RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 SPANXCQ9NY87 97 aa9.85□□□□□ -0.83
LDB3-207ENST00000542786 TSPAN13O95857 204 aa9.84□□□□□ -0.83
LDB3-207ENST00000542786 PRIMA1Q86XR5 153 aa9.84□□□□□ -0.83
LDB3-207ENST00000542786 MUSTN1Q8IVN3 82 aa9.84□□□□□ -0.83
LDB3-207ENST00000542786 CHCHD5Q9BSY4 110 aa9.84□□□□□ -0.83
LDB3-207ENST00000542786 PGPEP1Q9NXJ5 209 aa9.84□□□□□ -0.83
LDB3-207ENST00000542786 A4D1N5 150 aa9.83□□□□□ -0.84
LDB3-207ENST00000542786 PAX4O43316 350 aa9.83□□□□□ -0.84
LDB3-207ENST00000542786 FBN1P35555 2871 aaKnown RBP9.83□□□□□ -0.84
LDB3-207ENST00000542786 DAD1P61803 113 aa9.83□□□□□ -0.84
LDB3-207ENST00000542786 SHISA2Q6UWI4 295 aa9.83□□□□□ -0.84
LDB3-207ENST00000542786 ZNF625Q96I27 306 aaPredicted RBP9.83□□□□□ -0.84
LDB3-207ENST00000542786 APOMO95445 188 aa9.82□□□□□ -0.84
LDB3-207ENST00000542786 MIAQ16674 131 aa9.82□□□□□ -0.84
LDB3-207ENST00000542786 A0A0B4J2C4 111 aa9.81□□□□□ -0.84
LDB3-207ENST00000542786 A0A1B0GUV1 79 aa9.81□□□□□ -0.84
LDB3-207ENST00000542786 ATP5G1P05496 136 aa9.81□□□□□ -0.84
LDB3-207ENST00000542786 SPART-AS1P0CW21 52 aa9.81□□□□□ -0.84
LDB3-207ENST00000542786 IGHV3OR16-9A0A0B4J2B5 98 aa9.8□□□□□ -0.84
LDB3-207ENST00000542786 RBX1P62877 108 aa9.8□□□□□ -0.84
LDB3-207ENST00000542786 RPL24P83731 157 aaKnown RBP9.8□□□□□ -0.84
LDB3-207ENST00000542786 C3orf56Q8N813 242 aa9.8□□□□□ -0.84
LDB3-207ENST00000542786 STAB1Q9NY15 2570 aa9.79□□□□□ -0.84
LDB3-207ENST00000542786 TRAV26-1A0A087WT03 109 aa9.79□□□□□ -0.84
LDB3-207ENST00000542786 Q9H8V8 135 aa9.79□□□□□ -0.84
LDB3-207ENST00000542786 IGHV3-33P01772 117 aa9.79□□□□□ -0.84
LDB3-207ENST00000542786 PRO1854Q9UHT4 67 aa9.79□□□□□ -0.84
LDB3-207ENST00000542786 A0A096LPF7 62 aa9.78□□□□□ -0.84
LDB3-207ENST00000542786 LINC00959A0A1B0GUT2 108 aa9.77□□□□□ -0.85
LDB3-207ENST00000542786 RETNQ9HD89 108 aa9.77□□□□□ -0.85
LDB3-207ENST00000542786 PRO0461Q9UI25 63 aa9.77□□□□□ -0.85
LDB3-207ENST00000542786 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.76□□□□□ -0.85
LDB3-207ENST00000542786 A0A087WZ39 114 aa9.76□□□□□ -0.85
LDB3-207ENST00000542786 IFITM1P13164 125 aa9.76□□□□□ -0.85
LDB3-207ENST00000542786 IGKV3OR2-268A0A0C4DH90 116 aa9.74□□□□□ -0.85
LDB3-207ENST00000542786 TEX48A0A1B0GUV7 120 aa9.74□□□□□ -0.85
LDB3-207ENST00000542786 PRSS2P07478 247 aa9.74□□□□□ -0.85
LDB3-207ENST00000542786 OCIAD2Q56VL3 154 aa9.74□□□□□ -0.85
LDB3-207ENST00000542786 H3BMG7 143 aa9.74□□□□□ -0.85
LDB3-207ENST00000542786 HERV-K104P63124 156 aa9.74□□□□□ -0.85
LDB3-207ENST00000542786 Q8N3U1 123 aa9.74□□□□□ -0.85
LDB3-207ENST00000542786 DAND5Q8N907 189 aa9.74□□□□□ -0.85
LDB3-207ENST00000542786 COX7B2Q8TF08 81 aa9.74□□□□□ -0.85
LDB3-207ENST00000542786 CMYA5Q8N3K9 4069 aa9.73□□□□□ -0.85
LDB3-207ENST00000542786 MRPL23Q16540 153 aaKnown RBP9.73□□□□□ -0.85
LDB3-207ENST00000542786 SOSTDC1Q6X4U4 206 aa9.73□□□□□ -0.85
LDB3-207ENST00000542786 LINC00308Q8TCZ7 52 aa9.73□□□□□ -0.85
LDB3-207ENST00000542786 DNAH3Q8TD57 4116 aa9.73□□□□□ -0.85
LDB3-207ENST00000542786 TMEM262E9PQX1 116 aa9.72□□□□□ -0.85
LDB3-207ENST00000542786 G3V4G9 280 aa9.72□□□□□ -0.85
LDB3-207ENST00000542786 SFTA2Q6UW10 78 aa9.72□□□□□ -0.85
LDB3-207ENST00000542786 PPDPFQ9H3Y8 114 aa9.72□□□□□ -0.85
LDB3-207ENST00000542786 PKD1L1Q8TDX9 2849 aa9.72□□□□□ -0.85
LDB3-207ENST00000542786 C11orf68Q9H3H3 251 aaKnown RBP9.72□□□□□ -0.85
LDB3-207ENST00000542786 ICOSQ9Y6W8 199 aa9.72□□□□□ -0.85
LDB3-207ENST00000542786 HTN3P15516 51 aa9.71□□□□□ -0.85
LDB3-207ENST00000542786 NPC2P61916 151 aa9.71□□□□□ -0.85
LDB3-207ENST00000542786 CIRBPQ14011 172 aaKnown RBP9.71□□□□□ -0.85
LDB3-207ENST00000542786 SH2D6Q7Z4S9 175 aa9.71□□□□□ -0.85
LDB3-207ENST00000542786 C5orf38Q86SI9 138 aa9.71□□□□□ -0.85
LDB3-207ENST00000542786 ERG28Q9UKR5 140 aa9.71□□□□□ -0.85
LDB3-207ENST00000542786 LOC107984156A0A0G2JMH3 177 aa9.7□□□□□ -0.86
LDB3-207ENST00000542786 F8W1H4 67 aa9.7□□□□□ -0.86
LDB3-207ENST00000542786 WFDC2Q14508 124 aa9.7□□□□□ -0.86
LDB3-207ENST00000542786 LELP1Q5T871 98 aa9.7□□□□□ -0.86
LDB3-207ENST00000542786 ARL17AQ8IVW1 177 aa9.7□□□□□ -0.86
LDB3-207ENST00000542786 LINC01561Q8N1V8 128 aa9.7□□□□□ -0.86
LDB3-207ENST00000542786 TCL1BO95988 128 aa9.7□□□□□ -0.86
LDB3-207ENST00000542786 SS18Q15532 418 aa9.7□□□□□ -0.86
LDB3-207ENST00000542786 LYRM7Q5U5X0 104 aa9.7□□□□□ -0.86
LDB3-207ENST00000542786 SMCPP49901 116 aaPredicted RBP9.69□□□□□ -0.86
LDB3-207ENST00000542786 CLPSL2Q6UWE3 100 aa9.69□□□□□ -0.86
LDB3-207ENST00000542786 LINC00269Q8N2A0 174 aa9.69□□□□□ -0.86
LDB3-207ENST00000542786 H3BNG1 76 aa9.68□□□□□ -0.86
LDB3-207ENST00000542786 XCL1P47992 114 aa9.68□□□□□ -0.86
LDB3-207ENST00000542786 TRBV20-1A0A075B6N2 111 aa9.68□□□□□ -0.86
LDB3-207ENST00000542786 PSMB2P49721 201 aa9.68□□□□□ -0.86
LDB3-207ENST00000542786 MEIG1Q5JSS6 88 aa9.68□□□□□ -0.86
LDB3-207ENST00000542786 TRBV30A0A0K0K1B3 111 aa9.67□□□□□ -0.86
LDB3-207ENST00000542786 A0A0U1RRA0 63 aa9.67□□□□□ -0.86
LDB3-207ENST00000542786 H7C2G1 150 aa9.67□□□□□ -0.86
LDB3-207ENST00000542786 TOMM7Q9P0U1 55 aa9.67□□□□□ -0.86
LDB3-207ENST00000542786 TENM3Q9P273 2699 aa9.67□□□□□ -0.86
LDB3-207ENST00000542786 TRIAP1O43715 76 aa9.66□□□□□ -0.86
LDB3-207ENST00000542786 MTURNQ8N3F0 131 aa9.66□□□□□ -0.86
LDB3-207ENST00000542786 REG3AQ06141 175 aa9.66□□□□□ -0.86
LDB3-207ENST00000542786 CD164L2Q6UWJ8 174 aa9.66□□□□□ -0.86
LDB3-207ENST00000542786 LYPD5Q6UWN5 251 aa9.66□□□□□ -0.86
LDB3-207ENST00000542786 Q6ZTC4 211 aa9.66□□□□□ -0.86
LDB3-207ENST00000542786 COL6A5A8TX70 2615 aa9.65□□□□□ -0.86
LDB3-207ENST00000542786 CHCHD10Q8WYQ3 142 aaPredicted RBP9.65□□□□□ -0.86
LDB3-207ENST00000542786 PRR34Q9NV39 138 aa9.65□□□□□ -0.86
LDB3-207ENST00000542786 IBA57-AS1B1ANH7 110 aa9.64□□□□□ -0.87
LDB3-207ENST00000542786 K7ERU9 68 aa9.64□□□□□ -0.87
LDB3-207ENST00000542786 ANGP03950 147 aaKnown RBP9.64□□□□□ -0.87
LDB3-207ENST00000542786 KIAA0087Q14695 138 aa9.64□□□□□ -0.87
LDB3-207ENST00000542786 Q8IZM0 81 aa9.64□□□□□ -0.87
LDB3-207ENST00000542786 COPS9Q8WXC6 57 aa9.64□□□□□ -0.87
LDB3-207ENST00000542786 RPL13AP40429 203 aaKnown RBP9.64□□□□□ -0.87
LDB3-207ENST00000542786 FOXI1Q12951 378 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms