 LY6G6DO95868 133 aa9.45□□□□□ -0.9
TNC-212ENST00000542877 EDN2P20800 178 aa9.45□□□□□ -0.9
TNC-212ENST00000542877 PRR4Q16378 134 aa9.45□□□□□ -0.9
TNC-212ENST00000542877 FAM30AQ9NZY2 134 aa9.45□□□□□ -0.9
TNC-212ENST00000542877 ADAMTSL4-AS1Q5T5F5 129 aa9.45□□□□□ -0.9
TNC-212ENST00000542877 SERP1Q9Y6X1 66 aa9.45□□□□□ -0.9
TNC-212ENST00000542877 AVPP01185 164 aa9.44□□□□□ -0.9
TNC-212ENST00000542877 SPINK6Q6UWN8 80 aa9.44□□□□□ -0.9
TNC-212ENST00000542877 A0A087WYN8 130 aa9.43□□□□□ -0.9
TNC-212ENST00000542877 LRP4O75096 1905 aa9.43□□□□□ -0.9
TNC-212ENST00000542877 ZNF580Q9UK33 172 aa9.43□□□□□ -0.9
TNC-212ENST00000542877 M0QXV9 152 aa9.43□□□□□ -0.9
TNC-212ENST00000542877 LINC00474Q9P2X8 69 aa9.43□□□□□ -0.9
TNC-212ENST00000542877 MYO18BQ8IUG5 2567 aa9.43□□□□□ -0.9
TNC-212ENST00000542877 TRBV10-3A0A0K0K1G6 114 aa9.42□□□□□ -0.9
TNC-212ENST00000542877 HIVEP3Q5T1R4 2406 aa9.42□□□□□ -0.9
TNC-212ENST00000542877 CDSNQ15517 529 aa9.42□□□□□ -0.9
TNC-212ENST00000542877 A0A087WVE0 104 aa9.42□□□□□ -0.9
TNC-212ENST00000542877 PLAC8L1A1L4L8 177 aa9.42□□□□□ -0.9
TNC-212ENST00000542877 IGLV4-60A0A075B6I1 120 aa9.41□□□□□ -0.9
TNC-212ENST00000542877 BEAN1Q3B7T3 259 aa9.41□□□□□ -0.9
TNC-212ENST00000542877 C1orf137Q5JT78 98 aa9.4□□□□□ -0.9
TNC-212ENST00000542877 CELA1Q9UNI1 258 aa9.4□□□□□ -0.9
TNC-212ENST00000542877 IGLV1-51P01701 117 aa9.4□□□□□ -0.9
TNC-212ENST00000542877 C9orf116Q5BN46 136 aaPredicted RBP9.4□□□□□ -0.9
TNC-212ENST00000542877 FHL2Q14192 279 aa9.39□□□□□ -0.91
TNC-212ENST00000542877 C10orf25Q5T742 122 aa9.39□□□□□ -0.91
TNC-212ENST00000542877 HRCT1Q6UXD1 115 aa9.39□□□□□ -0.91
TNC-212ENST00000542877 C1orf195Q5TG92 126 aa9.39□□□□□ -0.91
TNC-212ENST00000542877 IGHV4-30-4P0DP06 118 aa9.39□□□□□ -0.91
TNC-212ENST00000542877 IGLV9-49A0A0B4J1Y8 123 aa9.38□□□□□ -0.91
TNC-212ENST00000542877 NANOS2P60321 138 aaKnown RBP9.38□□□□□ -0.91
TNC-212ENST00000542877 PRR3P79522 188 aaKnown RBP9.37□□□□□ -0.91
TNC-212ENST00000542877 Q8N3U1 123 aa9.36□□□□□ -0.91
TNC-212ENST00000542877 PTPRSQ13332 1948 aa9.36□□□□□ -0.91
TNC-212ENST00000542877 A0A1B0GUV1 79 aa9.36□□□□□ -0.91
TNC-212ENST00000542877 PRYO14603 147 aa9.36□□□□□ -0.91
TNC-212ENST00000542877 LINC01561Q8N1V8 128 aa9.36□□□□□ -0.91
TNC-212ENST00000542877 CCDC168Q8NDH2 2452 aa9.36□□□□□ -0.91
TNC-212ENST00000542877 F8WDY8 70 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms